RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 TNMDQ9H2S6 317 aa22.14■■□□□ 1.13
PKD2-201ENST00000237596 TNRQ92752 1358 aa22.14■■□□□ 1.13
PKD2-201ENST00000237596 SMARCA5O60264 1052 aaPredicted RBP22.14■■□□□ 1.13
PKD2-201ENST00000237596 CCDC192P0DO97 292 aa22.14■■□□□ 1.13
PKD2-201ENST00000237596 ANKIB1Q9P2G1 1089 aa22.14■■□□□ 1.13
PKD2-201ENST00000237596 ZNF287Q9HBT7 754 aa22.13■■□□□ 1.13
PKD2-201ENST00000237596 FLIIQ13045 1269 aa22.13■■□□□ 1.13
PKD2-201ENST00000237596 NSD2O96028 1365 aa22.13■■□□□ 1.13
PKD2-201ENST00000237596 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
PKD2-201ENST00000237596 CASTP20810 708 aaKnown RBP22.13■■□□□ 1.13
PKD2-201ENST00000237596 CFAP45Q9UL16 551 aa22.13■■□□□ 1.13
PKD2-201ENST00000237596 LRRFIP2Q9Y608 721 aaKnown RBP22.12■■□□□ 1.13
PKD2-201ENST00000237596 SYCP1Q15431 976 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 WASF1Q92558 559 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 HSP90AB2PQ58FF8 381 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 CAGE1Q8TC20 777 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 SSBP05455 408 aaKnown RBP eCLIP22.12■■□□□ 1.13
PKD2-201ENST00000237596 USP5P45974 858 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 PIBF1Q8WXW3 757 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 SPATA32Q96LK8 384 aa22.12■■□□□ 1.13
PKD2-201ENST00000237596 SERPINC1P01008 464 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.11■■□□□ 1.13
PKD2-201ENST00000237596 BMP2KQ9NSY1 1161 aaPredicted RBP22.11■■□□□ 1.13
PKD2-201ENST00000237596 MINDY4BA8MYZ0 360 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 GPTP24298 496 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 CDR1P51861 262 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 CHRNA2Q15822 529 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 TEX13AQ9BXU3 409 aaPredicted RBP22.11■■□□□ 1.13
PKD2-201ENST00000237596 DACH1Q9UI36 760 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
PKD2-201ENST00000237596 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
PKD2-201ENST00000237596 NAPBQ9H115 298 aa22.1■■□□□ 1.13
PKD2-201ENST00000237596 ZNHIT6Q9NWK9 470 aaKnown RBP22.1■■□□□ 1.13
PKD2-201ENST00000237596 RPRD2Q5VT52 1461 aaKnown RBP22.1■■□□□ 1.13
PKD2-201ENST00000237596 ANKRD18BA2A2Z9 1011 aa22.1■■□□□ 1.13
PKD2-201ENST00000237596 POLR3DP05423 398 aaPredicted RBP22.1■■□□□ 1.13
PKD2-201ENST00000237596 DDX11Q96FC9 970 aa22.1■■□□□ 1.13
PKD2-201ENST00000237596 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
PKD2-201ENST00000237596 UPF3BQ9BZI7 483 aaKnown RBP22.1■■□□□ 1.13
PKD2-201ENST00000237596 ACBD3Q9H3P7 528 aa22.1■■□□□ 1.13
PKD2-201ENST00000237596 PDIA4P13667 645 aaKnown RBP22.09■■□□□ 1.13
PKD2-201ENST00000237596 DZIP1Q86YF9 867 aaKnown RBP22.09■■□□□ 1.13
PKD2-201ENST00000237596 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
PKD2-201ENST00000237596 MKNK2Q9HBH9 465 aa22.09■■□□□ 1.13
PKD2-201ENST00000237596 PRPF40BQ6NWY9 871 aaKnown RBP22.09■■□□□ 1.13
PKD2-201ENST00000237596 SLC5A1P13866 664 aa22.08■■□□□ 1.13
PKD2-201ENST00000237596 CIZ1Q9ULV3 898 aaPredicted RBP22.08■■□□□ 1.13
PKD2-201ENST00000237596 ZNF76P36508 570 aa22.08■■□□□ 1.13
PKD2-201ENST00000237596 CRACR2BQ8N4Y2 399 aaPredicted RBP22.08■■□□□ 1.13
PKD2-201ENST00000237596 PDCL3Q9H2J4 239 aa22.08■■□□□ 1.13
PKD2-201ENST00000237596 KDM5BQ9UGL1 1544 aa22.08■■□□□ 1.13
PKD2-201ENST00000237596 TEX35Q5T0J7 233 aa22.08■■□□□ 1.12
PKD2-201ENST00000237596 PTPRCP08575 1304 aa22.08■■□□□ 1.12
PKD2-201ENST00000237596 HSP90B2PQ58FF3 399 aa22.08■■□□□ 1.12
PKD2-201ENST00000237596 C20orf194Q5TEA3 1177 aa22.08■■□□□ 1.12
PKD2-201ENST00000237596 SKAP1Q86WV1 359 aa22.08■■□□□ 1.12
PKD2-201ENST00000237596 MPHOSPH10O00566 681 aaKnown RBP22.07■■□□□ 1.12
PKD2-201ENST00000237596 KRI1Q8N9T8 703 aaKnown RBP22.07■■□□□ 1.12
PKD2-201ENST00000237596 AK7Q96M32 723 aa22.07■■□□□ 1.12
PKD2-201ENST00000237596 RDXP35241 583 aaKnown RBP22.07■■□□□ 1.12
PKD2-201ENST00000237596 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
PKD2-201ENST00000237596 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
PKD2-201ENST00000237596 TRIM27P14373 513 aa22.06■■□□□ 1.12
PKD2-201ENST00000237596 BCL11BQ9C0K0 894 aaPredicted RBP22.06■■□□□ 1.12
PKD2-201ENST00000237596 TANGO6Q9C0B7 1094 aa22.06■■□□□ 1.12
PKD2-201ENST00000237596 PPFIBP1Q86W92 1011 aa22.05■■□□□ 1.12
PKD2-201ENST00000237596 MAP3K2Q9Y2U5 619 aa22.05■■□□□ 1.12
PKD2-201ENST00000237596 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
PKD2-201ENST00000237596 SPC24Q8NBT2 197 aa22.05■■□□□ 1.12
PKD2-201ENST00000237596 CCP110O43303 1012 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 PRKCSHP14314 528 aaPredicted RBP22.04■■□□□ 1.12
PKD2-201ENST00000237596 LDHAL6AQ6ZMR3 332 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 MSH6P52701 1360 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 ATP5J2-PTCD1G3V325 749 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
PKD2-201ENST00000237596 FERMT3Q86UX7 667 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 PAF1Q8N7H5 531 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 ANKRD36BQ8N2N9 1353 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 DISP3Q9P2K9 1392 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 CCDC196A0A1B0GTZ2 297 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 SNRPA1P09661 255 aaKnown RBP22.03■■□□□ 1.12
PKD2-201ENST00000237596 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
PKD2-201ENST00000237596 LUC7LQ9NQ29 371 aaKnown RBP22.03■■□□□ 1.12
PKD2-201ENST00000237596 FBLN1P23142 703 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 CCDC83Q8IWF9 413 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 MBIPQ9NS73 344 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 CWC25Q9NXE8 425 aaPredicted RBP22.02■■□□□ 1.12
PKD2-201ENST00000237596 C6orf229H3BNL8 230 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 SETQ01105 290 aaPredicted RBP22.02■■□□□ 1.12
PKD2-201ENST00000237596 CEP57L1Q8IYX8 460 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 NUP62CLQ9H1M0 184 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 PLCH2O75038 1416 aa22.02■■□□□ 1.12
PKD2-201ENST00000237596 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.11
PKD2-201ENST00000237596 IQCA1Q86XH1 822 aa22.02■■□□□ 1.11
PKD2-201ENST00000237596 CTCFLQ8NI51 663 aaPredicted RBP22.02■■□□□ 1.11
PKD2-201ENST00000237596 CDC5LQ99459 802 aaKnown RBP22.02■■□□□ 1.11
PKD2-201ENST00000237596 ZNF771Q7L3S4 317 aaPredicted RBP22.01■■□□□ 1.11
PKD2-201ENST00000237596 SEC63Q9UGP8 760 aaKnown RBP22.01■■□□□ 1.11
PKD2-201ENST00000237596 NPHP3Q7Z494 1330 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms