RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 FERP16591 822 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 ERLIN1O75477 346 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 CC2D2AQ9P2K1 1620 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 HMGN5P82970 282 aaKnown RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 PLVAPQ9BX97 442 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 DDX46Q7L014 1031 aaKnown RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 H0YHG0 523 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 RFC4P35249 363 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
MED28-201ENST00000237380 CDK19Q9BWU1 502 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 TNNI2P48788 182 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 CNGA1P29973 690 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 MTMR7Q9Y216 660 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 RFX1P22670 979 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 TAF4BQ92750 862 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 FKBP15Q5T1M5 1219 aa8.66□□□□□ -1.02
MED28-201ENST00000237380 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
MED28-201ENST00000237380 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
MED28-201ENST00000237380 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
MED28-201ENST00000237380 GTPBP4Q9BZE4 634 aaKnown RBP8.65□□□□□ -1.02
MED28-201ENST00000237380 DNMBPQ6XZF7 1577 aa8.65□□□□□ -1.02
MED28-201ENST00000237380 GCOM1H8Y6P7 765 aaPredicted RBP8.65□□□□□ -1.02
MED28-201ENST00000237380 MYZAPP0CAP1 466 aa8.65□□□□□ -1.02
MED28-201ENST00000237380 PDE4BQ07343 736 aa8.65□□□□□ -1.02
MED28-201ENST00000237380 CTCFLQ8NI51 663 aaPredicted RBP8.65□□□□□ -1.02
MED28-201ENST00000237380 IFT57Q9NWB7 429 aa8.65□□□□□ -1.02
MED28-201ENST00000237380 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.023e-10■■■□□ 18.7
MED28-201ENST00000237380 NFE2L2Q16236 605 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 WDR78Q5VTH9 848 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 PRKRIP1Q9H875 184 aaPredicted RBP8.65□□□□□ -1.03
MED28-201ENST00000237380 CABP2Q9NPB3 220 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 COMMD10Q9Y6G5 202 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 TIAM1Q13009 1591 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 FAM177BA6PVY3 158 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 CERS3Q8IU89 383 aa8.65□□□□□ -1.03
MED28-201ENST00000237380 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
MED28-201ENST00000237380 V9GYY5 206 aaPredicted RBP8.64□□□□□ -1.03
MED28-201ENST00000237380 RRP1P56182 461 aaKnown RBP8.64□□□□□ -1.03
MED28-201ENST00000237380 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 LPXNO60711 386 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 MSANTD4Q8NCY6 345 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
MED28-201ENST00000237380 METTL24Q5JXM2 366 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 TMOD4Q9NZQ9 345 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 GABPB2Q8TAK5 448 aaPredicted RBP8.64□□□□□ -1.03
MED28-201ENST00000237380 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
MED28-201ENST00000237380 HMOX1P09601 288 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 PRPF31Q8WWY3 499 aaKnown RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 SERPINC1P01008 464 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
MED28-201ENST00000237380 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 KIAA0754O94854 1291 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 FKBP4Q02790 459 aaKnown RBP eCLIP8.63□□□□□ -1.03
MED28-201ENST00000237380 FAM114A1Q8IWE2 563 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 CCDC148Q8NFR7 591 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 PRAM1Q96QH2 718 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 GBP3Q9H0R5 595 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 CCDC192P0DO97 292 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 USP8P40818 1118 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 KRT85P78386 507 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 WDR33Q9C0J8 1336 aaKnown RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 TWISTNBQ3B726 338 aaPredicted RBP8.63□□□□□ -1.03
MED28-201ENST00000237380 CATIPQ7Z7H3 387 aa8.63□□□□□ -1.03
MED28-201ENST00000237380 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
MED28-201ENST00000237380 ERMNQ8TAM6 284 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 ACTN2P35609 894 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 NUP133Q8WUM0 1156 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 CALML4Q96GE6 196 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 MAGI1Q96QZ7 1491 aaPredicted RBP8.62□□□□□ -1.03
MED28-201ENST00000237380 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 PLEKHH1Q9ULM0 1364 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 CCDC83Q8IWF9 413 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 SH2D4AQ9H788 454 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 PLCG2P16885 1265 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 SNX16P57768 344 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 MAP9Q49MG5 647 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 CCDC174Q6PII3 467 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 CCDC61Q9Y6R9 512 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 GAS8O95995 478 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
MED28-201ENST00000237380 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
MED28-201ENST00000237380 NAPBQ9H115 298 aa8.62□□□□□ -1.03
MED28-201ENST00000237380 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms