RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SPATA24Q86W54 205 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 CAMK4Q16566 473 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 MX1P20591 662 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 RNF187Q5TA31 235 aaPredicted RBP9.56□□□□□ -0.88
APOB-201ENST00000233242 SNX21Q969T3 373 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 GLRX3O76003 335 aaKnown RBP9.56□□□□□ -0.88
APOB-201ENST00000233242 PTPRGP23470 1445 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 HSPA4P34932 840 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 CCDC69A6NI79 296 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 IFFO1Q0D2I5 559 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 GPATCH11Q8N954 259 aa9.56□□□□□ -0.88
APOB-201ENST00000233242 ZNF165P49910 485 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 IPO4Q8TEX9 1081 aaKnown RBP9.55□□□□□ -0.88
APOB-201ENST00000233242 STK3Q13188 491 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 TANGO6Q9C0B7 1094 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 TAOK3Q9H2K8 898 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 GGNBP2Q9H3C7 697 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
APOB-201ENST00000233242 FKBP15Q5T1M5 1219 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 CEP112Q8N8E3 955 aa9.55□□□□□ -0.88
APOB-201ENST00000233242 CKAP4Q07065 602 aaKnown RBP9.55□□□□□ -0.88
APOB-201ENST00000233242 PYM1Q9BRP8 204 aaKnown RBP9.55□□□□□ -0.88
APOB-201ENST00000233242 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
APOB-201ENST00000233242 AACSQ86V21 672 aa9.54□□□□□ -0.88
APOB-201ENST00000233242 TMEM57Q8N5G2 664 aa9.54□□□□□ -0.88
APOB-201ENST00000233242 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
APOB-201ENST00000233242 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
APOB-201ENST00000233242 KIF1BPQ96EK5 621 aa9.54□□□□□ -0.88
APOB-201ENST00000233242 STX6O43752 255 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 DDX12PQ92771 950 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 CCDC196A0A1B0GTZ2 297 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 GOLIM4O00461 696 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 NBPF8Q3BBV2 869 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 CWC27Q6UX04 472 aaKnown RBP9.53□□□□□ -0.88
APOB-201ENST00000233242 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
APOB-201ENST00000233242 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 OPA1O60313 960 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 PLEKHO1Q53GL0 409 aaPredicted RBP9.53□□□□□ -0.88
APOB-201ENST00000233242 ANKRD62A6NC57 917 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 DESP17661 470 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 A6NNZ2 444 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 TTC39AQ5SRH9 613 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 ANKS4BQ8N8V4 417 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
APOB-201ENST00000233242 RAD21O60216 631 aa9.52□□□□□ -0.88
APOB-201ENST00000233242 KANK3Q6NY19 840 aa9.52□□□□□ -0.88
APOB-201ENST00000233242 TTC31Q49AM3 519 aaPredicted RBP9.52□□□□□ -0.89
APOB-201ENST00000233242 NCOA1Q15788 1441 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 TICAM2Q86XR7 235 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 TMC6Q7Z403 805 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 NSRP1Q9H0G5 558 aaKnown RBP9.52□□□□□ -0.89
APOB-201ENST00000233242 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 SLU7O95391 586 aaKnown RBP9.52□□□□□ -0.89
APOB-201ENST00000233242 UBAC1Q9BSL1 405 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 RASSF4Q9H2L5 321 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 RAI14Q9P0K7 980 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 C6orf163Q5TEZ5 329 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
APOB-201ENST00000233242 EBAG9O00559 213 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 SRGAP3O43295 1099 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 CABP2Q9NPB3 220 aa9.52□□□□□ -0.89
APOB-201ENST00000233242 STAMBPO95630 424 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
APOB-201ENST00000233242 SKILP12757 684 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 GNG11P61952 73 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 ANAPC15P60006 121 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 HDAC1Q13547 482 aaPredicted RBP9.51□□□□□ -0.89
APOB-201ENST00000233242 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
APOB-201ENST00000233242 HSF2BPO75031 334 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 NUP88Q99567 741 aaPredicted RBP9.51□□□□□ -0.89
APOB-201ENST00000233242 TRERF1Q96PN7 1200 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 HMG20BQ9P0W2 317 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 STMN4Q9H169 189 aaPredicted RBP9.51□□□□□ -0.89
APOB-201ENST00000233242 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 FAM114A1Q8IWE2 563 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
APOB-201ENST00000233242 CKAP2LQ8IYA6 745 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 C8orf76Q96K31 380 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTAGE15A4D2H0 777 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTAGE8P0CG41 777 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CCDC184Q52MB2 194 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTAGE6Q86UF2 777 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTAGE4Q8IX94 777 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
APOB-201ENST00000233242 TSG101Q99816 390 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 AIMP1Q12904 312 aaKnown RBP9.5□□□□□ -0.89
APOB-201ENST00000233242 SOGA3Q5TF21 947 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
APOB-201ENST00000233242 NFE2L2Q16236 605 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 FERMT3Q86UX7 667 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 GAPVD1Q14C86 1478 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 FSIP1Q8NA03 581 aa9.5□□□□□ -0.89
APOB-201ENST00000233242 CCDC12Q8WUD4 166 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms