RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 CRB1P82279 1406 aa12.34□□□□□ -0.43
MDH1-201ENST00000233114 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
MDH1-201ENST00000233114 SNX21Q969T3 373 aa12.34□□□□□ -0.43
MDH1-201ENST00000233114 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
MDH1-201ENST00000233114 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.43
MDH1-201ENST00000233114 RGS12O14924 1447 aa12.33□□□□□ -0.43
MDH1-201ENST00000233114 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
MDH1-201ENST00000233114 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
MDH1-201ENST00000233114 THEMISQ8N1K5 641 aaPredicted RBP12.33□□□□□ -0.44
MDH1-201ENST00000233114 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
MDH1-201ENST00000233114 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
MDH1-201ENST00000233114 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 ANKRD45Q5TZF3 282 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
MDH1-201ENST00000233114 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
MDH1-201ENST00000233114 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
MDH1-201ENST00000233114 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
MDH1-201ENST00000233114 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
MDH1-201ENST00000233114 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
MDH1-201ENST00000233114 ELL2O00472 640 aaPredicted RBP12.3□□□□□ -0.44
MDH1-201ENST00000233114 PYGBP11216 843 aa12.3□□□□□ -0.44
MDH1-201ENST00000233114 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
MDH1-201ENST00000233114 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 SLC26A8Q96RN1 970 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
MDH1-201ENST00000233114 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
MDH1-201ENST00000233114 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 MARF1Q9Y4F3 1742 aaKnown RBP12.29□□□□□ -0.44
MDH1-201ENST00000233114 ST18O60284 1047 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 CDC45O75419 566 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
MDH1-201ENST00000233114 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
MDH1-201ENST00000233114 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
MDH1-201ENST00000233114 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
MDH1-201ENST00000233114 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
MDH1-201ENST00000233114 MCM10Q7L590 875 aa12.27□□□□□ -0.45
MDH1-201ENST00000233114 C1orf115Q9H7X2 142 aa12.27□□□□□ -0.45
MDH1-201ENST00000233114 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.45
MDH1-201ENST00000233114 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
MDH1-201ENST00000233114 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
MDH1-201ENST00000233114 MSH6P52701 1360 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 NWD1Q149M9 1564 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 HMMRO75330 724 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 DDIT3P35638 169 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 AMPHP49418 695 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 PLEKHM2Q8IWE5 1019 aa12.26□□□□□ -0.45
MDH1-201ENST00000233114 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
MDH1-201ENST00000233114 ZNF142P52746 1687 aaPredicted RBP12.25□□□□□ -0.45
MDH1-201ENST00000233114 PTMSP20962 102 aa12.25□□□□□ -0.45
MDH1-201ENST00000233114 MCM4P33991 863 aa12.25□□□□□ -0.45
MDH1-201ENST00000233114 CEBPAP49715 358 aaPredicted RBP12.25□□□□□ -0.45
MDH1-201ENST00000233114 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
MDH1-201ENST00000233114 L1TD1Q5T7N2 865 aaKnown RBP12.25□□□□□ -0.45
MDH1-201ENST00000233114 TTC22Q5TAA0 569 aa12.25□□□□□ -0.45
MDH1-201ENST00000233114 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
MDH1-201ENST00000233114 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
MDH1-201ENST00000233114 EYA1Q99502 592 aa12.24□□□□□ -0.45
MDH1-201ENST00000233114 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
MDH1-201ENST00000233114 PHRF1Q9P1Y6 1649 aaKnown RBP12.24□□□□□ -0.45
MDH1-201ENST00000233114 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
MDH1-201ENST00000233114 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
MDH1-201ENST00000233114 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
MDH1-201ENST00000233114 HOXC9P31274 260 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 CASC1Q6TDU7 716 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 STK31Q9BXU1 1019 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 NLRP6P59044 892 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 KRT24Q2M2I5 525 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 KIF2CQ99661 725 aa12.22□□□□□ -0.45
MDH1-201ENST00000233114 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
MDH1-201ENST00000233114 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.45
MDH1-201ENST00000233114 GSPT1P15170 499 aaKnown RBP12.21□□□□□ -0.45
MDH1-201ENST00000233114 RABEP1Q15276 862 aa12.21□□□□□ -0.45
MDH1-201ENST00000233114 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
MDH1-201ENST00000233114 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
MDH1-201ENST00000233114 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
MDH1-201ENST00000233114 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
MDH1-201ENST00000233114 GNAI3P08754 354 aa12.2□□□□□ -0.46
MDH1-201ENST00000233114 KCNA6P17658 529 aa12.2□□□□□ -0.46
MDH1-201ENST00000233114 MEIS3Q99687 375 aa12.2□□□□□ -0.46
MDH1-201ENST00000233114 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
MDH1-201ENST00000233114 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
MDH1-201ENST00000233114 NFAT5O94916 1531 aa12.19□□□□□ -0.46
MDH1-201ENST00000233114 LTN1O94822 1766 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms