RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 TRPM2O94759 1503 aa20.13■□□□□ 0.81
PTK7-202ENST00000230419 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
PTK7-202ENST00000230419 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
PTK7-202ENST00000230419 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
PTK7-202ENST00000230419 PLEKHM2Q8IWE5 1019 aa20.13■□□□□ 0.81
PTK7-202ENST00000230419 CHAMP1Q96JM3 812 aa20.13■□□□□ 0.81
PTK7-202ENST00000230419 ANKRD44Q8N8A2 993 aa20.13■□□□□ 0.81
PTK7-202ENST00000230419 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
PTK7-202ENST00000230419 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
PTK7-202ENST00000230419 SYCE3A1L190 88 aa20.12■□□□□ 0.81
PTK7-202ENST00000230419 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
PTK7-202ENST00000230419 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
PTK7-202ENST00000230419 CPLX1O14810 134 aa20.11■□□□□ 0.81
PTK7-202ENST00000230419 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
PTK7-202ENST00000230419 FAM13BQ9NYF5 915 aa20.11■□□□□ 0.81
PTK7-202ENST00000230419 INSRP06213 1382 aa20.11■□□□□ 0.81
PTK7-202ENST00000230419 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
PTK7-202ENST00000230419 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
PTK7-202ENST00000230419 HOXC9P31274 260 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 PDE1AP54750 535 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTK7-202ENST00000230419 RBM27Q9P2N5 1060 aaKnown RBP20.1■□□□□ 0.81
PTK7-202ENST00000230419 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 PNMA6EA0A0J9YXQ4 647 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 CPA1P15085 419 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 BECN2A8MW95 431 aa20.1■□□□□ 0.81
PTK7-202ENST00000230419 CCDC83Q8IWF9 413 aa20.09■□□□□ 0.81
PTK7-202ENST00000230419 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
PTK7-202ENST00000230419 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
PTK7-202ENST00000230419 KIF1BPQ96EK5 621 aa20.09■□□□□ 0.81
PTK7-202ENST00000230419 MSH6P52701 1360 aa20.09■□□□□ 0.81
PTK7-202ENST00000230419 ADCY10Q96PN6 1610 aa20.09■□□□□ 0.81
PTK7-202ENST00000230419 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
PTK7-202ENST00000230419 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
PTK7-202ENST00000230419 NFATC2IPQ8NCF5 419 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.81
PTK7-202ENST00000230419 NRDCO43847 1150 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 UBE3BQ7Z3V4 1068 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 NBPF4Q96M43 638 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
PTK7-202ENST00000230419 DDX11Q96FC9 970 aa20.08■□□□□ 0.8
PTK7-202ENST00000230419 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.8
PTK7-202ENST00000230419 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.8
PTK7-202ENST00000230419 PTPRCP08575 1304 aa20.08■□□□□ 0.8
PTK7-202ENST00000230419 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
PTK7-202ENST00000230419 GCP02774 474 aa20.07■□□□□ 0.8
PTK7-202ENST00000230419 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
PTK7-202ENST00000230419 ZNF592Q92610 1267 aa20.07■□□□□ 0.8
PTK7-202ENST00000230419 SNRKQ9NRH2 765 aa20.07■□□□□ 0.8
PTK7-202ENST00000230419 GOLGA6L19H0YKK7 550 aa20.06■□□□□ 0.8
PTK7-202ENST00000230419 CHL1O00533 1208 aa20.06■□□□□ 0.8
PTK7-202ENST00000230419 NDUFB9Q9Y6M9 179 aa20.06■□□□□ 0.8
PTK7-202ENST00000230419 KDM5AP29375 1690 aaKnown RBP20.06■□□□□ 0.8
PTK7-202ENST00000230419 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
PTK7-202ENST00000230419 MCM2P49736 904 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 SPC24Q8NBT2 197 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 GPTP24298 496 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
PTK7-202ENST00000230419 MTMR7Q9Y216 660 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 NBPF7P0C2Y1 421 aaPredicted RBP20.05■□□□□ 0.8
PTK7-202ENST00000230419 ATP2B1P20020 1258 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
PTK7-202ENST00000230419 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
PTK7-202ENST00000230419 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
PTK7-202ENST00000230419 LARP1BQ659C4 914 aaKnown RBP20.04■□□□□ 0.8
PTK7-202ENST00000230419 RHPN1Q8TCX5 695 aa20.04■□□□□ 0.8
PTK7-202ENST00000230419 PDRG1Q9NUG6 133 aa20.04■□□□□ 0.8
PTK7-202ENST00000230419 BAG4O95429 457 aaKnown RBP20.04■□□□□ 0.8
PTK7-202ENST00000230419 IL17REQ8NFR9 667 aa20.04■□□□□ 0.8
PTK7-202ENST00000230419 A0A087WZG4 1122 aa20.04■□□□□ 0.8
PTK7-202ENST00000230419 MBD3O95983 291 aa20.03■□□□□ 0.8
PTK7-202ENST00000230419 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
PTK7-202ENST00000230419 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
PTK7-202ENST00000230419 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
PTK7-202ENST00000230419 ESPNB1AK53 854 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 BLOC1S2Q6QNY1 142 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 RALYLQ86SE5 291 aaKnown RBP20.02■□□□□ 0.8
PTK7-202ENST00000230419 RAB11FIP4Q86YS3 637 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 FMNL2Q96PY5 1086 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 FLT4P35916 1363 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 LRRC2Q9BYS8 371 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 CROCC2H7BZ55 1655 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 TRDNQ13061 729 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 SIRT2Q8IXJ6 389 aa20.02■□□□□ 0.8
PTK7-202ENST00000230419 XRCC6P12956 609 aaKnown RBP eCLIP20.02■□□□□ 0.79
PTK7-202ENST00000230419 PSMA5P28066 241 aa20.02■□□□□ 0.79
PTK7-202ENST00000230419 NECAB1Q8N987 351 aa20.02■□□□□ 0.79
PTK7-202ENST00000230419 USP19O94966 1318 aa20.01■□□□□ 0.79
PTK7-202ENST00000230419 GLRX3O76003 335 aaKnown RBP20.01■□□□□ 0.79
PTK7-202ENST00000230419 CD2BP2O95400 341 aaKnown RBP20.01■□□□□ 0.79
PTK7-202ENST00000230419 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
PTK7-202ENST00000230419 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
PTK7-202ENST00000230419 GSPT1P15170 499 aaKnown RBP20■□□□□ 0.79
PTK7-202ENST00000230419 SETD1BQ9UPS6 1966 aaKnown RBP20■□□□□ 0.79
PTK7-202ENST00000230419 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
PTK7-202ENST00000230419 RASSF8Q8NHQ8 419 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms