RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 LMTK3Q96Q04 1460 aa18.08■□□□□ 0.49
PRKAB1-201ENST00000229328 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
PRKAB1-201ENST00000229328 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 TEFQ10587 303 aa18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
PRKAB1-201ENST00000229328 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 CCT4P50991 539 aaKnown RBP18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 NBR1Q14596 966 aa18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 KDM3BQ7LBC6 1761 aa18.06■□□□□ 0.48
PRKAB1-201ENST00000229328 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 CHRNA2Q15822 529 aa18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
PRKAB1-201ENST00000229328 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
PRKAB1-201ENST00000229328 TBC1D32Q96NH3 1257 aa18.04■□□□□ 0.48
PRKAB1-201ENST00000229328 NLRP2Q9NX02 1062 aa18.04■□□□□ 0.48
PRKAB1-201ENST00000229328 ZNF335Q9H4Z2 1342 aaPredicted RBP18.03■□□□□ 0.48
PRKAB1-201ENST00000229328 COL18A1P39060 1754 aa18.03■□□□□ 0.48
PRKAB1-201ENST00000229328 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
PRKAB1-201ENST00000229328 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
PRKAB1-201ENST00000229328 BMP2KLQ5H9B9 411 aa18.02■□□□□ 0.47
PRKAB1-201ENST00000229328 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
PRKAB1-201ENST00000229328 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
PRKAB1-201ENST00000229328 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
PRKAB1-201ENST00000229328 CACNA1FO60840 1977 aa18■□□□□ 0.47
PRKAB1-201ENST00000229328 CRYBG1Q9Y4K1 1723 aa18■□□□□ 0.47
PRKAB1-201ENST00000229328 APBB1O00213 710 aa18■□□□□ 0.47
PRKAB1-201ENST00000229328 ANXA1P04083 346 aa18■□□□□ 0.47
PRKAB1-201ENST00000229328 RAPGEF4Q8WZA2 1011 aa18■□□□□ 0.47
PRKAB1-201ENST00000229328 OVOS2A0A0G2JMS6 1433 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 GNAI2P04899 355 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 HOXB7P09629 217 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 MEGF6O75095 1541 aa17.99■□□□□ 0.47
PRKAB1-201ENST00000229328 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
PRKAB1-201ENST00000229328 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
PRKAB1-201ENST00000229328 SLAIN2Q9P270 581 aa17.97■□□□□ 0.47
PRKAB1-201ENST00000229328 GSPT1P15170 499 aaKnown RBP17.97■□□□□ 0.47
PRKAB1-201ENST00000229328 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
PRKAB1-201ENST00000229328 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 USP44Q9H0E7 712 aa17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 PXDNLA1KZ92 1463 aa17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 GNAI3P08754 354 aa17.96■□□□□ 0.47
PRKAB1-201ENST00000229328 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 CPDO75976 1380 aa17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 PHKG2P15735 406 aa17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 HMMRO75330 724 aa17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
PRKAB1-201ENST00000229328 LRRFIP2Q9Y608 721 aaKnown RBP17.94■□□□□ 0.46
PRKAB1-201ENST00000229328 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
PRKAB1-201ENST00000229328 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
PRKAB1-201ENST00000229328 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
PRKAB1-201ENST00000229328 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
PRKAB1-201ENST00000229328 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
PRKAB1-201ENST00000229328 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
PRKAB1-201ENST00000229328 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
PRKAB1-201ENST00000229328 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
PRKAB1-201ENST00000229328 ATP8B2P98198 1209 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 ABCC6O95255 1503 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 CYP27B1O15528 508 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 TTC22Q5TAA0 569 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 DBF4Q9UBU7 674 aaPredicted RBP17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 ADCY9O60503 1353 aa17.92■□□□□ 0.46
PRKAB1-201ENST00000229328 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 IFNL2Q8IZJ0 200 aa17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 TBC1D2Q9BYX2 928 aa17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
PRKAB1-201ENST00000229328 BECN1Q14457 450 aa17.9■□□□□ 0.46
PRKAB1-201ENST00000229328 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
PRKAB1-201ENST00000229328 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
PRKAB1-201ENST00000229328 NBPF7P0C2Y1 421 aaPredicted RBP17.89■□□□□ 0.45
PRKAB1-201ENST00000229328 CDC45O75419 566 aa17.88■□□□□ 0.45
PRKAB1-201ENST00000229328 RBM25P49756 843 aaKnown RBP17.87■□□□□ 0.45
PRKAB1-201ENST00000229328 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
PRKAB1-201ENST00000229328 PDIA6Q15084 440 aa17.86■□□□□ 0.45
PRKAB1-201ENST00000229328 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
PRKAB1-201ENST00000229328 SDSP20132 328 aa17.86■□□□□ 0.45
PRKAB1-201ENST00000229328 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
PRKAB1-201ENST00000229328 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms