RNA–Protein interactions for RNA: ENST00000228741.7

ELK3-201, Transcript of ELK3, ETS transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELK3, Length 4,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK3-201ENST00000228741 UPF1Q92900 1129 aaKnown RBP eCLIP11.26□□□□□ -0.61
ELK3-201ENST00000228741 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
ELK3-201ENST00000228741 DNAJC10Q8IXB1 793 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
ELK3-201ENST00000228741 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 COL14A1Q05707 1796 aaKnown RBP11.25□□□□□ -0.61
ELK3-201ENST00000228741 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
ELK3-201ENST00000228741 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
ELK3-201ENST00000228741 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
ELK3-201ENST00000228741 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
ELK3-201ENST00000228741 TXNRD1Q16881 649 aa11.24□□□□□ -0.61
ELK3-201ENST00000228741 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
ELK3-201ENST00000228741 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
ELK3-201ENST00000228741 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
ELK3-201ENST00000228741 A1BGP04217 495 aa11.24□□□□□ -0.61
ELK3-201ENST00000228741 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
ELK3-201ENST00000228741 GNPATO15228 680 aa11.24□□□□□ -0.61
ELK3-201ENST00000228741 OVOS2A0A0G2JMS6 1433 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 SIK1P57059 783 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 AK7Q96M32 723 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
ELK3-201ENST00000228741 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
ELK3-201ENST00000228741 USP16Q9Y5T5 823 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
ELK3-201ENST00000228741 EXOSC9Q06265 439 aaKnown RBP11.22□□□□□ -0.61
ELK3-201ENST00000228741 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
ELK3-201ENST00000228741 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
ELK3-201ENST00000228741 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
ELK3-201ENST00000228741 PDGFDQ9GZP0 370 aaPredicted RBP11.22□□□□□ -0.61
ELK3-201ENST00000228741 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
ELK3-201ENST00000228741 GLI3P10071 1580 aa11.22□□□□□ -0.61
ELK3-201ENST00000228741 MBIPQ9NS73 344 aa11.22□□□□□ -0.61
ELK3-201ENST00000228741 TSPYL6Q8N831 410 aa11.21□□□□□ -0.61
ELK3-201ENST00000228741 PALLDQ8WX93 1383 aa11.21□□□□□ -0.61
ELK3-201ENST00000228741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.62
ELK3-201ENST00000228741 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
ELK3-201ENST00000228741 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 HDGFL1Q5TGJ6 251 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 SLC4A10Q6U841 1118 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 CLUAP1Q96AJ1 413 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
ELK3-201ENST00000228741 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
ELK3-201ENST00000228741 C8orf58Q8NAV2 365 aa11.19□□□□□ -0.62
ELK3-201ENST00000228741 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
ELK3-201ENST00000228741 GNAI1P63096 354 aa11.19□□□□□ -0.62
ELK3-201ENST00000228741 DUSP27Q5VZP5 1158 aa11.19□□□□□ -0.62
ELK3-201ENST00000228741 KDRP35968 1356 aa11.18□□□□□ -0.62
ELK3-201ENST00000228741 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
ELK3-201ENST00000228741 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
ELK3-201ENST00000228741 ITPK1Q13572 414 aa11.18□□□□□ -0.62
ELK3-201ENST00000228741 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
ELK3-201ENST00000228741 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
ELK3-201ENST00000228741 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
ELK3-201ENST00000228741 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
ELK3-201ENST00000228741 STARD3NLO95772 234 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 GPTP24298 496 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 CALD1Q05682 793 aaKnown RBP11.17□□□□□ -0.62
ELK3-201ENST00000228741 PROM2Q8N271 834 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
ELK3-201ENST00000228741 RFC4P35249 363 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 STK31Q9BXU1 1019 aa11.17□□□□□ -0.62
ELK3-201ENST00000228741 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
ELK3-201ENST00000228741 SOCS7O14512 581 aa11.16□□□□□ -0.62
ELK3-201ENST00000228741 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
ELK3-201ENST00000228741 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 PLIN1O60240 522 aa11.16□□□□□ -0.62
ELK3-201ENST00000228741 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
ELK3-201ENST00000228741 SNRPA1P09661 255 aaKnown RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
ELK3-201ENST00000228741 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
ELK3-201ENST00000228741 COL18A1P39060 1754 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 LMO7Q8WWI1 1683 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 CHPF2Q9P2E5 772 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 FANCIQ9NVI1 1328 aa11.15□□□□□ -0.62
ELK3-201ENST00000228741 ZPR1O75312 459 aa11.14□□□□□ -0.63
ELK3-201ENST00000228741 PROSER3Q2NL68 480 aa11.14□□□□□ -0.63
ELK3-201ENST00000228741 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
ELK3-201ENST00000228741 NRAPQ86VF7 1730 aa11.14□□□□□ -0.63
ELK3-201ENST00000228741 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
ELK3-201ENST00000228741 DISP2A7MBM2 1401 aa11.14□□□□□ -0.63
ELK3-201ENST00000228741 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
ELK3-201ENST00000228741 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
ELK3-201ENST00000228741 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
ELK3-201ENST00000228741 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms