RNA–Protein interactions for RNA: ENST00000226522.8

LAMTOR3-201, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 3, humanhuman

TSL 3 BASIC

Gene LAMTOR3, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR3-201ENST00000226522 UPP2O95045 317 aa12.08□□□□□ -0.48
LAMTOR3-201ENST00000226522 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
LAMTOR3-201ENST00000226522 CLN3Q13286 438 aa12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 CLP1Q92989 425 aaKnown RBP12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 XAGE2Q96GT9 111 aa12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 NLRP3Q96P20 1036 aa12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
LAMTOR3-201ENST00000226522 PRMT3O60678 531 aa12.06□□□□□ -0.48
LAMTOR3-201ENST00000226522 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
LAMTOR3-201ENST00000226522 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
LAMTOR3-201ENST00000226522 TLR1Q15399 786 aa12.05□□□□□ -0.48
LAMTOR3-201ENST00000226522 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
LAMTOR3-201ENST00000226522 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
LAMTOR3-201ENST00000226522 BMP2P12643 396 aa12.04□□□□□ -0.48
LAMTOR3-201ENST00000226522 SMTNP53814 917 aa12.04□□□□□ -0.48
LAMTOR3-201ENST00000226522 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
LAMTOR3-201ENST00000226522 C6orf118Q5T5N4 469 aa12.04□□□□□ -0.48
LAMTOR3-201ENST00000226522 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
LAMTOR3-201ENST00000226522 AXIN1O15169 862 aa12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 BMP1P13497 986 aa12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 MRPL14Q6P1L8 145 aaKnown RBP12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 AEBP1Q8IUX7 1158 aa12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 INSM2Q96T92 566 aaPredicted RBP12.03□□□□□ -0.48
LAMTOR3-201ENST00000226522 A6NJY4 79 aa12.02□□□□□ -0.49
LAMTOR3-201ENST00000226522 CENPCQ03188 943 aa12.02□□□□□ -0.49
LAMTOR3-201ENST00000226522 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
LAMTOR3-201ENST00000226522 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
LAMTOR3-201ENST00000226522 HRH3Q9Y5N1 445 aa12.02□□□□□ -0.49
LAMTOR3-201ENST00000226522 SPINT1O43278 529 aa12.01□□□□□ -0.49
LAMTOR3-201ENST00000226522 BRD1O95696 1058 aa12.01□□□□□ -0.49
LAMTOR3-201ENST00000226522 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
LAMTOR3-201ENST00000226522 EPHA4P54764 986 aa12.01□□□□□ -0.49
LAMTOR3-201ENST00000226522 POLMQ9NP87 494 aaPredicted RBP12.01□□□□□ -0.49
LAMTOR3-201ENST00000226522 SCARF1Q14162 830 aa12□□□□□ -0.49
LAMTOR3-201ENST00000226522 TBCELQ5QJ74 424 aa12□□□□□ -0.49
LAMTOR3-201ENST00000226522 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
LAMTOR3-201ENST00000226522 PURBQ96QR8 312 aaKnown RBP12□□□□□ -0.49
LAMTOR3-201ENST00000226522 TSPAN10Q9H1Z9 355 aaPredicted RBP12□□□□□ -0.49
LAMTOR3-201ENST00000226522 SCHIP1Q9P0W5 487 aaPredicted RBP12□□□□□ -0.49
LAMTOR3-201ENST00000226522 SSFA2P28290 1259 aa11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 MTFR1Q15390 333 aa11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 SLC9A9Q8IVB4 645 aa11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 SCG3Q8WXD2 468 aaKnown RBP11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
LAMTOR3-201ENST00000226522 ST8SIA5O15466 376 aa11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 WEE1P30291 646 aa11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 CTSOP43234 321 aaPredicted RBP11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 OCLNQ16625 522 aa11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 CRIPAKQ8N1N5 446 aa11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 ZSCAN10Q96SZ4 725 aaPredicted RBP11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 CXXC1Q9P0U4 656 aaPredicted RBP11.98□□□□□ -0.49
LAMTOR3-201ENST00000226522 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 FOXK2Q01167 660 aa11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 PHLDB3Q6NSJ2 640 aa11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 USP3Q9Y6I4 520 aa11.97□□□□□ -0.49
LAMTOR3-201ENST00000226522 CDK2AP1O14519 115 aa11.96□□□□□ -0.49
LAMTOR3-201ENST00000226522 IGFBP4P22692 258 aa11.96□□□□□ -0.49
LAMTOR3-201ENST00000226522 GPC1P35052 558 aa11.96□□□□□ -0.49
LAMTOR3-201ENST00000226522 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
LAMTOR3-201ENST00000226522 TMEM214Q6NUQ4 689 aaKnown RBP11.96□□□□□ -0.49
LAMTOR3-201ENST00000226522 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
LAMTOR3-201ENST00000226522 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
LAMTOR3-201ENST00000226522 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
LAMTOR3-201ENST00000226522 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
LAMTOR3-201ENST00000226522 IQSEC3Q9UPP2 1182 aaPredicted RBP11.95□□□□□ -0.5
LAMTOR3-201ENST00000226522 C21orf2O43822 256 aa11.94□□□□□ -0.5
LAMTOR3-201ENST00000226522 ZFP42Q96MM3 310 aa11.94□□□□□ -0.5
LAMTOR3-201ENST00000226522 GRIP2Q9C0E4 1043 aa11.94□□□□□ -0.5
LAMTOR3-201ENST00000226522 SCNN1AP37088 669 aa11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 KCNA1Q09470 495 aa11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 CABP1Q9NZU7 370 aa11.93□□□□□ -0.5
LAMTOR3-201ENST00000226522 ZBTB7CA1YPR0 619 aa11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 PSMA6P60900 246 aaKnown RBP11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
LAMTOR3-201ENST00000226522 FOXO3O43524 673 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 VTI1AQ96AJ9 217 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
LAMTOR3-201ENST00000226522 FIGNL2A6NMB9 653 aa11.9□□□□□ -0.5
LAMTOR3-201ENST00000226522 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
LAMTOR3-201ENST00000226522 PRICKLE2Q7Z3G6 844 aa11.9□□□□□ -0.5
LAMTOR3-201ENST00000226522 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
LAMTOR3-201ENST00000226522 ZNF232Q9UNY5 417 aa11.9□□□□□ -0.5
LAMTOR3-201ENST00000226522 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms