RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 FAM196BA6NMK8 535 aa10.71□□□□□ -0.69
CCL1-201ENST00000225842 NR1I2O75469 434 aa10.71□□□□□ -0.69
CCL1-201ENST00000225842 RASA1P20936 1047 aa10.71□□□□□ -0.69
CCL1-201ENST00000225842 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
CCL1-201ENST00000225842 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
CCL1-201ENST00000225842 TNRQ92752 1358 aa10.71□□□□□ -0.69
CCL1-201ENST00000225842 RNF17Q9BXT8 1623 aaKnown RBP10.7□□□□□ -0.7
CCL1-201ENST00000225842 CLIP1P30622 1438 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 BCAMP50895 628 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 PTK2Q05397 1052 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 ADGRD1Q6QNK2 874 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 TXNDC2Q86VQ3 553 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
CCL1-201ENST00000225842 MED14O60244 1454 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
CCL1-201ENST00000225842 GOLGA8CPA6NN73 597 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 ST18O60284 1047 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
CCL1-201ENST00000225842 OCSTAMPQ9BR26 566 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 AMOTL2Q9Y2J4 779 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
CCL1-201ENST00000225842 KIF14Q15058 1648 aa10.69□□□□□ -0.7
CCL1-201ENST00000225842 KCNH2Q12809 1159 aa10.68□□□□□ -0.7
CCL1-201ENST00000225842 PTK7Q13308 1070 aa10.68□□□□□ -0.7
CCL1-201ENST00000225842 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
CCL1-201ENST00000225842 FAM200AQ8TCP9 573 aa10.68□□□□□ -0.7
CCL1-201ENST00000225842 ABCC1P33527 1531 aa10.68□□□□□ -0.7
CCL1-201ENST00000225842 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 SOWAHBA6NEL2 793 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 SSFA2P28290 1259 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 RXRBP28702 533 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
CCL1-201ENST00000225842 PDXDC2PQ6P474 469 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 NUDT12Q9BQG2 462 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 FAM135AQ9P2D6 1515 aa10.67□□□□□ -0.7
CCL1-201ENST00000225842 HNRNPMP52272 730 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCL1-201ENST00000225842 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 TSR3Q9UJK0 312 aaKnown RBP10.66□□□□□ -0.7
CCL1-201ENST00000225842 GPSM3Q9Y4H4 160 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 A2MP01023 1474 aa10.66□□□□□ -0.7
CCL1-201ENST00000225842 POLR1AO95602 1720 aaPredicted RBP10.65□□□□□ -0.7
CCL1-201ENST00000225842 ARID4AP29374 1257 aaPredicted RBP10.65□□□□□ -0.7
CCL1-201ENST00000225842 ANKMY2Q8IV38 441 aa10.65□□□□□ -0.7
CCL1-201ENST00000225842 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
CCL1-201ENST00000225842 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
CCL1-201ENST00000225842 JCADQ9P266 1359 aa10.65□□□□□ -0.71
CCL1-201ENST00000225842 HRO43593 1189 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
CCL1-201ENST00000225842 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCL1-201ENST00000225842 MSS51Q4VC12 460 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 ADAM32Q8TC27 787 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CCL1-201ENST00000225842 ZNF594Q96JF6 807 aaPredicted RBP10.64□□□□□ -0.71
CCL1-201ENST00000225842 SPSB2Q99619 263 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
CCL1-201ENST00000225842 EEA1Q15075 1411 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 SYNMO15061 1565 aa10.64□□□□□ -0.71
CCL1-201ENST00000225842 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 DPYDQ12882 1025 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 EML3Q32P44 896 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
CCL1-201ENST00000225842 MIA2Q96PC5 1412 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 SAMD9LQ8IVG5 1584 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 UGGT1Q9NYU2 1555 aa10.63□□□□□ -0.71
CCL1-201ENST00000225842 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
CCL1-201ENST00000225842 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
CCL1-201ENST00000225842 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
CCL1-201ENST00000225842 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
CCL1-201ENST00000225842 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 FMN1Q68DA7 1419 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 SCNN1AP37088 669 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 SERPINB4P48594 390 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 COPS2P61201 443 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 WNT2BQ93097 391 aa10.61□□□□□ -0.71
CCL1-201ENST00000225842 WASHC2CQ9Y4E1 1318 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 LZTS3O60299 673 aaPredicted RBP10.6□□□□□ -0.71
CCL1-201ENST00000225842 MMP16P51512 607 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 CLDN10P78369 228 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 MAP7D1Q3KQU3 841 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 TRAF7Q6Q0C0 670 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 PZPP20742 1482 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
CCL1-201ENST00000225842 ATP7AQ04656 1500 aa10.59□□□□□ -0.71
CCL1-201ENST00000225842 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms