RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
SUPT4H1-201ENST00000225504 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
SUPT4H1-201ENST00000225504 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
SUPT4H1-201ENST00000225504 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
SUPT4H1-201ENST00000225504 SMARCC1Q92922 1105 aaPredicted RBP19.05■□□□□ 0.64
SUPT4H1-201ENST00000225504 DLG5Q8TDM6 1919 aa19.05■□□□□ 0.64
SUPT4H1-201ENST00000225504 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 RIPK4P57078 832 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 CCNL1Q9UK58 526 aaPredicted RBP19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 LY75O60449 1722 aa19.04■□□□□ 0.64
SUPT4H1-201ENST00000225504 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 MIER1Q8N108 512 aa19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 APAF1O14727 1248 aa19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 TEFQ10587 303 aa19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 SLC27A3Q5K4L6 730 aa19.03■□□□□ 0.64
SUPT4H1-201ENST00000225504 LOC102724428A0A0B4J2F2 783 aa19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 SIK1P57059 783 aa19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 MRC1P22897 1456 aa19.02■□□□□ 0.63
SUPT4H1-201ENST00000225504 KCNQ3O43525 872 aa19■□□□□ 0.63
SUPT4H1-201ENST00000225504 ITPK1Q13572 414 aa19■□□□□ 0.63
SUPT4H1-201ENST00000225504 NBPF14Q5TI25 921 aa19■□□□□ 0.63
SUPT4H1-201ENST00000225504 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
SUPT4H1-201ENST00000225504 ZNF827Q17R98 1081 aa18.99■□□□□ 0.63
SUPT4H1-201ENST00000225504 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
SUPT4H1-201ENST00000225504 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
SUPT4H1-201ENST00000225504 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
SUPT4H1-201ENST00000225504 SLC15A2Q16348 729 aa18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 AKT1S1Q96B36 256 aa18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 LINC00116Q8NCU8 138 aa18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 PDGFDQ9GZP0 370 aaPredicted RBP18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 STK32BQ9NY57 414 aa18.97■□□□□ 0.63
SUPT4H1-201ENST00000225504 PAPPAQ13219 1627 aa18.96■□□□□ 0.63
SUPT4H1-201ENST00000225504 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
SUPT4H1-201ENST00000225504 ZNF790Q6PG37 636 aa18.96■□□□□ 0.63
SUPT4H1-201ENST00000225504 SMIM5Q71RC9 77 aa18.95■□□□□ 0.62
SUPT4H1-201ENST00000225504 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
SUPT4H1-201ENST00000225504 TAF1LQ8IZX4 1826 aa18.94■□□□□ 0.62
SUPT4H1-201ENST00000225504 KCPQ6ZWJ8 1503 aa18.93■□□□□ 0.62
SUPT4H1-201ENST00000225504 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
SUPT4H1-201ENST00000225504 C5P01031 1676 aa18.92■□□□□ 0.62
SUPT4H1-201ENST00000225504 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
SUPT4H1-201ENST00000225504 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
SUPT4H1-201ENST00000225504 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
SUPT4H1-201ENST00000225504 TFCP2L1Q9NZI6 479 aa18.91■□□□□ 0.62
SUPT4H1-201ENST00000225504 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
SUPT4H1-201ENST00000225504 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
SUPT4H1-201ENST00000225504 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
SUPT4H1-201ENST00000225504 C4BP0C0L5 1744 aa18.89■□□□□ 0.61
SUPT4H1-201ENST00000225504 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
SUPT4H1-201ENST00000225504 TJP1Q07157 1748 aa18.89■□□□□ 0.61
SUPT4H1-201ENST00000225504 ZNF831Q5JPB2 1677 aa18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 PNPLA7Q6ZV29 1317 aa18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 VSIG10Q8N0Z9 540 aa18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 HEG1Q9ULI3 1381 aa18.88■□□□□ 0.61
SUPT4H1-201ENST00000225504 CRKLP46109 303 aaKnown RBP18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 COL23A1Q86Y22 540 aaPredicted RBP18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 AK7Q96M32 723 aa18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 MYH14Q7Z406 1995 aaKnown RBP18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
SUPT4H1-201ENST00000225504 CHL1O00533 1208 aa18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 GNPATO15228 680 aa18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
SUPT4H1-201ENST00000225504 COL5A3P25940 1745 aaPredicted RBP18.85■□□□□ 0.61
SUPT4H1-201ENST00000225504 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
SUPT4H1-201ENST00000225504 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 PHF14O94880 888 aa18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 ZBTB7AO95365 584 aa18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
SUPT4H1-201ENST00000225504 UBR3Q6ZT12 1888 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 MSH5O43196 834 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 RPS6KA4O75676 772 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 A1BGP04217 495 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 ZNF853P0CG23 659 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 CCDC87Q9NVE4 849 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 BABAM1Q9NWV8 329 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms