RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
CHMP5-201ENST00000223500 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
CHMP5-201ENST00000223500 MBIPQ9NS73 344 aa21.48■■□□□ 1.03
CHMP5-201ENST00000223500 SIPA1L3O60292 1781 aaPredicted RBP21.47■■□□□ 1.03
CHMP5-201ENST00000223500 MRC1P22897 1456 aa21.47■■□□□ 1.03
CHMP5-201ENST00000223500 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
CHMP5-201ENST00000223500 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.03
CHMP5-201ENST00000223500 RGS17Q9UGC6 210 aaPredicted RBP21.45■■□□□ 1.03
CHMP5-201ENST00000223500 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
CHMP5-201ENST00000223500 TOGARAM1Q9Y4F4 1720 aa21.43■■□□□ 1.02
CHMP5-201ENST00000223500 TMOD3Q9NYL9 352 aa21.43■■□□□ 1.02
CHMP5-201ENST00000223500 ITGB4P16144 1822 aa21.43■■□□□ 1.02
CHMP5-201ENST00000223500 CT47B1P0C2W7 299 aaPredicted RBP21.42■■□□□ 1.02
CHMP5-201ENST00000223500 EXOSC9Q06265 439 aaKnown RBP21.42■■□□□ 1.02
CHMP5-201ENST00000223500 KDM3BQ7LBC6 1761 aa21.42■■□□□ 1.02
CHMP5-201ENST00000223500 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
CHMP5-201ENST00000223500 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
CHMP5-201ENST00000223500 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
CHMP5-201ENST00000223500 KRT27Q7Z3Y8 459 aa21.39■■□□□ 1.02
CHMP5-201ENST00000223500 TTC5Q8N0Z6 440 aa21.39■■□□□ 1.02
CHMP5-201ENST00000223500 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.02
CHMP5-201ENST00000223500 PRIM1P49642 420 aaKnown RBP21.39■■□□□ 1.01
CHMP5-201ENST00000223500 BCL9O00512 1426 aa21.38■■□□□ 1.01
CHMP5-201ENST00000223500 ZNF790Q6PG37 636 aa21.38■■□□□ 1.01
CHMP5-201ENST00000223500 PIGBQ92521 554 aa21.37■■□□□ 1.01
CHMP5-201ENST00000223500 ACSBG1Q96GR2 724 aa21.37■■□□□ 1.01
CHMP5-201ENST00000223500 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
CHMP5-201ENST00000223500 SOS1Q07889 1333 aaPredicted RBP21.36■■□□□ 1.01
CHMP5-201ENST00000223500 EIF4A1P60842 406 aaKnown RBP21.36■■□□□ 1.01
CHMP5-201ENST00000223500 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
CHMP5-201ENST00000223500 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
CHMP5-201ENST00000223500 KCNQ3O43525 872 aa21.35■■□□□ 1.01
CHMP5-201ENST00000223500 C8orf58Q8NAV2 365 aa21.35■■□□□ 1.01
CHMP5-201ENST00000223500 ZNF428Q96B54 188 aa21.35■■□□□ 1.01
CHMP5-201ENST00000223500 FAM196AQ6ZSG2 479 aa21.34■■□□□ 1.01
CHMP5-201ENST00000223500 CHMP4AQ9BY43 222 aa21.34■■□□□ 1.01
CHMP5-201ENST00000223500 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
CHMP5-201ENST00000223500 VAMP4O75379 141 aa21.33■■□□□ 1.01
CHMP5-201ENST00000223500 FMNL2Q96PY5 1086 aa21.33■■□□□ 1.01
CHMP5-201ENST00000223500 RGS12O14924 1447 aa21.33■■□□□ 1.01
CHMP5-201ENST00000223500 FAM182BQ5T319 152 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 TSPYL6Q8N831 410 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 PAPPAQ13219 1627 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 SBF2Q86WG5 1849 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 HOXB7P09629 217 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 KRT24Q2M2I5 525 aa21.32■■□□□ 1
CHMP5-201ENST00000223500 ATG3Q9NT62 314 aa21.31■■□□□ 1
CHMP5-201ENST00000223500 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
CHMP5-201ENST00000223500 ASAP1Q9ULH1 1129 aa21.3■■□□□ 1
CHMP5-201ENST00000223500 NHSQ6T4R5 1651 aa21.3■■□□□ 1
CHMP5-201ENST00000223500 UBR2Q8IWV8 1755 aa21.3■■□□□ 1
CHMP5-201ENST00000223500 KCNQ2O43526 872 aa21.29■■□□□ 1
CHMP5-201ENST00000223500 RARSP54136 660 aaKnown RBP21.29■■□□□ 1
CHMP5-201ENST00000223500 ALDH1L2Q3SY69 923 aa21.29■■□□□ 1
CHMP5-201ENST00000223500 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
CHMP5-201ENST00000223500 HEG1Q9ULI3 1381 aa21.29■■□□□ 1
CHMP5-201ENST00000223500 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
CHMP5-201ENST00000223500 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
CHMP5-201ENST00000223500 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
CHMP5-201ENST00000223500 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
CHMP5-201ENST00000223500 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
CHMP5-201ENST00000223500 KCPQ6ZWJ8 1503 aa21.26■□□□□ 0.99
CHMP5-201ENST00000223500 CACNA1FO60840 1977 aa21.26■□□□□ 0.99
CHMP5-201ENST00000223500 BCL11BQ9C0K0 894 aaPredicted RBP21.26■□□□□ 0.99
CHMP5-201ENST00000223500 SMC4Q9NTJ3 1288 aa21.26■□□□□ 0.99
CHMP5-201ENST00000223500 BTAF1O14981 1849 aa21.25■□□□□ 0.99
CHMP5-201ENST00000223500 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
CHMP5-201ENST00000223500 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
CHMP5-201ENST00000223500 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.25■□□□□ 0.99
CHMP5-201ENST00000223500 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
CHMP5-201ENST00000223500 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
CHMP5-201ENST00000223500 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
CHMP5-201ENST00000223500 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
CHMP5-201ENST00000223500 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
CHMP5-201ENST00000223500 BCAR3O75815 825 aa21.23■□□□□ 0.99
CHMP5-201ENST00000223500 PALLDQ8WX93 1383 aa21.22■□□□□ 0.99
CHMP5-201ENST00000223500 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
CHMP5-201ENST00000223500 C5P01031 1676 aa21.21■□□□□ 0.99
CHMP5-201ENST00000223500 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.98
CHMP5-201ENST00000223500 TRIM37O94972 964 aa21.2■□□□□ 0.98
CHMP5-201ENST00000223500 BRPF1P55201 1214 aaPredicted RBP21.2■□□□□ 0.98
CHMP5-201ENST00000223500 NECTIN2Q92692 538 aa21.2■□□□□ 0.98
CHMP5-201ENST00000223500 PRAMEF22A3QJZ6 481 aa21.2■□□□□ 0.98
CHMP5-201ENST00000223500 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
CHMP5-201ENST00000223500 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
CHMP5-201ENST00000223500 RRP1P56182 461 aaKnown RBP21.2■□□□□ 0.98
CHMP5-201ENST00000223500 PTF1AQ7RTS3 328 aa21.2■□□□□ 0.98
CHMP5-201ENST00000223500 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
CHMP5-201ENST00000223500 KIF16BQ96L93 1317 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 LOC102724428A0A0B4J2F2 783 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 SIK1P57059 783 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 USP16Q9Y5T5 823 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 RNF123Q5XPI4 1314 aa21.19■□□□□ 0.98
CHMP5-201ENST00000223500 IPO8O15397 1037 aaKnown RBP21.18■□□□□ 0.98
CHMP5-201ENST00000223500 STARD3NLO95772 234 aa21.18■□□□□ 0.98
CHMP5-201ENST00000223500 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
CHMP5-201ENST00000223500 ATP6V1AP38606 617 aa21.17■□□□□ 0.98
CHMP5-201ENST00000223500 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
CHMP5-201ENST00000223500 FRAT1Q92837 279 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms