RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 PDCL3Q9H2J4 239 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 SCAF11Q99590 1463 aaKnown RBP15.98■□□□□ 0.15
LAMB1-201ENST00000222399 SMTNL1A8MU46 457 aa15.98■□□□□ 0.15
LAMB1-201ENST00000222399 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
LAMB1-201ENST00000222399 IFIT1P09914 478 aaKnown RBP15.98■□□□□ 0.15
LAMB1-201ENST00000222399 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
LAMB1-201ENST00000222399 MCM4P33991 863 aa15.97■□□□□ 0.15
LAMB1-201ENST00000222399 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
LAMB1-201ENST00000222399 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
LAMB1-201ENST00000222399 CAVIN4Q5BKX8 364 aa15.97■□□□□ 0.15
LAMB1-201ENST00000222399 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
LAMB1-201ENST00000222399 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.15
LAMB1-201ENST00000222399 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 PTPRCP08575 1304 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 CCDC181Q5TID7 509 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 ABCF2Q9UG63 623 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
LAMB1-201ENST00000222399 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
LAMB1-201ENST00000222399 ZNF76P36508 570 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 PLEKHH1Q9ULM0 1364 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
LAMB1-201ENST00000222399 SMARCA5O60264 1052 aaPredicted RBP15.95■□□□□ 0.14
LAMB1-201ENST00000222399 ZPR1O75312 459 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 HMGB1P09429 215 aaKnown RBP15.95■□□□□ 0.14
LAMB1-201ENST00000222399 CCDC112Q8NEF3 446 aa15.95■□□□□ 0.14
LAMB1-201ENST00000222399 SSBP05455 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
LAMB1-201ENST00000222399 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
LAMB1-201ENST00000222399 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
LAMB1-201ENST00000222399 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
LAMB1-201ENST00000222399 DDX11Q96FC9 970 aa15.94■□□□□ 0.14
LAMB1-201ENST00000222399 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
LAMB1-201ENST00000222399 IFIT5Q13325 482 aaKnown RBP15.94■□□□□ 0.14
LAMB1-201ENST00000222399 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
LAMB1-201ENST00000222399 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 CCDC196A0A1B0GTZ2 297 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 USP5P45974 858 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 NOS1P29475 1434 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 CCDC83Q8IWF9 413 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
LAMB1-201ENST00000222399 AXDND1Q5T1B0 1012 aaPredicted RBP15.93■□□□□ 0.14
LAMB1-201ENST00000222399 SEC63Q9UGP8 760 aaKnown RBP15.93■□□□□ 0.14
LAMB1-201ENST00000222399 SLC5A1P13866 664 aa15.92■□□□□ 0.14
LAMB1-201ENST00000222399 GOLGA6L10A6NI86 522 aa15.92■□□□□ 0.14
LAMB1-201ENST00000222399 IQCEQ6IPM2 695 aa15.92■□□□□ 0.14
LAMB1-201ENST00000222399 ERLIN1O75477 346 aa15.92■□□□□ 0.14
LAMB1-201ENST00000222399 NAPBQ9H115 298 aa15.92■□□□□ 0.14
LAMB1-201ENST00000222399 DENND4BO75064 1496 aaPredicted RBP15.92■□□□□ 0.14
LAMB1-201ENST00000222399 MPHOSPH10O00566 681 aaKnown RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 MPRIPQ6WCQ1 1025 aa15.91■□□□□ 0.14
LAMB1-201ENST00000222399 H0YHG0 523 aa15.91■□□□□ 0.14
LAMB1-201ENST00000222399 IDI1Q13907 227 aa15.91■□□□□ 0.14
LAMB1-201ENST00000222399 SKIDA1Q1XH10 827 aa15.91■□□□□ 0.14
LAMB1-201ENST00000222399 LRRFIP2Q9Y608 721 aaKnown RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 C14orf93Q9H972 538 aaKnown RBP15.91■□□□□ 0.14
LAMB1-201ENST00000222399 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
LAMB1-201ENST00000222399 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 LEKR1Q6ZMV7 388 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 SCAND2PQ9GZW5 306 aaPredicted RBP15.9■□□□□ 0.14
LAMB1-201ENST00000222399 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 MKNK2Q9HBH9 465 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 TRMT112Q9UI30 125 aaKnown RBP15.9■□□□□ 0.14
LAMB1-201ENST00000222399 FANCAO15360 1455 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 F6X3S4 739 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 FBXO31Q5XUX0 539 aaPredicted RBP15.9■□□□□ 0.14
LAMB1-201ENST00000222399 PAF1Q8N7H5 531 aa15.9■□□□□ 0.14
LAMB1-201ENST00000222399 CCDC66A2RUB6 948 aa15.89■□□□□ 0.14
LAMB1-201ENST00000222399 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.14
LAMB1-201ENST00000222399 ANKRD36BQ8N2N9 1353 aa15.89■□□□□ 0.13
LAMB1-201ENST00000222399 DZIP1Q86YF9 867 aaKnown RBP15.89■□□□□ 0.13
LAMB1-201ENST00000222399 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
LAMB1-201ENST00000222399 EIF5P55010 431 aaKnown RBP15.89■□□□□ 0.13
LAMB1-201ENST00000222399 FLIIQ13045 1269 aa15.89■□□□□ 0.13
LAMB1-201ENST00000222399 RNF41Q9H4P4 317 aaPredicted RBP15.89■□□□□ 0.13
LAMB1-201ENST00000222399 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
LAMB1-201ENST00000222399 TEX13AQ9BXU3 409 aaPredicted RBP15.89■□□□□ 0.13
LAMB1-201ENST00000222399 TNIP1Q15025 636 aa15.88■□□□□ 0.13
LAMB1-201ENST00000222399 CTCFLQ8NI51 663 aaPredicted RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 CCDC8Q9H0W5 538 aaPredicted RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
LAMB1-201ENST00000222399 IL16Q14005 1332 aa15.88■□□□□ 0.13
LAMB1-201ENST00000222399 EPB41L2O43491 1005 aaKnown RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 FOXO3O43524 673 aa15.88■□□□□ 0.13
LAMB1-201ENST00000222399 CRACR2BQ8N4Y2 399 aaPredicted RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
LAMB1-201ENST00000222399 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 SEPT11Q9NVA2 429 aaKnown RBP15.88■□□□□ 0.13
LAMB1-201ENST00000222399 ZNF213O14771 459 aa15.87■□□□□ 0.13
LAMB1-201ENST00000222399 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
LAMB1-201ENST00000222399 TRIM27P14373 513 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms