RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
GCDH-201ENST00000222214 RNMTO43148 476 aaKnown RBP22.1■■□□□ 1.13
GCDH-201ENST00000222214 FLIIQ13045 1269 aa22.1■■□□□ 1.13
GCDH-201ENST00000222214 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
GCDH-201ENST00000222214 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
GCDH-201ENST00000222214 UPF2Q9HAU5 1272 aaKnown RBP22.1■■□□□ 1.13
GCDH-201ENST00000222214 LGR6Q9HBX8 967 aa22.1■■□□□ 1.13
GCDH-201ENST00000222214 N4BP2Q86UW6 1770 aaPredicted RBP22.1■■□□□ 1.13
GCDH-201ENST00000222214 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
GCDH-201ENST00000222214 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
GCDH-201ENST00000222214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.1■■□□□ 1.13
GCDH-201ENST00000222214 HDGFL1Q5TGJ6 251 aa22.09■■□□□ 1.13
GCDH-201ENST00000222214 G2E3Q7L622 706 aa22.09■■□□□ 1.13
GCDH-201ENST00000222214 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
GCDH-201ENST00000222214 BTBD11A6QL63 1104 aa22.08■■□□□ 1.12
GCDH-201ENST00000222214 FKBP5Q13451 457 aaPredicted RBP22.07■■□□□ 1.12
GCDH-201ENST00000222214 ANKRD45Q5TZF3 282 aa22.07■■□□□ 1.12
GCDH-201ENST00000222214 DCTPP1Q9H773 170 aa22.07■■□□□ 1.12
GCDH-201ENST00000222214 MPRIPQ6WCQ1 1025 aa22.07■■□□□ 1.12
GCDH-201ENST00000222214 LNPKQ9C0E8 428 aa22.07■■□□□ 1.12
GCDH-201ENST00000222214 SIPA1L3O60292 1781 aaPredicted RBP22.06■■□□□ 1.12
GCDH-201ENST00000222214 TATP17735 454 aaPredicted RBP22.06■■□□□ 1.12
GCDH-201ENST00000222214 NLRP2Q9NX02 1062 aa22.06■■□□□ 1.12
GCDH-201ENST00000222214 SLAIN2Q9P270 581 aa22.06■■□□□ 1.12
GCDH-201ENST00000222214 SOS2Q07890 1332 aaPredicted RBP22.05■■□□□ 1.12
GCDH-201ENST00000222214 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
GCDH-201ENST00000222214 CEP85Q6P2H3 762 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 SLC4A10Q6U841 1118 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 SPG7Q9UQ90 795 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 HMMRO75330 724 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 MYT1Q01538 1121 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 MEIS3Q99687 375 aa22.05■■□□□ 1.12
GCDH-201ENST00000222214 GNAI3P08754 354 aa22.04■■□□□ 1.12
GCDH-201ENST00000222214 F6X3S4 739 aa22.03■■□□□ 1.12
GCDH-201ENST00000222214 CSB-PGBD3P0DP91 1061 aa22.03■■□□□ 1.12
GCDH-201ENST00000222214 BMP2KLQ5H9B9 411 aa22.03■■□□□ 1.12
GCDH-201ENST00000222214 CABLES1Q8TDN4 633 aa22.02■■□□□ 1.12
GCDH-201ENST00000222214 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.12
GCDH-201ENST00000222214 SCN11AQ9UI33 1791 aa22.01■■□□□ 1.11
GCDH-201ENST00000222214 HEG1Q9ULI3 1381 aa22.01■■□□□ 1.11
GCDH-201ENST00000222214 GNAI2P04899 355 aa22.01■■□□□ 1.11
GCDH-201ENST00000222214 SEC24BO95487 1268 aa22■■□□□ 1.11
GCDH-201ENST00000222214 NECTIN2Q92692 538 aa22■■□□□ 1.11
GCDH-201ENST00000222214 PKD1L3Q7Z443 1732 aa22■■□□□ 1.11
GCDH-201ENST00000222214 MEGF6O75095 1541 aa21.99■■□□□ 1.11
GCDH-201ENST00000222214 IFNL2Q8IZJ0 200 aa21.99■■□□□ 1.11
GCDH-201ENST00000222214 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
GCDH-201ENST00000222214 PHKG2P15735 406 aa21.98■■□□□ 1.11
GCDH-201ENST00000222214 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
GCDH-201ENST00000222214 TBC1D32Q96NH3 1257 aa21.98■■□□□ 1.11
GCDH-201ENST00000222214 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
GCDH-201ENST00000222214 EIF5BO60841 1220 aaKnown RBP21.97■■□□□ 1.11
GCDH-201ENST00000222214 CHRNA2Q15822 529 aa21.97■■□□□ 1.11
GCDH-201ENST00000222214 NHSL1Q5SYE7 1610 aa21.97■■□□□ 1.11
GCDH-201ENST00000222214 KCNQ3O43525 872 aa21.96■■□□□ 1.11
GCDH-201ENST00000222214 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
GCDH-201ENST00000222214 CHPF2Q9P2E5 772 aa21.96■■□□□ 1.11
GCDH-201ENST00000222214 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
GCDH-201ENST00000222214 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
GCDH-201ENST00000222214 MRC1P22897 1456 aa21.95■■□□□ 1.1
GCDH-201ENST00000222214 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
GCDH-201ENST00000222214 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
GCDH-201ENST00000222214 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
GCDH-201ENST00000222214 DCAF5Q96JK2 942 aa21.94■■□□□ 1.1
GCDH-201ENST00000222214 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
GCDH-201ENST00000222214 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
GCDH-201ENST00000222214 SRCIN1Q9C0H9 1055 aa21.93■■□□□ 1.1
GCDH-201ENST00000222214 BECN1Q14457 450 aa21.92■■□□□ 1.1
GCDH-201ENST00000222214 DNAAF4Q8WXU2 420 aa21.92■■□□□ 1.1
GCDH-201ENST00000222214 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
GCDH-201ENST00000222214 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
GCDH-201ENST00000222214 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
GCDH-201ENST00000222214 HYPKQ9NX55 129 aa21.91■■□□□ 1.1
GCDH-201ENST00000222214 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
GCDH-201ENST00000222214 USP44Q9H0E7 712 aa21.9■■□□□ 1.1
GCDH-201ENST00000222214 COL5A2P05997 1499 aaPredicted RBP21.9■■□□□ 1.1
GCDH-201ENST00000222214 C22orf23Q9BZE7 217 aa21.88■■□□□ 1.09
GCDH-201ENST00000222214 PI4KAP2A4QPH2 592 aa21.88■■□□□ 1.09
GCDH-201ENST00000222214 PI4KAP1Q8N8J0 262 aa21.88■■□□□ 1.09
GCDH-201ENST00000222214 HDAC5Q9UQL6 1122 aa21.88■■□□□ 1.09
GCDH-201ENST00000222214 CYP27B1O15528 508 aa21.87■■□□□ 1.09
GCDH-201ENST00000222214 MFAP1P55081 439 aaKnown RBP21.87■■□□□ 1.09
GCDH-201ENST00000222214 BEND3Q5T5X7 828 aa21.87■■□□□ 1.09
GCDH-201ENST00000222214 DDX21Q9NR30 783 aaKnown RBP eCLIP21.87■■□□□ 1.09
GCDH-201ENST00000222214 DDX58O95786 925 aaKnown RBP21.87■■□□□ 1.09
GCDH-201ENST00000222214 TOM1L2Q6ZVM7 507 aa21.87■■□□□ 1.09
GCDH-201ENST00000222214 ADCY9O60503 1353 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 PCDH11XQ9BZA7 1347 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 PCDH11YQ9BZA8 1340 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 ALDH1L1O75891 902 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 TTC22Q5TAA0 569 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 NFATC2IPQ8NCF5 419 aa21.86■■□□□ 1.09
GCDH-201ENST00000222214 LRRFIP2Q9Y608 721 aaKnown RBP21.86■■□□□ 1.09
GCDH-201ENST00000222214 CDC45O75419 566 aa21.85■■□□□ 1.09
GCDH-201ENST00000222214 KSR2Q6VAB6 950 aa21.85■■□□□ 1.09
GCDH-201ENST00000222214 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
GCDH-201ENST00000222214 TTC5Q8N0Z6 440 aa21.85■■□□□ 1.09
GCDH-201ENST00000222214 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
GCDH-201ENST00000222214 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
GCDH-201ENST00000222214 RBM25P49756 843 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms