RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 CDC45O75419 566 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 F6X3S4 739 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
VPS18-201ENST00000220509 MMP14P50281 582 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 CBX1P83916 185 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
VPS18-201ENST00000220509 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
VPS18-201ENST00000220509 CABLES1Q8TDN4 633 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 PRPF40AO75400 957 aaKnown RBP12.74□□□□□ -0.37
VPS18-201ENST00000220509 PSEN1P49768 467 aa12.74□□□□□ -0.37
VPS18-201ENST00000220509 NEXMIFQ5QGS0 1516 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 NPHP1O15259 732 aa12.73□□□□□ -0.37
VPS18-201ENST00000220509 GNAI3P08754 354 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 EVA1CP58658 441 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 GOLIM4O00461 696 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 GNAI2P04899 355 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
VPS18-201ENST00000220509 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
VPS18-201ENST00000220509 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
VPS18-201ENST00000220509 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
VPS18-201ENST00000220509 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
VPS18-201ENST00000220509 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
VPS18-201ENST00000220509 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
VPS18-201ENST00000220509 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.38
VPS18-201ENST00000220509 CHRNA2Q15822 529 aa12.71□□□□□ -0.38
VPS18-201ENST00000220509 CCDC27Q2M243 656 aa12.71□□□□□ -0.38
VPS18-201ENST00000220509 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.38
VPS18-201ENST00000220509 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
VPS18-201ENST00000220509 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
VPS18-201ENST00000220509 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
VPS18-201ENST00000220509 TNNT1P13805 278 aa12.7□□□□□ -0.38
VPS18-201ENST00000220509 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
VPS18-201ENST00000220509 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
VPS18-201ENST00000220509 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
VPS18-201ENST00000220509 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
VPS18-201ENST00000220509 KAT6BQ8WYB5 2073 aa12.7□□□□□ -0.38
VPS18-201ENST00000220509 ZFYVE9O95405 1425 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 GNAT3A8MTJ3 354 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 TSC1Q92574 1164 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
VPS18-201ENST00000220509 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 IL13P35225 146 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
VPS18-201ENST00000220509 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
VPS18-201ENST00000220509 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
VPS18-201ENST00000220509 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
VPS18-201ENST00000220509 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
VPS18-201ENST00000220509 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS18-201ENST00000220509 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
VPS18-201ENST00000220509 EYA1Q99502 592 aa12.68□□□□□ -0.38
VPS18-201ENST00000220509 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
VPS18-201ENST00000220509 SYCE3A1L190 88 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
VPS18-201ENST00000220509 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 ZRSR1Q15695 479 aaKnown RBP12.67□□□□□ -0.38
VPS18-201ENST00000220509 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 IL16Q14005 1332 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
VPS18-201ENST00000220509 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
VPS18-201ENST00000220509 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
VPS18-201ENST00000220509 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
VPS18-201ENST00000220509 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
VPS18-201ENST00000220509 NEK4P51957 841 aa12.66□□□□□ -0.38
VPS18-201ENST00000220509 POLR1AO95602 1720 aaPredicted RBP12.66□□□□□ -0.38
VPS18-201ENST00000220509 PTPRMP28827 1452 aa12.66□□□□□ -0.38
VPS18-201ENST00000220509 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
VPS18-201ENST00000220509 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
VPS18-201ENST00000220509 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
VPS18-201ENST00000220509 NRXN1Q9ULB1 1477 aa12.66□□□□□ -0.38
VPS18-201ENST00000220509 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
VPS18-201ENST00000220509 MYL6BP14649 208 aa12.65□□□□□ -0.38
VPS18-201ENST00000220509 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
VPS18-201ENST00000220509 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
VPS18-201ENST00000220509 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms