RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PHF14O94880 888 aa11.46□□□□□ -0.58
CCDC113-201ENST00000219299 NOL8Q76FK4 1167 aaKnown RBP11.46□□□□□ -0.58
CCDC113-201ENST00000219299 AK7Q96M32 723 aa11.46□□□□□ -0.58
CCDC113-201ENST00000219299 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.58
CCDC113-201ENST00000219299 PCDH11XQ9BZA7 1347 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 PCDH11YQ9BZA8 1340 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 A0A087WZG4 1122 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 ERC2O15083 957 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
CCDC113-201ENST00000219299 SETD1BQ9UPS6 1966 aaKnown RBP11.45□□□□□ -0.58
CCDC113-201ENST00000219299 APPP05067 770 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
CCDC113-201ENST00000219299 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
CCDC113-201ENST00000219299 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
CCDC113-201ENST00000219299 PDE4AP27815 886 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
CCDC113-201ENST00000219299 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
CCDC113-201ENST00000219299 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
CCDC113-201ENST00000219299 CDCA7Q9BWT1 371 aaPredicted RBP11.44□□□□□ -0.58
CCDC113-201ENST00000219299 EXOC6BQ9Y2D4 811 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
CCDC113-201ENST00000219299 XAGE3Q8WTP9 111 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 IL1RAPL2Q9NP60 686 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 ADGRL3Q9HAR2 1447 aa11.44□□□□□ -0.58
CCDC113-201ENST00000219299 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
CCDC113-201ENST00000219299 TNNT3P45378 269 aaPredicted RBP11.43□□□□□ -0.58
CCDC113-201ENST00000219299 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
CCDC113-201ENST00000219299 RUFY2Q8WXA3 655 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 ARID3AQ99856 593 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 ATP7BP35670 1465 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 ANO2Q9NQ90 1003 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 RPAP2Q8IXW5 612 aaPredicted RBP11.43□□□□□ -0.58
CCDC113-201ENST00000219299 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
CCDC113-201ENST00000219299 INSRP06213 1382 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 NOL10Q9BSC4 688 aaKnown RBP11.42□□□□□ -0.58
CCDC113-201ENST00000219299 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 RFC4P35249 363 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 UBE3BQ7Z3V4 1068 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 VAMP4O75379 141 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 WASHC4Q2M389 1173 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 ZNF790Q6PG37 636 aa11.42□□□□□ -0.58
CCDC113-201ENST00000219299 DNAJC2Q99543 621 aaKnown RBP11.42□□□□□ -0.58
CCDC113-201ENST00000219299 ERC1Q8IUD2 1116 aa11.41□□□□□ -0.58
CCDC113-201ENST00000219299 LRRCC1Q9C099 1032 aa11.41□□□□□ -0.58
CCDC113-201ENST00000219299 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
CCDC113-201ENST00000219299 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
CCDC113-201ENST00000219299 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
CCDC113-201ENST00000219299 PTPRCP08575 1304 aa11.41□□□□□ -0.58
CCDC113-201ENST00000219299 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
CCDC113-201ENST00000219299 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
CCDC113-201ENST00000219299 FSD1Q9BTV5 496 aa11.4□□□□□ -0.58
CCDC113-201ENST00000219299 PIK3C2BO00750 1634 aa11.4□□□□□ -0.58
CCDC113-201ENST00000219299 REC8O95072 547 aa11.4□□□□□ -0.58
CCDC113-201ENST00000219299 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
CCDC113-201ENST00000219299 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
CCDC113-201ENST00000219299 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
CCDC113-201ENST00000219299 ERBB3P21860 1342 aa11.39□□□□□ -0.59
CCDC113-201ENST00000219299 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
CCDC113-201ENST00000219299 IGHMBP2P38935 993 aaKnown RBP11.39□□□□□ -0.59
CCDC113-201ENST00000219299 AACSQ86V21 672 aa11.39□□□□□ -0.59
CCDC113-201ENST00000219299 CCDC158Q5M9N0 1113 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 IL17REQ8NFR9 667 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 SLC52A2Q9HAB3 445 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 CWC25Q9NXE8 425 aaPredicted RBP11.38□□□□□ -0.59
CCDC113-201ENST00000219299 CHL1O00533 1208 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
CCDC113-201ENST00000219299 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
CCDC113-201ENST00000219299 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 NEXMIFQ5QGS0 1516 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
CCDC113-201ENST00000219299 ZKSCAN1P17029 563 aaPredicted RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 FAM182BQ5T319 152 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 INTS3Q68E01 1043 aaKnown RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 WDR17Q8IZU2 1322 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 PHKG2P15735 406 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 MEIS3Q99687 375 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 KSR2Q6VAB6 950 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 CHD1LQ86WJ1 897 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
CCDC113-201ENST00000219299 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
CCDC113-201ENST00000219299 ST18O60284 1047 aa11.36□□□□□ -0.59
CCDC113-201ENST00000219299 A1BGP04217 495 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms