RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
SIX4-201ENST00000216513 OGFOD1Q8N543 542 aa16.46■□□□□ 0.23
SIX4-201ENST00000216513 LRRCC1Q9C099 1032 aa16.46■□□□□ 0.23
SIX4-201ENST00000216513 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
SIX4-201ENST00000216513 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 NF2P35240 595 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 ZNF76P36508 570 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 CDK5RAP3Q96JB5 506 aa16.45■□□□□ 0.22
SIX4-201ENST00000216513 RIMBP2O15034 1052 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 ANXA1P04083 346 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 DBF4Q9UBU7 674 aaPredicted RBP16.44■□□□□ 0.22
SIX4-201ENST00000216513 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
SIX4-201ENST00000216513 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 HIP1O00291 1037 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 SLF2Q8IX21 1173 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
SIX4-201ENST00000216513 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 MAP3K2Q9Y2U5 619 aa16.44■□□□□ 0.22
SIX4-201ENST00000216513 DISP3Q9P2K9 1392 aa16.43■□□□□ 0.22
SIX4-201ENST00000216513 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
SIX4-201ENST00000216513 PSMA5P28066 241 aa16.43■□□□□ 0.22
SIX4-201ENST00000216513 VEZTQ9HBM0 779 aa16.43■□□□□ 0.22
SIX4-201ENST00000216513 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
SIX4-201ENST00000216513 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
SIX4-201ENST00000216513 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
SIX4-201ENST00000216513 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 F6X3S4 739 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
SIX4-201ENST00000216513 TSR1Q2NL82 804 aaKnown RBP16.42■□□□□ 0.22
SIX4-201ENST00000216513 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
SIX4-201ENST00000216513 TPTE2Q6XPS3 522 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 SCLT1Q96NL6 688 aa16.42■□□□□ 0.22
SIX4-201ENST00000216513 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
SIX4-201ENST00000216513 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
SIX4-201ENST00000216513 ZNF335Q9H4Z2 1342 aaPredicted RBP16.41■□□□□ 0.22
SIX4-201ENST00000216513 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
SIX4-201ENST00000216513 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
SIX4-201ENST00000216513 TMEM87AQ8NBN3 555 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 BIN2Q9UBW5 565 aaPredicted RBP16.4■□□□□ 0.22
SIX4-201ENST00000216513 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
SIX4-201ENST00000216513 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 NYXQ9GZU5 481 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
SIX4-201ENST00000216513 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 BICD2Q8TD16 824 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
SIX4-201ENST00000216513 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
SIX4-201ENST00000216513 ZNF287Q9HBT7 754 aa16.39■□□□□ 0.21
SIX4-201ENST00000216513 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.21
SIX4-201ENST00000216513 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
SIX4-201ENST00000216513 BCS1LQ9Y276 419 aa16.39■□□□□ 0.21
SIX4-201ENST00000216513 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
SIX4-201ENST00000216513 ZNF526Q8TF50 670 aaPredicted RBP16.38■□□□□ 0.21
SIX4-201ENST00000216513 NSFL1CQ9UNZ2 370 aaKnown RBP16.38■□□□□ 0.21
SIX4-201ENST00000216513 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
SIX4-201ENST00000216513 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
SIX4-201ENST00000216513 RNF214Q8ND24 703 aa16.38■□□□□ 0.21
SIX4-201ENST00000216513 ZC3H12CQ9C0D7 883 aaKnown RBP16.37■□□□□ 0.21
SIX4-201ENST00000216513 IQSEC3Q9UPP2 1182 aaPredicted RBP16.37■□□□□ 0.21
SIX4-201ENST00000216513 NPATQ14207 1427 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 PATL2C9JE40 543 aaKnown RBP16.37■□□□□ 0.21
SIX4-201ENST00000216513 CDC45O75419 566 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 MAP3K12Q12852 859 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
SIX4-201ENST00000216513 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
SIX4-201ENST00000216513 TMEM94Q12767 1356 aa16.37■□□□□ 0.21
SIX4-201ENST00000216513 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
SIX4-201ENST00000216513 TRIM37O94972 964 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 TPM3P06753 285 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 PTMSP20962 102 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 LTKP29376 864 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 STK3Q13188 491 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 FAM182BQ5T319 152 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 CABP5Q9NP86 173 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 EPS15P42566 896 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
SIX4-201ENST00000216513 CNBD1Q8NA66 436 aa16.35■□□□□ 0.21
SIX4-201ENST00000216513 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
SIX4-201ENST00000216513 TRPM2O94759 1503 aa16.35■□□□□ 0.21
SIX4-201ENST00000216513 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
SIX4-201ENST00000216513 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
SIX4-201ENST00000216513 BECN2A8MW95 431 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms