RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 BECN1Q14457 450 aa9.96□□□□□ -0.81
HMGXB4-201ENST00000216106 HDGFL1Q5TGJ6 251 aa9.96□□□□□ -0.81
HMGXB4-201ENST00000216106 PLEKHO1Q53GL0 409 aaPredicted RBP9.96□□□□□ -0.82
HMGXB4-201ENST00000216106 AKAP4Q5JQC9 854 aa9.96□□□□□ -0.82
HMGXB4-201ENST00000216106 TEFQ10587 303 aa9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 EIF2S2P20042 333 aaKnown RBP9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 KCNQ3O43525 872 aa9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 C16orf71Q8IYS4 520 aaPredicted RBP9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 SOS1Q07889 1333 aaPredicted RBP9.95□□□□□ -0.82
HMGXB4-201ENST00000216106 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 EIF4A1P60842 406 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 AMOTQ4VCS5 1084 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 ERBB3P21860 1342 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 PLEKHM2Q8IWE5 1019 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 GSPT1P15170 499 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 OTUD7AQ8TE49 926 aaPredicted RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 SLKQ9H2G2 1235 aaPredicted RBP9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 DCCP43146 1447 aa9.94□□□□□ -0.82
HMGXB4-201ENST00000216106 NFKBIBQ15653 356 aa9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 GNAI2P04899 355 aa9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 CABLES1Q8TDN4 633 aa9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 HMMRO75330 724 aa9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 DEKP35659 375 aaKnown RBP9.93□□□□□ -0.82
HMGXB4-201ENST00000216106 CHPF2Q9P2E5 772 aa9.92□□□□□ -0.82
HMGXB4-201ENST00000216106 USP35Q9P2H5 1018 aa9.92□□□□□ -0.82
HMGXB4-201ENST00000216106 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
HMGXB4-201ENST00000216106 PXDNLA1KZ92 1463 aa9.92□□□□□ -0.82
HMGXB4-201ENST00000216106 NPHP3Q7Z494 1330 aa9.92□□□□□ -0.82
HMGXB4-201ENST00000216106 ANXA1P04083 346 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 XIRP1Q702N8 1843 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 GNAI3P08754 354 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 TTC22Q5TAA0 569 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 CRYBG1Q9Y4K1 1723 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 TNS3Q68CZ2 1445 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 NCOA3Q9Y6Q9 1424 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 PNMA6EA0A0J9YXQ4 647 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 LRRFIP2Q9Y608 721 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-201ENST00000216106 CDC45O75419 566 aa9.9□□□□□ -0.82
HMGXB4-201ENST00000216106 HOXB7P09629 217 aa9.9□□□□□ -0.82
HMGXB4-201ENST00000216106 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
HMGXB4-201ENST00000216106 CHRNA2Q15822 529 aa9.9□□□□□ -0.82
HMGXB4-201ENST00000216106 COL18A1P39060 1754 aa9.9□□□□□ -0.82
HMGXB4-201ENST00000216106 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.83
HMGXB4-201ENST00000216106 RAPGEF4Q8WZA2 1011 aa9.9□□□□□ -0.83
HMGXB4-201ENST00000216106 USP44Q9H0E7 712 aa9.9□□□□□ -0.83
HMGXB4-201ENST00000216106 PRAMEF22A3QJZ6 481 aa9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 FRAT2O75474 233 aaPredicted RBP9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 UBTFL1P0CB47 393 aaPredicted RBP9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 MEGF6O75095 1541 aa9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 PI4KAP2A4QPH2 592 aa9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 PI4KAP1Q8N8J0 262 aa9.89□□□□□ -0.83
HMGXB4-201ENST00000216106 ADAMTS7Q9UKP4 1686 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 SRCIN1Q9C0H9 1055 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 ANTXR1Q9H6X2 564 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 SCN11AQ9UI33 1791 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 SDSP20132 328 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 ATP8B2P98198 1209 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 DNAAF4Q8WXU2 420 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 SPATA31A3Q5VYP0 1347 aa9.88□□□□□ -0.83
HMGXB4-201ENST00000216106 PROSER3Q2NL68 480 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 STRCQ7RTU9 1775 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 TATP17735 454 aaPredicted RBP9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 HSCBQ8IWL3 235 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 ADCY9O60503 1353 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 KIF2CQ99661 725 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 LRRCC1Q9C099 1032 aa9.87□□□□□ -0.83
HMGXB4-201ENST00000216106 NBPF7P0C2Y1 421 aaPredicted RBP9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 SLC39A6Q13433 755 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 BEND3Q5T5X7 828 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 LMTK3Q96Q04 1460 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 PDE1AP54750 535 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 PHKG2P15735 406 aa9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 IBTKQ9P2D0 1353 aaPredicted RBP9.86□□□□□ -0.83
HMGXB4-201ENST00000216106 C5P01031 1676 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 PPP1R42Q7Z4L9 355 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
HMGXB4-201ENST00000216106 MAP3K2Q9Y2U5 619 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms