RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 NEFLP07196 543 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
RTCB-201ENST00000216038 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 IL16Q14005 1332 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
RTCB-201ENST00000216038 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 GNAI1P63096 354 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
RTCB-201ENST00000216038 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
RTCB-201ENST00000216038 MYH16Q9H6N6 1097 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
RTCB-201ENST00000216038 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 ADAMTS7Q9UKP4 1686 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 CABP4P57796 275 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
RTCB-201ENST00000216038 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
RTCB-201ENST00000216038 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
RTCB-201ENST00000216038 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
RTCB-201ENST00000216038 BTBD11A6QL63 1104 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
RTCB-201ENST00000216038 CHL1O00533 1208 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 RXRBP28702 533 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 FKBP8Q14318 412 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
RTCB-201ENST00000216038 KCNQ3O43525 872 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
RTCB-201ENST00000216038 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
RTCB-201ENST00000216038 ITGB4P16144 1822 aa12.88□□□□□ -0.35
RTCB-201ENST00000216038 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
RTCB-201ENST00000216038 MSH5O43196 834 aa12.88□□□□□ -0.35
RTCB-201ENST00000216038 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
RTCB-201ENST00000216038 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
RTCB-201ENST00000216038 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
RTCB-201ENST00000216038 KCNQ2O43526 872 aa12.86□□□□□ -0.35
RTCB-201ENST00000216038 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
RTCB-201ENST00000216038 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
RTCB-201ENST00000216038 PIGBQ92521 554 aa12.86□□□□□ -0.35
RTCB-201ENST00000216038 MRC1P22897 1456 aa12.86□□□□□ -0.35
RTCB-201ENST00000216038 KDM3BQ7LBC6 1761 aa12.85□□□□□ -0.35
RTCB-201ENST00000216038 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
RTCB-201ENST00000216038 KRT27Q7Z3Y8 459 aa12.85□□□□□ -0.35
RTCB-201ENST00000216038 RGS12O14924 1447 aa12.84□□□□□ -0.35
RTCB-201ENST00000216038 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
RTCB-201ENST00000216038 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
RTCB-201ENST00000216038 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
RTCB-201ENST00000216038 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
RTCB-201ENST00000216038 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
RTCB-201ENST00000216038 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
RTCB-201ENST00000216038 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
RTCB-201ENST00000216038 TWISTNBQ3B726 338 aaPredicted RBP12.83□□□□□ -0.36
RTCB-201ENST00000216038 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
RTCB-201ENST00000216038 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
RTCB-201ENST00000216038 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
RTCB-201ENST00000216038 BCL9O00512 1426 aa12.82□□□□□ -0.36
RTCB-201ENST00000216038 ZNF496Q96IT1 587 aaPredicted RBP12.82□□□□□ -0.36
RTCB-201ENST00000216038 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
RTCB-201ENST00000216038 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
RTCB-201ENST00000216038 VAMP4O75379 141 aa12.81□□□□□ -0.36
RTCB-201ENST00000216038 BCAR3O75815 825 aa12.81□□□□□ -0.36
RTCB-201ENST00000216038 ATG3Q9NT62 314 aa12.81□□□□□ -0.36
RTCB-201ENST00000216038 DEKP35659 375 aaKnown RBP12.8□□□□□ -0.36
RTCB-201ENST00000216038 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
RTCB-201ENST00000216038 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
RTCB-201ENST00000216038 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
RTCB-201ENST00000216038 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
RTCB-201ENST00000216038 BTAF1O14981 1849 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 PLIN1O60240 522 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
RTCB-201ENST00000216038 TRIM37O94972 964 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 FAM196AQ6ZSG2 479 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 C5P01031 1676 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
RTCB-201ENST00000216038 NHSQ6T4R5 1651 aa12.77□□□□□ -0.36
RTCB-201ENST00000216038 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
RTCB-201ENST00000216038 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
RTCB-201ENST00000216038 KCNQ4P56696 695 aa12.76□□□□□ -0.37
RTCB-201ENST00000216038 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
RTCB-201ENST00000216038 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
RTCB-201ENST00000216038 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
RTCB-201ENST00000216038 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
RTCB-201ENST00000216038 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
RTCB-201ENST00000216038 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
RTCB-201ENST00000216038 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
RTCB-201ENST00000216038 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
RTCB-201ENST00000216038 ANXA1P04083 346 aa12.75□□□□□ -0.37
RTCB-201ENST00000216038 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
RTCB-201ENST00000216038 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
RTCB-201ENST00000216038 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
RTCB-201ENST00000216038 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
RTCB-201ENST00000216038 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
RTCB-201ENST00000216038 SIK1P57059 783 aa12.73□□□□□ -0.37
RTCB-201ENST00000216038 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
RTCB-201ENST00000216038 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
RTCB-201ENST00000216038 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms