RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 PHF14O94880 888 aa17.48■□□□□ 0.39
SNAP29-201ENST00000215730 HOXC9P31274 260 aa17.48■□□□□ 0.39
SNAP29-201ENST00000215730 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
SNAP29-201ENST00000215730 CPS1P31327 1500 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 RRP9O43818 475 aaKnown RBP17.47■□□□□ 0.39
SNAP29-201ENST00000215730 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 APBB1O00213 710 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 CCDC173Q0VFZ6 552 aa17.47■□□□□ 0.39
SNAP29-201ENST00000215730 PPRC1Q5VV67 1664 aaKnown RBP17.46■□□□□ 0.39
SNAP29-201ENST00000215730 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
SNAP29-201ENST00000215730 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
SNAP29-201ENST00000215730 C1orf167Q5SNV9 1468 aa17.46■□□□□ 0.39
SNAP29-201ENST00000215730 PRR36Q9H6K5 1346 aa17.46■□□□□ 0.39
SNAP29-201ENST00000215730 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
SNAP29-201ENST00000215730 RFC4P35249 363 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 TRIM37O94972 964 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
SNAP29-201ENST00000215730 GAS2L3Q86XJ1 694 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 ADAMTS13Q76LX8 1427 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 PIK3C2BO00750 1634 aa17.45■□□□□ 0.38
SNAP29-201ENST00000215730 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
SNAP29-201ENST00000215730 FAM182BQ5T319 152 aa17.44■□□□□ 0.38
SNAP29-201ENST00000215730 SHPRHQ149N8 1683 aa17.44■□□□□ 0.38
SNAP29-201ENST00000215730 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
SNAP29-201ENST00000215730 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
SNAP29-201ENST00000215730 ANKARQ7Z5J8 1434 aa17.43■□□□□ 0.38
SNAP29-201ENST00000215730 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
SNAP29-201ENST00000215730 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 NCOA3Q9Y6Q9 1424 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 NUCB2P80303 420 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 CAVIN1Q6NZI2 390 aaKnown RBP17.42■□□□□ 0.38
SNAP29-201ENST00000215730 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 TPM2P07951 284 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
SNAP29-201ENST00000215730 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
SNAP29-201ENST00000215730 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
SNAP29-201ENST00000215730 POLKQ9UBT6 870 aa17.41■□□□□ 0.38
SNAP29-201ENST00000215730 RABEP1Q15276 862 aa17.41■□□□□ 0.38
SNAP29-201ENST00000215730 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
SNAP29-201ENST00000215730 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
SNAP29-201ENST00000215730 BAG4O95429 457 aaKnown RBP17.41■□□□□ 0.38
SNAP29-201ENST00000215730 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
SNAP29-201ENST00000215730 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
SNAP29-201ENST00000215730 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
SNAP29-201ENST00000215730 ALKQ9UM73 1620 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 ST18O60284 1047 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 KIAA1211Q6ZU35 1233 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
SNAP29-201ENST00000215730 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
SNAP29-201ENST00000215730 MYL6BP14649 208 aa17.39■□□□□ 0.38
SNAP29-201ENST00000215730 KCNJ4P48050 445 aa17.39■□□□□ 0.38
SNAP29-201ENST00000215730 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.38
SNAP29-201ENST00000215730 CARD10Q9BWT7 1032 aa17.39■□□□□ 0.38
SNAP29-201ENST00000215730 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
SNAP29-201ENST00000215730 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
SNAP29-201ENST00000215730 ZSCAN30Q86W11 494 aa17.39■□□□□ 0.37
SNAP29-201ENST00000215730 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
SNAP29-201ENST00000215730 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
SNAP29-201ENST00000215730 EYA1Q99502 592 aa17.38■□□□□ 0.37
SNAP29-201ENST00000215730 DEPDC5O75140 1603 aa17.38■□□□□ 0.37
SNAP29-201ENST00000215730 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
SNAP29-201ENST00000215730 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
SNAP29-201ENST00000215730 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
SNAP29-201ENST00000215730 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
SNAP29-201ENST00000215730 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
SNAP29-201ENST00000215730 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.37■□□□□ 0.37
SNAP29-201ENST00000215730 MCM10Q7L590 875 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
SNAP29-201ENST00000215730 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
SNAP29-201ENST00000215730 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
SNAP29-201ENST00000215730 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 PTMAP06454 111 aaKnown RBP17.36■□□□□ 0.37
SNAP29-201ENST00000215730 DDIT3P35638 169 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
SNAP29-201ENST00000215730 VAMP4O75379 141 aa17.35■□□□□ 0.37
SNAP29-201ENST00000215730 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
SNAP29-201ENST00000215730 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
SNAP29-201ENST00000215730 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
SNAP29-201ENST00000215730 MYO3AQ8NEV4 1616 aa17.35■□□□□ 0.37
SNAP29-201ENST00000215730 ARHGAP45Q92619 1136 aa17.35■□□□□ 0.37
SNAP29-201ENST00000215730 VWDEQ8N2E2 1590 aa17.35■□□□□ 0.37
SNAP29-201ENST00000215730 MROH2AA6NES4 1674 aa17.34■□□□□ 0.37
SNAP29-201ENST00000215730 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
SNAP29-201ENST00000215730 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms