RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
CHERP-201ENST00000198939 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
CHERP-201ENST00000198939 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
CHERP-201ENST00000198939 ABCC6O95255 1503 aa12.59□□□□□ -0.39
CHERP-201ENST00000198939 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
CHERP-201ENST00000198939 HOXC9P31274 260 aa12.58□□□□□ -0.39
CHERP-201ENST00000198939 LNPKQ9C0E8 428 aa12.58□□□□□ -0.39
CHERP-201ENST00000198939 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.39
CHERP-201ENST00000198939 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.39
CHERP-201ENST00000198939 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
CHERP-201ENST00000198939 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
CHERP-201ENST00000198939 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 FGD1P98174 961 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
CHERP-201ENST00000198939 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
CHERP-201ENST00000198939 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
CHERP-201ENST00000198939 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
CHERP-201ENST00000198939 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
CHERP-201ENST00000198939 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
CHERP-201ENST00000198939 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
CHERP-201ENST00000198939 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
CHERP-201ENST00000198939 CCDC94Q9BW85 323 aaPredicted RBP12.57□□□□□ -0.4
CHERP-201ENST00000198939 DDX19BQ9UMR2 479 aa12.57□□□□□ -0.4
CHERP-201ENST00000198939 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
CHERP-201ENST00000198939 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
CHERP-201ENST00000198939 NFAT5O94916 1531 aa12.56□□□□□ -0.4
CHERP-201ENST00000198939 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
CHERP-201ENST00000198939 MCM5P33992 734 aa12.56□□□□□ -0.4
CHERP-201ENST00000198939 NUCB2P80303 420 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 DDIT3P35638 169 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 TNNT3P45378 269 aaPredicted RBP12.55□□□□□ -0.4
CHERP-201ENST00000198939 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
CHERP-201ENST00000198939 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 CBX1P83916 185 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 RBSNQ9H1K0 784 aa12.55□□□□□ -0.4
CHERP-201ENST00000198939 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
CHERP-201ENST00000198939 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
CHERP-201ENST00000198939 ZNF445P59923 1031 aa12.54□□□□□ -0.4
CHERP-201ENST00000198939 CHRNA2Q15822 529 aa12.54□□□□□ -0.4
CHERP-201ENST00000198939 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
CHERP-201ENST00000198939 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
CHERP-201ENST00000198939 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
CHERP-201ENST00000198939 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
CHERP-201ENST00000198939 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
CHERP-201ENST00000198939 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
CHERP-201ENST00000198939 FBLN1P23142 703 aa12.53□□□□□ -0.4
CHERP-201ENST00000198939 DMTNQ08495 405 aa12.53□□□□□ -0.4
CHERP-201ENST00000198939 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
CHERP-201ENST00000198939 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
CHERP-201ENST00000198939 HDAC1Q13547 482 aaPredicted RBP12.53□□□□□ -0.4
CHERP-201ENST00000198939 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
CHERP-201ENST00000198939 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.4
CHERP-201ENST00000198939 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.4
CHERP-201ENST00000198939 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.4
CHERP-201ENST00000198939 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.4
CHERP-201ENST00000198939 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.4
CHERP-201ENST00000198939 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.4
CHERP-201ENST00000198939 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.4
CHERP-201ENST00000198939 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.41
CHERP-201ENST00000198939 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
CHERP-201ENST00000198939 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
CHERP-201ENST00000198939 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
CHERP-201ENST00000198939 FCHSD2O94868 740 aa12.52□□□□□ -0.41
CHERP-201ENST00000198939 IL13P35225 146 aa12.52□□□□□ -0.41
CHERP-201ENST00000198939 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
CHERP-201ENST00000198939 WDR17Q8IZU2 1322 aa12.51□□□□□ -0.41
CHERP-201ENST00000198939 KIF16BQ96L93 1317 aa12.51□□□□□ -0.41
CHERP-201ENST00000198939 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
CHERP-201ENST00000198939 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
CHERP-201ENST00000198939 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
CHERP-201ENST00000198939 ERBB3P21860 1342 aa12.51□□□□□ -0.41
CHERP-201ENST00000198939 USP21Q9UK80 565 aa12.51□□□□□ -0.41
CHERP-201ENST00000198939 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
CHERP-201ENST00000198939 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
CHERP-201ENST00000198939 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
CHERP-201ENST00000198939 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
CHERP-201ENST00000198939 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
CHERP-201ENST00000198939 SYCE3A1L190 88 aa12.5□□□□□ -0.41
CHERP-201ENST00000198939 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
CHERP-201ENST00000198939 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
CHERP-201ENST00000198939 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
CHERP-201ENST00000198939 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
CHERP-201ENST00000198939 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
CHERP-201ENST00000198939 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 FOXD4L4Q8WXT5 416 aaPredicted RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
CHERP-201ENST00000198939 TRIM27P14373 513 aa12.49□□□□□ -0.41
CHERP-201ENST00000198939 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
CHERP-201ENST00000198939 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CHERP-201ENST00000198939 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
CHERP-201ENST00000198939 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
CHERP-201ENST00000198939 ATF7IPQ6VMQ6 1270 aa12.48□□□□□ -0.41
CHERP-201ENST00000198939 MPNDQ8N594 471 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms