RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 ITGB4P16144 1822 aa13.26□□□□□ -0.29
CD9-201ENST00000009180 CABP4P57796 275 aa13.26□□□□□ -0.29
CD9-201ENST00000009180 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
CD9-201ENST00000009180 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
CD9-201ENST00000009180 PIGBQ92521 554 aa13.26□□□□□ -0.29
CD9-201ENST00000009180 RTF1Q92541 710 aaKnown RBP13.26□□□□□ -0.29
CD9-201ENST00000009180 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
CD9-201ENST00000009180 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
CD9-201ENST00000009180 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
CD9-201ENST00000009180 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
CD9-201ENST00000009180 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
CD9-201ENST00000009180 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
CD9-201ENST00000009180 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
CD9-201ENST00000009180 APBA3O96018 575 aa13.24□□□□□ -0.29
CD9-201ENST00000009180 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
CD9-201ENST00000009180 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
CD9-201ENST00000009180 TEFQ10587 303 aa13.23□□□□□ -0.29
CD9-201ENST00000009180 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
CD9-201ENST00000009180 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
CD9-201ENST00000009180 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
CD9-201ENST00000009180 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
CD9-201ENST00000009180 ATG3Q9NT62 314 aa13.22□□□□□ -0.29
CD9-201ENST00000009180 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
CD9-201ENST00000009180 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
CD9-201ENST00000009180 MIS18AQ9NYP9 233 aa13.21□□□□□ -0.29
CD9-201ENST00000009180 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
CD9-201ENST00000009180 KCNQ3O43525 872 aa13.2□□□□□ -0.3
CD9-201ENST00000009180 KCNQ4P56696 695 aa13.2□□□□□ -0.3
CD9-201ENST00000009180 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 ZBTB22O15209 634 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 BAG6P46379 1132 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
CD9-201ENST00000009180 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
CD9-201ENST00000009180 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
CD9-201ENST00000009180 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
CD9-201ENST00000009180 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
CD9-201ENST00000009180 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CD9-201ENST00000009180 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
CD9-201ENST00000009180 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 LY75O60449 1722 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 TXNRD1Q16881 649 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 PROM2Q8N271 834 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 CAMKK2Q96RR4 588 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
CD9-201ENST00000009180 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
CD9-201ENST00000009180 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
CD9-201ENST00000009180 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 RREB1Q92766 1687 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
CD9-201ENST00000009180 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
CD9-201ENST00000009180 PLSCR1O15162 318 aa13.15□□□□□ -0.3
CD9-201ENST00000009180 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
CD9-201ENST00000009180 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
CD9-201ENST00000009180 ZNF496Q96IT1 587 aaPredicted RBP13.15□□□□□ -0.3
CD9-201ENST00000009180 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
CD9-201ENST00000009180 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
CD9-201ENST00000009180 TJP1Q07157 1748 aa13.15□□□□□ -0.3
CD9-201ENST00000009180 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 CHL1O00533 1208 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 SIK1P57059 783 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 ITPK1Q13572 414 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
CD9-201ENST00000009180 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
CD9-201ENST00000009180 GNAI1P63096 354 aa13.13□□□□□ -0.31
CD9-201ENST00000009180 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
CD9-201ENST00000009180 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
CD9-201ENST00000009180 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
CD9-201ENST00000009180 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
CD9-201ENST00000009180 C5P01031 1676 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
CD9-201ENST00000009180 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 IL16Q14005 1332 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 FANCIQ9NVI1 1328 aa13.12□□□□□ -0.31
CD9-201ENST00000009180 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
CD9-201ENST00000009180 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
CD9-201ENST00000009180 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
CD9-201ENST00000009180 ZNF831Q5JPB2 1677 aa13.1□□□□□ -0.31
CD9-201ENST00000009180 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
CD9-201ENST00000009180 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
CD9-201ENST00000009180 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
CD9-201ENST00000009180 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
CD9-201ENST00000009180 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
CD9-201ENST00000009180 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms