RNA–Protein interactions for RNA: ENSMUST00000092907.11

Rpa1-202, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rpa1, Length 5,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-202ENSMUST00000092907 Irx6Q9ER75 438 aa11.86□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Zeb2Q9R0G7 1215 aa11.86□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Taf7Q9R1C0 341 aa11.86□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Fam13aQ8BGI4 693 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Tmem119Q8R138 280 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Cct4P80315 539 aaKnown RBP11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Nfat5Q9WV30 1534 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Nkx1-2P42580 305 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Ecm2Q5FW85 670 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 OptnQ8K3K8 584 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 CenppQ9CZ92 286 aa11.85□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Atp6v1dP57746 247 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Senp3Q9EP97 568 aaKnown RBP11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Hsp90b1P08113 802 aaKnown RBP11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Atp8b2P98199 1209 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Nek4Q9Z1J2 792 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Arfgef2A2A5R2 1792 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Prim1P20664 417 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 CrklP47941 303 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 ThemisQ8BGW0 636 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Srgap3Q812A2 1099 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Flad1Q8R123 492 aa11.84□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Wnk3Q80XP9 1757 aa11.83□□□□□ -0.51
Rpa1-202ENSMUST00000092907 Rsph3aQ3UFY4 516 aa11.83□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Erc2Q6PH08 957 aa11.83□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Eif4a1P60843 406 aaKnown RBP11.83□□□□□ -0.52
Rpa1-202ENSMUST00000092907 PtprvP70289 1705 aa11.82□□□□□ -0.52
Rpa1-202ENSMUST00000092907 4933402E13RikQ9D4D2 429 aa11.82□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Col1a2Q01149 1372 aa11.82□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Mphosph10Q810V0 681 aaKnown RBP11.82□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Siglec1Q62230 1695 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Nup153E9Q3G8 1462 aaKnown RBP11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Pip4k2bQ80XI4 416 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ppp1r42Q8R1Z4 357 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ppp1r3fQ9JIG4 799 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Cfdp1O88271 295 aaKnown RBP11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 VgfQ0VGU4 617 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 CoilQ5SU73 570 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Irf9Q61179 399 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Sipa1l2Q80TE4 1722 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 ArxO35085 564 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Fkbp4P30416 458 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Smc4Q8CG47 1286 aa11.81□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Gm10093D3YYI8 482 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Hdac1O09106 482 aaKnown RBP11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Fam83gQ5SWY7 812 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Gnl3lQ6PGG6 577 aaKnown RBP11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Tnpo1Q8BFY9 898 aaKnown RBP11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Robo1O89026 1612 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 GckrQ91X44 587 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Phkg2Q9DB30 406 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 HellsQ60848 821 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ppp1r37Q8BKR5 712 aa11.8□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Slc4a10Q5DTL9 1118 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Msh6P54276 1358 aaKnown RBP11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Aox2Q5SGK3 1345 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Adgrb1Q3UHD1 1582 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Disp3A3KFU9 1347 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Cwc27Q3TKY6 469 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Elp1Q7TT37 1333 aaKnown RBP11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Tbc1d9Q3UYK3 1264 aa11.79□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Mcmdc2E9Q956 681 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Cnnm1Q0GA42 951 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 AnlnQ8K298 1121 aaKnown RBP11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ssfa2Q922B9 1252 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Pdzd9Q9D9M4 266 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Atp10bB1AWN4 1474 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Mmp8O70138 465 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ptpdc1Q6NZK8 747 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Rhot2Q8JZN7 620 aa11.78□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Erbb4Q61527 1308 aa11.77□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ankle2Q6P1H6 964 aa11.77□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Ddx58Q6Q899 926 aa11.77□□□□□ -0.52
Rpa1-202ENSMUST00000092907 Gm21663A0A0G2JE01 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Gm7361D3Z6R1 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 5031410I06RikE9Q4E0 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Gm1979E9QAN3 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Gm5862K7N5V5 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Gm10220K7N660 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Casq1O09165 405 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Ppip5k2Q6ZQB6 1129 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Q9D2X8 372 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Speer4bQ9D9F7 267 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Slc5a1Q8C3K6 665 aa11.77□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Hmox1P14901 289 aa11.76□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Aifm3Q3TY86 605 aa11.76□□□□□ -0.53
Rpa1-202ENSMUST00000092907 KinQ8K339 391 aa11.76□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Rbm27Q5SFM8 1060 aaKnown RBP11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 GorabQ8BRM2 368 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 FanclQ9CR14 375 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Znf692Q3U381 531 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 NexnQ7TPW1 607 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Exoc6bA6H5Z3 810 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Map3k2Q61083 619 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Ddx11Q6AXC6 880 aa11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 PhaxQ9JJT9 385 aaKnown RBP11.75□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Tmem87bQ8BKU8 555 aa11.74□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Col15a1O35206 1367 aa11.74□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Prr29B1ARI9 187 aa11.74□□□□□ -0.53
Rpa1-202ENSMUST00000092907 Nol10Q5RJG1 687 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms