RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Mum1Q6DID5 682 aa17.71■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Snw1Q9CSN1 536 aaKnown RBP17.71■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Paf1Q8K2T8 535 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ttc19Q8CC21 365 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Naip5Q9R016 1403 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ccdc66Q6NS45 935 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Brms1Q99N20 246 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Sytl4Q9R0Q1 673 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Btbd11Q6GQW0 1109 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ccdc158Q8CDI6 1109 aa17.7■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Gm1979E9QAN3 267 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Cep135Q6P5D4 1140 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Erich4Q3UNU4 136 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ncapg2Q6DFV1 1138 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ccdc73Q8CDM4 1066 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Erlin1Q91X78 346 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 IncenpQ9WU62 880 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Cep131Q62036 1060 aa17.69■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Bms1Q6PGF5 1284 aaKnown RBP17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Flad1Q8R123 492 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 LlphQ9D945 130 aaKnown RBP17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Cep55Q8BT07 462 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ankrd44B2RXR6 993 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ccdc141E9Q8Q6 1531 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Trap1aP19473 224 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Bcar3Q9QZK2 820 aa17.68■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Themis2Q91YX0 663 aa17.67■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ktn1Q61595 1327 aaKnown RBP17.67■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Riok1Q922Q2 567 aa17.66■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Rfx7F8VPJ6 1459 aa17.66■□□□□ 0.42
Col2a1-201ENSMUST00000023123 DroshaQ5HZJ0 1373 aaKnown RBP17.66■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Plekhd1B2RPU2 505 aa17.66■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ssr1Q9CY50 286 aaKnown RBP17.66■□□□□ 0.42
Col2a1-201ENSMUST00000023123 KdrP35918 1367 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Rbm27Q5SFM8 1060 aaKnown RBP17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Bag3Q9JLV1 577 aaKnown RBP17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 TnikP83510 1323 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Pik3r4Q8VD65 1358 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Gm10093D3YYI8 482 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Hdac1O09106 482 aaKnown RBP17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Usp25P57080 1055 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Ccdc172Q810N9 267 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Rbm5Q91YE7 815 aaKnown RBP17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Rprd2Q6NXI6 1469 aaKnown RBP17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Tacc1Q6Y685 774 aa17.65■□□□□ 0.42
Col2a1-201ENSMUST00000023123 Fkbp5Q64378 456 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Serpina10Q8R121 448 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 A2mQ6GQT1 1474 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 SynmQ70IV5 1561 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 LyarQ08288 388 aaKnown RBP17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cfap157Q0VFX2 523 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Pde1cQ64338 706 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Abcc5Q9R1X5 1436 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Vps18Q8R307 973 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Bbof1Q3V079 533 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ppm1fQ8CGA0 452 aa17.64■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm45140A0A0N4SUM8 220 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Txndc16Q7TN22 820 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Znf131Q8K3J5 619 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gigyf1Q99MR1 1044 aaKnown RBP17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 4930572O03RikQ8C5Y0 211 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Mtmr3Q8K296 1196 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Nol7Q9D7Z3 254 aaKnown RBP17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Catsper2A2ARP9 588 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Map2k1P31938 393 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Atf7Q8R0S1 413 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Smtnl1Q99LM3 459 aa17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Rrs1Q9CYH6 365 aaKnown RBP17.63■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm21698A0A087WQP8 267 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Polr3dQ91WD1 398 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm21663A0A0G2JE01 267 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 5031410I06RikE9Q4E0 267 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cfap73J3QPZ5 306 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm5862K7N5V5 267 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm10220K7N660 267 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Tmem67Q8BR76 992 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Trim34aQ99PP6 485 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Bloc1s2Q9CWG9 143 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cdca8Q8BHX3 289 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Kcnj4P52189 445 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Rnf34Q99KR6 376 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Zeb2Q9R0G7 1215 aa17.62■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Mybbp1aQ7TPV4 1344 aaKnown RBP17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 IkQ9Z1M8 557 aaKnown RBP17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Duxf3A0A0N4SV92 674 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Serpinb6bO08804 377 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gng11P61953 73 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Uspl1Q3ULM6 1089 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ankib1Q6ZPS6 1085 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Speer4bQ9D9F7 267 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Smco2Q9DA21 347 aa17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Knop1Q9Z2Q2 478 aaKnown RBP17.61■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Grin2aP35436 1464 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Fbf1A2A870 1173 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Bin1O08539 588 aaKnown RBP17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ncbp1Q3UYV9 790 aaKnown RBP17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Tubb4aQ9D6F9 444 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ctr9Q62018 1173 aaKnown RBP17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Mrps27Q8BK72 415 aaKnown RBP17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Naa15Q80UM3 865 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms