Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 RNU6-776P-201ENST00000364403 104 ntBASIC-5.09□□□□□ -3.22
USE1Q9NZ43 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.09□□□□□ -3.22
USE1Q9NZ43 RNU6-788P-201ENST00000390967 104 ntBASIC-5.09□□□□□ -3.22
USE1Q9NZ43 MIR548H4-201ENST00000408689 111 ntBASIC-5.09□□□□□ -3.22
USE1Q9NZ43 RNU6-209P-201ENST00000384118 107 ntBASIC-5.1□□□□□ -3.23
USE1Q9NZ43 RNU6-665P-201ENST00000384639 107 ntBASIC-5.1□□□□□ -3.23
USE1Q9NZ43 MIR494-201ENST00000349529 81 ntBASIC-5.12□□□□□ -3.23
USE1Q9NZ43 RNU6-422P-201ENST00000384632 107 ntBASIC-5.13□□□□□ -3.23
USE1Q9NZ43 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.15□□□□□ -3.23
USE1Q9NZ43 RNU6-794P-201ENST00000517261 64 ntBASIC-5.16□□□□□ -3.24
USE1Q9NZ43 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.19□□□□□ -3.24
USE1Q9NZ43 MIR548AL-201ENST00000578416 97 ntBASIC-5.21□□□□□ -3.24
USE1Q9NZ43 RNU6-871P-201ENST00000516122 100 ntBASIC-5.22□□□□□ -3.25
USE1Q9NZ43 U6.111-201ENST00000636093 83 ntBASIC-5.22□□□□□ -3.25
USE1Q9NZ43 RNU6-787P-201ENST00000384032 107 ntBASIC-5.23□□□□□ -3.25
USE1Q9NZ43 Y_RNA.520-201ENST00000384556 102 ntBASIC-5.23□□□□□ -3.25
USE1Q9NZ43 MIR545-201ENST00000385085 106 ntBASIC-5.23□□□□□ -3.25
USE1Q9NZ43 MIR4679-1-201ENST00000637619 75 ntBASIC-5.23□□□□□ -3.25
USE1Q9NZ43 MIR450A2-201ENST00000385022 100 ntBASIC-5.25□□□□□ -3.25
USE1Q9NZ43 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.26□□□□□ -3.25
USE1Q9NZ43 RNU6-539P-201ENST00000516665 103 ntBASIC-5.26□□□□□ -3.25
USE1Q9NZ43 AC110620.1-201ENST00000416042 228 ntBASIC-5.27□□□□□ -3.25
USE1Q9NZ43 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.27□□□□□ -3.25
USE1Q9NZ43 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.3□□□□□ -3.26
USE1Q9NZ43 RNY4P30-201ENST00000410216 95 ntBASIC-5.3□□□□□ -3.26
USE1Q9NZ43 AC099654.10-201ENST00000640395 161 ntBASIC-5.3□□□□□ -3.26
USE1Q9NZ43 RNA5SP89-201ENST00000410300 108 ntBASIC-5.31□□□□□ -3.26
USE1Q9NZ43 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.32□□□□□ -3.26
USE1Q9NZ43 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.35□□□□□ -3.27
USE1Q9NZ43 RNU4-33P-201ENST00000364316 85 ntBASIC-5.37□□□□□ -3.27
USE1Q9NZ43 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.39□□□□□ -3.27
USE1Q9NZ43 RNU6-919P-201ENST00000516731 104 ntBASIC-5.39□□□□□ -3.27
USE1Q9NZ43 RNU6-808P-201ENST00000391233 108 ntBASIC-5.4□□□□□ -3.27
USE1Q9NZ43 RNU6-446P-201ENST00000362827 106 ntBASIC-5.43□□□□□ -3.28
USE1Q9NZ43 RNU6-215P-201ENST00000365169 102 ntBASIC-5.43□□□□□ -3.28
USE1Q9NZ43 SNORD20-201ENST00000384550 80 ntBASIC-5.45□□□□□ -3.28
USE1Q9NZ43 AC114801.3-201ENST00000510231 177 ntBASIC-5.46□□□□□ -3.28
USE1Q9NZ43 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.46□□□□□ -3.28
USE1Q9NZ43 RNU6-294P-201ENST00000364999 102 ntBASIC-5.47□□□□□ -3.29
USE1Q9NZ43 RNU6-820P-201ENST00000384273 107 ntBASIC-5.48□□□□□ -3.29
USE1Q9NZ43 MIR4719-201ENST00000585233 84 ntBASIC-5.48□□□□□ -3.29
USE1Q9NZ43 MIR548M-201ENST00000408260 86 ntBASIC-5.5□□□□□ -3.29
USE1Q9NZ43 RNU6-406P-201ENST00000516470 107 ntBASIC-5.54□□□□□ -3.3
USE1Q9NZ43 SNORD113-4-201ENST00000364802 75 ntBASIC-5.59□□□□□ -3.3
USE1Q9NZ43 RNU6-44P-201ENST00000384045 107 ntBASIC-5.59□□□□□ -3.3
USE1Q9NZ43 MIR3910-1-201ENST00000580936 111 ntBASIC-5.59□□□□□ -3.3
USE1Q9NZ43 RNU4-85P-201ENST00000364675 123 ntBASIC-5.61□□□□□ -3.31
USE1Q9NZ43 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.63□□□□□ -3.31
USE1Q9NZ43 RNU6-59P-201ENST00000384787 107 ntBASIC-5.63□□□□□ -3.31
USE1Q9NZ43 MIR3202-2-201ENST00000635980 79 ntBASIC-5.64□□□□□ -3.31
USE1Q9NZ43 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.65□□□□□ -3.31
USE1Q9NZ43 RNU6-838P-201ENST00000363399 108 ntBASIC-5.66□□□□□ -3.32
USE1Q9NZ43 SNORD113-1-201ENST00000365321 69 ntBASIC-5.67□□□□□ -3.32
USE1Q9NZ43 RNU6-857P-201ENST00000515893 110 ntBASIC-5.68□□□□□ -3.32
USE1Q9NZ43 RNU6-153P-201ENST00000364422 104 ntBASIC-5.69□□□□□ -3.32
USE1Q9NZ43 RNU6-471P-201ENST00000383944 106 ntBASIC-5.69□□□□□ -3.32
USE1Q9NZ43 RNA5SP449-201ENST00000516871 130 ntBASIC-5.69□□□□□ -3.32
USE1Q9NZ43 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.71□□□□□ -3.32
USE1Q9NZ43 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.73□□□□□ -3.33
USE1Q9NZ43 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.73□□□□□ -3.33
USE1Q9NZ43 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.74□□□□□ -3.33
USE1Q9NZ43 RNU6-279P-201ENST00000391297 101 ntBASIC-5.76□□□□□ -3.33
USE1Q9NZ43 AL606753.1-201ENST00000427435 87 ntBASIC-5.77□□□□□ -3.33
USE1Q9NZ43 MIR3668-201ENST00000582138 75 ntBASIC-5.77□□□□□ -3.33
USE1Q9NZ43 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.8□□□□□ -3.34
USE1Q9NZ43 MIR1255A-201ENST00000408338 113 ntBASIC-5.8□□□□□ -3.34
USE1Q9NZ43 Y_RNA.369-201ENST00000365568 117 ntBASIC-5.81□□□□□ -3.34
USE1Q9NZ43 MIR5582-201ENST00000579697 68 ntBASIC-5.81□□□□□ -3.34
USE1Q9NZ43 RNU6-829P-201ENST00000363700 112 ntBASIC-5.82□□□□□ -3.34
USE1Q9NZ43 RNU6-986P-201ENST00000363133 102 ntBASIC-5.83□□□□□ -3.34
USE1Q9NZ43 RNY4P13-201ENST00000384284 96 ntBASIC-5.83□□□□□ -3.34
USE1Q9NZ43 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.86□□□□□ -3.35
USE1Q9NZ43 MT-TR-201ENST00000387439 65 ntBASIC-5.89□□□□□ -3.35
USE1Q9NZ43 RNU6-573P-201ENST00000383938 106 ntBASIC-5.92□□□□□ -3.36
USE1Q9NZ43 MIR633-201ENST00000384821 98 ntBASIC-5.92□□□□□ -3.36
USE1Q9NZ43 snosnR66.1-201ENST00000391095 99 ntBASIC-5.92□□□□□ -3.36
USE1Q9NZ43 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.94□□□□□ -3.36
USE1Q9NZ43 RNU6-627P-201ENST00000364032 102 ntBASIC-5.96□□□□□ -3.36
USE1Q9NZ43 SNORA26.2-201ENST00000390922 122 ntBASIC-5.98□□□□□ -3.37
USE1Q9NZ43 MIR363-201ENST00000384840 75 ntBASIC-6.05□□□□□ -3.38
USE1Q9NZ43 MIR3671-201ENST00000580455 88 ntBASIC-6.05□□□□□ -3.38
USE1Q9NZ43 MIR4662A-201ENST00000637499 67 ntBASIC-6.06□□□□□ -3.38
USE1Q9NZ43 RNU6-753P-201ENST00000363926 107 ntBASIC-6.08□□□□□ -3.38
USE1Q9NZ43 SNORD73B-201ENST00000364394 72 ntBASIC-6.08□□□□□ -3.38
USE1Q9NZ43 RNA5SP225-201ENST00000410874 135 ntBASIC-6.09□□□□□ -3.38
USE1Q9NZ43 RNU6-930P-201ENST00000390938 100 ntBASIC-6.14□□□□□ -3.39
USE1Q9NZ43 SNORD78.1-201ENST00000390866 65 ntBASIC-6.15□□□□□ -3.39
USE1Q9NZ43 MIR548F3-201ENST00000408509 87 ntBASIC-6.15□□□□□ -3.39
USE1Q9NZ43 RNY4P29-201ENST00000410801 97 ntBASIC-6.16□□□□□ -3.4
USE1Q9NZ43 AC079150.2-201ENST00000443733 78 ntBASIC-6.16□□□□□ -3.4
USE1Q9NZ43 RNU6-620P-201ENST00000384017 96 ntBASIC-6.2□□□□□ -3.4
USE1Q9NZ43 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.21□□□□□ -3.4
USE1Q9NZ43 RNU6-916P-201ENST00000516088 109 ntBASIC-6.26□□□□□ -3.41
USE1Q9NZ43 RNU6-936P-201ENST00000384005 107 ntBASIC-6.31□□□□□ -3.42
USE1Q9NZ43 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.39□□□□□ -3.43
USE1Q9NZ43 SNORD111B-201ENST00000408587 80 ntBASIC-6.39□□□□□ -3.43
USE1Q9NZ43 RNA5SP170-201ENST00000517150 101 ntBASIC-6.4□□□□□ -3.43
USE1Q9NZ43 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.48□□□□□ -3.45
USE1Q9NZ43 RNU6-499P-201ENST00000365615 107 ntBASIC-6.48□□□□□ -3.45
USE1Q9NZ43 AC125388.1-201ENST00000459631 156 ntBASIC-6.5□□□□□ -3.45
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms