Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.29□□□□□ -2.94
ECHDC3Q96DC8 MIR3938-201ENST00000582157 103 ntBASIC-3.29□□□□□ -2.94
ECHDC3Q96DC8 AC062037.1-201ENST00000605302 128 ntBASIC-3.29□□□□□ -2.94
ECHDC3Q96DC8 AL603908.1-201ENST00000406098 201 ntBASIC-3.3□□□□□ -2.94
ECHDC3Q96DC8 RNU6-871P-201ENST00000516122 100 ntBASIC-3.3□□□□□ -2.94
ECHDC3Q96DC8 RNU6-406P-201ENST00000516470 107 ntBASIC-3.31□□□□□ -2.94
ECHDC3Q96DC8 U6.111-201ENST00000636093 83 ntBASIC-3.31□□□□□ -2.94
ECHDC3Q96DC8 MIR1254-1-201ENST00000408257 97 ntBASIC-3.33□□□□□ -2.94
ECHDC3Q96DC8 RNU6-539P-201ENST00000516665 103 ntBASIC-3.33□□□□□ -2.94
ECHDC3Q96DC8 MIR5582-201ENST00000579697 68 ntBASIC-3.33□□□□□ -2.94
ECHDC3Q96DC8 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.34□□□□□ -2.94
ECHDC3Q96DC8 RNU6-737P-201ENST00000365370 107 ntBASIC-3.36□□□□□ -2.95
ECHDC3Q96DC8 MIR3202-2-201ENST00000635980 79 ntBASIC-3.37□□□□□ -2.95
ECHDC3Q96DC8 RNU6-742P-201ENST00000365289 107 ntBASIC-3.38□□□□□ -2.95
ECHDC3Q96DC8 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.4□□□□□ -2.95
ECHDC3Q96DC8 MIR4679-1-201ENST00000637619 75 ntBASIC-3.42□□□□□ -2.96
ECHDC3Q96DC8 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.43□□□□□ -2.96
ECHDC3Q96DC8 RNU6-857P-201ENST00000515893 110 ntBASIC-3.44□□□□□ -2.96
ECHDC3Q96DC8 RNU6-279P-201ENST00000391297 101 ntBASIC-3.45□□□□□ -2.96
ECHDC3Q96DC8 AC110620.1-201ENST00000416042 228 ntBASIC-3.45□□□□□ -2.96
ECHDC3Q96DC8 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.46□□□□□ -2.96
ECHDC3Q96DC8 MIR548AH-201ENST00000637109 76 ntBASIC-3.47□□□□□ -2.96
ECHDC3Q96DC8 MIR124-1-201ENST00000385275 85 ntBASIC-3.48□□□□□ -2.97
ECHDC3Q96DC8 RNU6-345P-201ENST00000517001 107 ntBASIC-3.5□□□□□ -2.97
ECHDC3Q96DC8 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.5□□□□□ -2.97
ECHDC3Q96DC8 MIR1255A-201ENST00000408338 113 ntBASIC-3.51□□□□□ -2.97
ECHDC3Q96DC8 MIR548X-201ENST00000580069 75 ntBASIC-3.51□□□□□ -2.97
ECHDC3Q96DC8 RNU6-854P-201ENST00000364036 107 ntBASIC-3.54□□□□□ -2.98
ECHDC3Q96DC8 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.55□□□□□ -2.98
ECHDC3Q96DC8 SNORD73B-201ENST00000364394 72 ntBASIC-3.57□□□□□ -2.98
ECHDC3Q96DC8 RNU6-573P-201ENST00000383938 106 ntBASIC-3.57□□□□□ -2.98
ECHDC3Q96DC8 RNY4P29-201ENST00000410801 97 ntBASIC-3.63□□□□□ -2.99
ECHDC3Q96DC8 U2.22-201ENST00000636441 106 ntBASIC-3.63□□□□□ -2.99
ECHDC3Q96DC8 RNU6-822P-201ENST00000362707 106 ntBASIC-3.64□□□□□ -2.99
ECHDC3Q96DC8 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.64□□□□□ -2.99
ECHDC3Q96DC8 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.64□□□□□ -2.99
ECHDC3Q96DC8 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.66□□□□□ -3
ECHDC3Q96DC8 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.66□□□□□ -3
ECHDC3Q96DC8 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.66□□□□□ -3
ECHDC3Q96DC8 RNU6-471P-201ENST00000383944 106 ntBASIC-3.67□□□□□ -3
ECHDC3Q96DC8 SNORA26.2-201ENST00000390922 122 ntBASIC-3.67□□□□□ -3
ECHDC3Q96DC8 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.69□□□□□ -3
ECHDC3Q96DC8 RNU6-446P-201ENST00000362827 106 ntBASIC-3.7□□□□□ -3
ECHDC3Q96DC8 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.7□□□□□ -3
ECHDC3Q96DC8 SNORD78.1-201ENST00000390866 65 ntBASIC-3.7□□□□□ -3
ECHDC3Q96DC8 RNA5SP170-201ENST00000517150 101 ntBASIC-3.7□□□□□ -3
ECHDC3Q96DC8 MIR363-201ENST00000384840 75 ntBASIC-3.71□□□□□ -3
ECHDC3Q96DC8 RNA5SP225-201ENST00000410874 135 ntBASIC-3.74□□□□□ -3.01
ECHDC3Q96DC8 AC139453.2-201ENST00000487255 133 ntBASIC-3.74□□□□□ -3.01
ECHDC3Q96DC8 RNA5SP449-201ENST00000516871 130 ntBASIC-3.74□□□□□ -3.01
ECHDC3Q96DC8 MIR4317-201ENST00000637586 65 ntBASIC-3.74□□□□□ -3.01
ECHDC3Q96DC8 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.75□□□□□ -3.01
ECHDC3Q96DC8 RNU6-776P-201ENST00000364403 104 ntBASIC-3.75□□□□□ -3.01
ECHDC3Q96DC8 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.75□□□□□ -3.01
ECHDC3Q96DC8 MIR4662A-201ENST00000637499 67 ntBASIC-3.75□□□□□ -3.01
ECHDC3Q96DC8 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.79□□□□□ -3.02
ECHDC3Q96DC8 MIR548H4-201ENST00000408689 111 ntBASIC-3.82□□□□□ -3.02
ECHDC3Q96DC8 AC114801.3-201ENST00000510231 177 ntBASIC-3.82□□□□□ -3.02
ECHDC3Q96DC8 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.84□□□□□ -3.02
ECHDC3Q96DC8 RNA5SP224-201ENST00000365069 126 ntBASIC-3.85□□□□□ -3.03
ECHDC3Q96DC8 MIR548AL-201ENST00000578416 97 ntBASIC-3.86□□□□□ -3.03
ECHDC3Q96DC8 RNU4-33P-201ENST00000364316 85 ntBASIC-3.87□□□□□ -3.03
ECHDC3Q96DC8 SNORD113-4-201ENST00000364802 75 ntBASIC-3.87□□□□□ -3.03
ECHDC3Q96DC8 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.88□□□□□ -3.03
ECHDC3Q96DC8 MIR656-201ENST00000385224 78 ntBASIC-3.88□□□□□ -3.03
ECHDC3Q96DC8 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.89□□□□□ -3.03
ECHDC3Q96DC8 RNU4-85P-201ENST00000364675 123 ntBASIC-3.89□□□□□ -3.03
ECHDC3Q96DC8 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.9□□□□□ -3.03
ECHDC3Q96DC8 MIR1302-4-201ENST00000408701 150 ntBASIC-3.92□□□□□ -3.04
ECHDC3Q96DC8 RNU6-788P-201ENST00000390967 104 ntBASIC-3.94□□□□□ -3.04
ECHDC3Q96DC8 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.95□□□□□ -3.04
ECHDC3Q96DC8 RNU6-836P-201ENST00000362920 107 ntBASIC-3.97□□□□□ -3.04
ECHDC3Q96DC8 SNORD45C-201ENST00000383893 79 ntBASIC-3.97□□□□□ -3.04
ECHDC3Q96DC8 RNU6-829P-201ENST00000363700 112 ntBASIC-3.98□□□□□ -3.05
ECHDC3Q96DC8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.99□□□□□ -3.05
ECHDC3Q96DC8 Y_RNA.685-201ENST00000516532 108 ntBASIC-4□□□□□ -3.05
ECHDC3Q96DC8 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.01□□□□□ -3.05
ECHDC3Q96DC8 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.02□□□□□ -3.05
ECHDC3Q96DC8 SNORD115.2-201ENST00000391126 59 ntBASIC-4.02□□□□□ -3.05
ECHDC3Q96DC8 RNU6-916P-201ENST00000516088 109 ntBASIC-4.04□□□□□ -3.06
ECHDC3Q96DC8 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.06□□□□□ -3.06
ECHDC3Q96DC8 MIR633-201ENST00000384821 98 ntBASIC-4.06□□□□□ -3.06
ECHDC3Q96DC8 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.07□□□□□ -3.06
ECHDC3Q96DC8 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.08□□□□□ -3.06
ECHDC3Q96DC8 RNU6-808P-201ENST00000391233 108 ntBASIC-4.08□□□□□ -3.06
ECHDC3Q96DC8 RNU6-422P-201ENST00000384632 107 ntBASIC-4.11□□□□□ -3.07
ECHDC3Q96DC8 RNU6-838P-201ENST00000363399 108 ntBASIC-4.14□□□□□ -3.07
ECHDC3Q96DC8 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.16□□□□□ -3.08
ECHDC3Q96DC8 AC079150.2-201ENST00000443733 78 ntBASIC-4.19□□□□□ -3.08
ECHDC3Q96DC8 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.2□□□□□ -3.08
ECHDC3Q96DC8 MIR545-201ENST00000385085 106 ntBASIC-4.22□□□□□ -3.08
ECHDC3Q96DC8 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.22□□□□□ -3.08
ECHDC3Q96DC8 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.24□□□□□ -3.09
ECHDC3Q96DC8 RNU6-59P-201ENST00000384787 107 ntBASIC-4.29□□□□□ -3.1
ECHDC3Q96DC8 AC125388.1-201ENST00000459631 156 ntBASIC-4.3□□□□□ -3.1
ECHDC3Q96DC8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.34□□□□□ -3.1
ECHDC3Q96DC8 RNU6-986P-201ENST00000363133 102 ntBASIC-4.39□□□□□ -3.11
ECHDC3Q96DC8 RNU6-753P-201ENST00000363926 107 ntBASIC-4.41□□□□□ -3.12
ECHDC3Q96DC8 RNU6-499P-201ENST00000365615 107 ntBASIC-4.41□□□□□ -3.12
ECHDC3Q96DC8 MIR548F3-201ENST00000408509 87 ntBASIC-4.48□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms