Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-919P-201ENST00000516731 104 ntBASIC-3.63□□□□□ -2.99
HLA-DMBP28068 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.63□□□□□ -2.99
HLA-DMBP28068 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.64□□□□□ -2.99
HLA-DMBP28068 RNU6-215P-201ENST00000365169 102 ntBASIC-3.64□□□□□ -2.99
HLA-DMBP28068 RNU6-871P-201ENST00000516122 100 ntBASIC-3.64□□□□□ -2.99
HLA-DMBP28068 U6.111-201ENST00000636093 83 ntBASIC-3.64□□□□□ -2.99
HLA-DMBP28068 MIR548X-201ENST00000580069 75 ntBASIC-3.65□□□□□ -2.99
HLA-DMBP28068 RNU6-539P-201ENST00000516665 103 ntBASIC-3.66□□□□□ -3
HLA-DMBP28068 MIR4317-201ENST00000637586 65 ntBASIC-3.67□□□□□ -3
HLA-DMBP28068 SNORD113-1-201ENST00000365321 69 ntBASIC-3.68□□□□□ -3
HLA-DMBP28068 MIR548M-201ENST00000408260 86 ntBASIC-3.68□□□□□ -3
HLA-DMBP28068 MIR4679-1-201ENST00000637619 75 ntBASIC-3.68□□□□□ -3
HLA-DMBP28068 RNU6-836P-201ENST00000362920 107 ntBASIC-3.69□□□□□ -3
HLA-DMBP28068 SNORD20-201ENST00000384550 80 ntBASIC-3.7□□□□□ -3
HLA-DMBP28068 MIR124-1-201ENST00000385275 85 ntBASIC-3.7□□□□□ -3
HLA-DMBP28068 SNORD115.2-201ENST00000391126 59 ntBASIC-3.7□□□□□ -3
HLA-DMBP28068 RNY4P30-201ENST00000410216 95 ntBASIC-3.7□□□□□ -3
HLA-DMBP28068 MIR3910-1-201ENST00000580936 111 ntBASIC-3.72□□□□□ -3
HLA-DMBP28068 RNU6-820P-201ENST00000384273 107 ntBASIC-3.73□□□□□ -3.01
HLA-DMBP28068 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.74□□□□□ -3.01
HLA-DMBP28068 AC110620.1-201ENST00000416042 228 ntBASIC-3.74□□□□□ -3.01
HLA-DMBP28068 MIR548AH-201ENST00000637109 76 ntBASIC-3.75□□□□□ -3.01
HLA-DMBP28068 RNU6-294P-201ENST00000364999 102 ntBASIC-3.76□□□□□ -3.01
HLA-DMBP28068 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.79□□□□□ -3.02
HLA-DMBP28068 MIR548H4-201ENST00000408689 111 ntBASIC-3.81□□□□□ -3.02
HLA-DMBP28068 RNU6-406P-201ENST00000516470 107 ntBASIC-3.81□□□□□ -3.02
HLA-DMBP28068 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.81□□□□□ -3.02
HLA-DMBP28068 RNU6-153P-201ENST00000364422 104 ntBASIC-3.82□□□□□ -3.02
HLA-DMBP28068 RNU6-44P-201ENST00000384045 107 ntBASIC-3.82□□□□□ -3.02
HLA-DMBP28068 RNU6-788P-201ENST00000390967 104 ntBASIC-3.83□□□□□ -3.02
HLA-DMBP28068 MIR3668-201ENST00000582138 75 ntBASIC-3.83□□□□□ -3.02
HLA-DMBP28068 snosnR66.1-201ENST00000391095 99 ntBASIC-3.84□□□□□ -3.02
HLA-DMBP28068 RNU6-776P-201ENST00000364403 104 ntBASIC-3.85□□□□□ -3.03
HLA-DMBP28068 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.85□□□□□ -3.03
HLA-DMBP28068 MIR3202-2-201ENST00000635980 79 ntBASIC-3.87□□□□□ -3.03
HLA-DMBP28068 RNU6-665P-201ENST00000384639 107 ntBASIC-3.88□□□□□ -3.03
HLA-DMBP28068 RNU6-422P-201ENST00000384632 107 ntBASIC-3.91□□□□□ -3.04
HLA-DMBP28068 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.91□□□□□ -3.04
HLA-DMBP28068 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.92□□□□□ -3.04
HLA-DMBP28068 AL606753.1-201ENST00000427435 87 ntBASIC-3.92□□□□□ -3.04
HLA-DMBP28068 RNU6-857P-201ENST00000515893 110 ntBASIC-3.92□□□□□ -3.04
HLA-DMBP28068 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.93□□□□□ -3.04
HLA-DMBP28068 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.93□□□□□ -3.04
HLA-DMBP28068 MIR548AL-201ENST00000578416 97 ntBASIC-3.93□□□□□ -3.04
HLA-DMBP28068 MT-TR-201ENST00000387439 65 ntBASIC-3.94□□□□□ -3.04
HLA-DMBP28068 RNU6-279P-201ENST00000391297 101 ntBASIC-3.94□□□□□ -3.04
HLA-DMBP28068 RNU6-446P-201ENST00000362827 106 ntBASIC-3.95□□□□□ -3.04
HLA-DMBP28068 MIR545-201ENST00000385085 106 ntBASIC-3.95□□□□□ -3.04
HLA-DMBP28068 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.97□□□□□ -3.04
HLA-DMBP28068 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.97□□□□□ -3.04
HLA-DMBP28068 MIR3671-201ENST00000580455 88 ntBASIC-3.97□□□□□ -3.04
HLA-DMBP28068 MIR5582-201ENST00000579697 68 ntBASIC-3.98□□□□□ -3.05
HLA-DMBP28068 AC114801.3-201ENST00000510231 177 ntBASIC-3.99□□□□□ -3.05
HLA-DMBP28068 RNU6-471P-201ENST00000383944 106 ntBASIC-4□□□□□ -3.05
HLA-DMBP28068 RNU4-33P-201ENST00000364316 85 ntBASIC-4.01□□□□□ -3.05
HLA-DMBP28068 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.01□□□□□ -3.05
HLA-DMBP28068 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.02□□□□□ -3.05
HLA-DMBP28068 MIR1255A-201ENST00000408338 113 ntBASIC-4.03□□□□□ -3.05
HLA-DMBP28068 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.04□□□□□ -3.06
HLA-DMBP28068 RNU6-808P-201ENST00000391233 108 ntBASIC-4.05□□□□□ -3.06
HLA-DMBP28068 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.07□□□□□ -3.06
HLA-DMBP28068 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.07□□□□□ -3.06
HLA-DMBP28068 SNORD113-4-201ENST00000364802 75 ntBASIC-4.1□□□□□ -3.07
HLA-DMBP28068 RNU6-573P-201ENST00000383938 106 ntBASIC-4.13□□□□□ -3.07
HLA-DMBP28068 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.16□□□□□ -3.08
HLA-DMBP28068 SNORD73B-201ENST00000364394 72 ntBASIC-4.2□□□□□ -3.08
HLA-DMBP28068 MIR4662A-201ENST00000637499 67 ntBASIC-4.2□□□□□ -3.08
HLA-DMBP28068 SNORA26.2-201ENST00000390922 122 ntBASIC-4.21□□□□□ -3.08
HLA-DMBP28068 RNU6-829P-201ENST00000363700 112 ntBASIC-4.23□□□□□ -3.09
HLA-DMBP28068 SNORD78.1-201ENST00000390866 65 ntBASIC-4.24□□□□□ -3.09
HLA-DMBP28068 RNY4P29-201ENST00000410801 97 ntBASIC-4.24□□□□□ -3.09
HLA-DMBP28068 RNU6-838P-201ENST00000363399 108 ntBASIC-4.25□□□□□ -3.09
HLA-DMBP28068 RNU6-59P-201ENST00000384787 107 ntBASIC-4.25□□□□□ -3.09
HLA-DMBP28068 RNA5SP225-201ENST00000410874 135 ntBASIC-4.26□□□□□ -3.09
HLA-DMBP28068 RNU4-85P-201ENST00000364675 123 ntBASIC-4.27□□□□□ -3.09
HLA-DMBP28068 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.27□□□□□ -3.09
HLA-DMBP28068 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.28□□□□□ -3.09
HLA-DMBP28068 Y_RNA.388-201ENST00000383919 113 ntBASIC-4.28□□□□□ -3.09
HLA-DMBP28068 RNY4P13-201ENST00000384284 96 ntBASIC-4.31□□□□□ -3.1
HLA-DMBP28068 MIR633-201ENST00000384821 98 ntBASIC-4.31□□□□□ -3.1
HLA-DMBP28068 RNA5SP449-201ENST00000516871 130 ntBASIC-4.32□□□□□ -3.1
HLA-DMBP28068 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.34□□□□□ -3.1
HLA-DMBP28068 RNU6-986P-201ENST00000363133 102 ntBASIC-4.36□□□□□ -3.11
HLA-DMBP28068 AL603908.1-201ENST00000406098 201 ntBASIC-4.36□□□□□ -3.11
HLA-DMBP28068 RNA5SP170-201ENST00000517150 101 ntBASIC-4.39□□□□□ -3.11
HLA-DMBP28068 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.43□□□□□ -3.12
HLA-DMBP28068 AC079150.2-201ENST00000443733 78 ntBASIC-4.45□□□□□ -3.12
HLA-DMBP28068 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.48□□□□□ -3.13
HLA-DMBP28068 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.49□□□□□ -3.13
HLA-DMBP28068 RNU6-627P-201ENST00000364032 102 ntBASIC-4.54□□□□□ -3.14
HLA-DMBP28068 RNU6-753P-201ENST00000363926 107 ntBASIC-4.55□□□□□ -3.14
HLA-DMBP28068 MIR1302-4-201ENST00000408701 150 ntBASIC-4.56□□□□□ -3.14
HLA-DMBP28068 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.57□□□□□ -3.14
HLA-DMBP28068 RNU6-930P-201ENST00000390938 100 ntBASIC-4.61□□□□□ -3.15
HLA-DMBP28068 MIR548F3-201ENST00000408509 87 ntBASIC-4.61□□□□□ -3.15
HLA-DMBP28068 AC125388.1-201ENST00000459631 156 ntBASIC-4.62□□□□□ -3.15
HLA-DMBP28068 U2.22-201ENST00000636441 106 ntBASIC-4.62□□□□□ -3.15
HLA-DMBP28068 MIR363-201ENST00000384840 75 ntBASIC-4.64□□□□□ -3.15
HLA-DMBP28068 RNU6-936P-201ENST00000384005 107 ntBASIC-4.68□□□□□ -3.16
HLA-DMBP28068 RNU6-499P-201ENST00000365615 107 ntBASIC-4.69□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms