Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MIR4317-201ENST00000637586 65 ntBASIC-4.05□□□□□ -3.06
HMGB1P09429 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.06□□□□□ -3.06
HMGB1P09429 RNU6-871P-201ENST00000516122 100 ntBASIC-4.06□□□□□ -3.06
HMGB1P09429 MIR548X-201ENST00000580069 75 ntBASIC-4.06□□□□□ -3.06
HMGB1P09429 U6.111-201ENST00000636093 83 ntBASIC-4.07□□□□□ -3.06
HMGB1P09429 RNU6-737P-201ENST00000365370 107 ntBASIC-4.08□□□□□ -3.06
HMGB1P09429 MIR656-201ENST00000385224 78 ntBASIC-4.09□□□□□ -3.06
HMGB1P09429 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.09□□□□□ -3.06
HMGB1P09429 MIR4679-1-201ENST00000637619 75 ntBASIC-4.09□□□□□ -3.06
HMGB1P09429 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.1□□□□□ -3.07
HMGB1P09429 RNU6-539P-201ENST00000516665 103 ntBASIC-4.1□□□□□ -3.07
HMGB1P09429 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.11□□□□□ -3.07
HMGB1P09429 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.12□□□□□ -3.07
HMGB1P09429 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.12□□□□□ -3.07
HMGB1P09429 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.12□□□□□ -3.07
HMGB1P09429 RNA5SP224-201ENST00000365069 126 ntBASIC-4.14□□□□□ -3.07
HMGB1P09429 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.16□□□□□ -3.08
HMGB1P09429 SNORD115.2-201ENST00000391126 59 ntBASIC-4.16□□□□□ -3.08
HMGB1P09429 SNORD45C-201ENST00000383893 79 ntBASIC-4.17□□□□□ -3.08
HMGB1P09429 Y_RNA.81-201ENST00000362997 102 ntBASIC-4.19□□□□□ -3.08
HMGB1P09429 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.19□□□□□ -3.08
HMGB1P09429 SNORD114-13-201ENST00000364377 74 ntBASIC-4.19□□□□□ -3.08
HMGB1P09429 AC110620.1-201ENST00000416042 228 ntBASIC-4.19□□□□□ -3.08
HMGB1P09429 RNU6-836P-201ENST00000362920 107 ntBASIC-4.21□□□□□ -3.08
HMGB1P09429 RNU6-987P-201ENST00000384759 104 ntBASIC-4.21□□□□□ -3.08
HMGB1P09429 MIR3202-2-201ENST00000635980 79 ntBASIC-4.23□□□□□ -3.09
HMGB1P09429 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.24□□□□□ -3.09
HMGB1P09429 RNU6-854P-201ENST00000364036 107 ntBASIC-4.25□□□□□ -3.09
HMGB1P09429 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.27□□□□□ -3.09
HMGB1P09429 MIR509-1-201ENST00000385265 94 ntBASIC-4.29□□□□□ -3.1
HMGB1P09429 MIR509-2-201ENST00000390724 91 ntBASIC-4.29□□□□□ -3.1
HMGB1P09429 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.3□□□□□ -3.1
HMGB1P09429 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.3□□□□□ -3.1
HMGB1P09429 MIR548H4-201ENST00000408689 111 ntBASIC-4.31□□□□□ -3.1
HMGB1P09429 RNU6-776P-201ENST00000364403 104 ntBASIC-4.33□□□□□ -3.1
HMGB1P09429 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.33□□□□□ -3.1
HMGB1P09429 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.33□□□□□ -3.1
HMGB1P09429 MIR548AL-201ENST00000578416 97 ntBASIC-4.34□□□□□ -3.1
HMGB1P09429 RNA5SP106-201ENST00000517274 100 ntBASIC-4.35□□□□□ -3.11
HMGB1P09429 SNORD73B-201ENST00000364394 72 ntBASIC-4.36□□□□□ -3.11
HMGB1P09429 RNA5SP170-201ENST00000517150 101 ntBASIC-4.36□□□□□ -3.11
HMGB1P09429 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.38□□□□□ -3.11
HMGB1P09429 RNU6-573P-201ENST00000383938 106 ntBASIC-4.39□□□□□ -3.11
HMGB1P09429 RNU6-446P-201ENST00000362827 106 ntBASIC-4.4□□□□□ -3.11
HMGB1P09429 SNORD115-45-201ENST00000391078 81 ntBASIC-4.4□□□□□ -3.11
HMGB1P09429 RNU6-857P-201ENST00000515893 110 ntBASIC-4.4□□□□□ -3.11
HMGB1P09429 AC114801.3-201ENST00000510231 177 ntBASIC-4.41□□□□□ -3.12
HMGB1P09429 RNU4-33P-201ENST00000364316 85 ntBASIC-4.42□□□□□ -3.12
HMGB1P09429 MIR1255A-201ENST00000408338 113 ntBASIC-4.42□□□□□ -3.12
HMGB1P09429 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.42□□□□□ -3.12
HMGB1P09429 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.42□□□□□ -3.12
HMGB1P09429 MIR124-1-201ENST00000385275 85 ntBASIC-4.43□□□□□ -3.12
HMGB1P09429 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.44□□□□□ -3.12
HMGB1P09429 SNORA26.2-201ENST00000390922 122 ntBASIC-4.44□□□□□ -3.12
HMGB1P09429 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.46□□□□□ -3.12
HMGB1P09429 RNY4P10-201ENST00000365571 96 ntBASIC-4.47□□□□□ -3.13
HMGB1P09429 RNU6-279P-201ENST00000391297 101 ntBASIC-4.47□□□□□ -3.13
HMGB1P09429 RNU6-471P-201ENST00000383944 106 ntBASIC-4.49□□□□□ -3.13
HMGB1P09429 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.5□□□□□ -3.13
HMGB1P09429 RNY4P29-201ENST00000410801 97 ntBASIC-4.5□□□□□ -3.13
HMGB1P09429 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.52□□□□□ -3.13
HMGB1P09429 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.53□□□□□ -3.13
HMGB1P09429 RNU6-788P-201ENST00000390967 104 ntBASIC-4.53□□□□□ -3.13
HMGB1P09429 RNU6-808P-201ENST00000391233 108 ntBASIC-4.53□□□□□ -3.13
HMGB1P09429 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.54□□□□□ -3.14
HMGB1P09429 SNORD113-4-201ENST00000364802 75 ntBASIC-4.55□□□□□ -3.14
HMGB1P09429 RNU6-422P-201ENST00000384632 107 ntBASIC-4.55□□□□□ -3.14
HMGB1P09429 MIR548AH-201ENST00000637109 76 ntBASIC-4.56□□□□□ -3.14
HMGB1P09429 Y_RNA.388-201ENST00000383919 113 ntBASIC-4.59□□□□□ -3.14
HMGB1P09429 MIR545-201ENST00000385085 106 ntBASIC-4.6□□□□□ -3.15
HMGB1P09429 RNU6-838P-201ENST00000363399 108 ntBASIC-4.7□□□□□ -3.16
HMGB1P09429 RNU6-829P-201ENST00000363700 112 ntBASIC-4.7□□□□□ -3.16
HMGB1P09429 SNORD78.1-201ENST00000390866 65 ntBASIC-4.7□□□□□ -3.16
HMGB1P09429 MIR4662A-201ENST00000637499 67 ntBASIC-4.71□□□□□ -3.16
HMGB1P09429 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.73□□□□□ -3.17
HMGB1P09429 RNA5SP225-201ENST00000410874 135 ntBASIC-4.73□□□□□ -3.17
HMGB1P09429 MIR633-201ENST00000384821 98 ntBASIC-4.75□□□□□ -3.17
HMGB1P09429 RNU6-59P-201ENST00000384787 107 ntBASIC-4.77□□□□□ -3.17
HMGB1P09429 RNU6-665P-201ENST00000384639 107 ntBASIC-4.81□□□□□ -3.18
HMGB1P09429 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.81□□□□□ -3.18
HMGB1P09429 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.87□□□□□ -3.19
HMGB1P09429 RNU6-986P-201ENST00000363133 102 ntBASIC-4.88□□□□□ -3.19
HMGB1P09429 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.91□□□□□ -3.2
HMGB1P09429 AC079150.2-201ENST00000443733 78 ntBASIC-4.96□□□□□ -3.2
HMGB1P09429 MIR1302-4-201ENST00000408701 150 ntBASIC-4.97□□□□□ -3.21
HMGB1P09429 RNU6-753P-201ENST00000363926 107 ntBASIC-5□□□□□ -3.21
HMGB1P09429 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5□□□□□ -3.21
HMGB1P09429 RNU6-930P-201ENST00000390938 100 ntBASIC-5.08□□□□□ -3.22
HMGB1P09429 AC125388.1-201ENST00000459631 156 ntBASIC-5.11□□□□□ -3.23
HMGB1P09429 MIR548F3-201ENST00000408509 87 ntBASIC-5.12□□□□□ -3.23
HMGB1P09429 RNU6-936P-201ENST00000384005 107 ntBASIC-5.13□□□□□ -3.23
HMGB1P09429 RNU4-85P-201ENST00000364675 123 ntBASIC-5.16□□□□□ -3.24
HMGB1P09429 Y_RNA.685-201ENST00000516532 108 ntBASIC-5.18□□□□□ -3.24
HMGB1P09429 RNU6-499P-201ENST00000365615 107 ntBASIC-5.21□□□□□ -3.24
HMGB1P09429 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-5.24□□□□□ -3.25
HMGB1P09429 RNA5SP449-201ENST00000516871 130 ntBASIC-5.26□□□□□ -3.25
HMGB1P09429 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.28□□□□□ -3.25
HMGB1P09429 RNU6-627P-201ENST00000364032 102 ntBASIC-5.3□□□□□ -3.26
HMGB1P09429 RNU6-1275P-201ENST00000391087 107 ntBASIC-5.34□□□□□ -3.26
HMGB1P09429 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.38□□□□□ -3.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms