Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-1161P-201ENST00000516176 102 ntBASIC-3□□□□□ -2.89
TRAV1-1A0A0B4J248 MIR124-1-201ENST00000385275 85 ntBASIC-3.01□□□□□ -2.89
TRAV1-1A0A0B4J248 AC099654.10-201ENST00000640395 161 ntBASIC-3.01□□□□□ -2.89
TRAV1-1A0A0B4J248 AC110620.1-201ENST00000416042 228 ntBASIC-3.02□□□□□ -2.89
TRAV1-1A0A0B4J248 RNU6-539P-201ENST00000516665 103 ntBASIC-3.02□□□□□ -2.89
TRAV1-1A0A0B4J248 RNU6-871P-201ENST00000516122 100 ntBASIC-3.03□□□□□ -2.89
TRAV1-1A0A0B4J248 RNU6-794P-201ENST00000517261 64 ntBASIC-3.04□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-446P-201ENST00000362827 106 ntBASIC-3.06□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.06□□□□□ -2.9
TRAV1-1A0A0B4J248 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.06□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-215P-201ENST00000365169 102 ntBASIC-3.07□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.07□□□□□ -2.9
TRAV1-1A0A0B4J248 SNORD20-201ENST00000384550 80 ntBASIC-3.07□□□□□ -2.9
TRAV1-1A0A0B4J248 MIR548AH-201ENST00000637109 76 ntBASIC-3.07□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-776P-201ENST00000364403 104 ntBASIC-3.08□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.08□□□□□ -2.9
TRAV1-1A0A0B4J248 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.08□□□□□ -2.9
TRAV1-1A0A0B4J248 RNU6-788P-201ENST00000390967 104 ntBASIC-3.08□□□□□ -2.9
TRAV1-1A0A0B4J248 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.1□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-294P-201ENST00000364999 102 ntBASIC-3.1□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-919P-201ENST00000516731 104 ntBASIC-3.1□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.11□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-406P-201ENST00000516470 107 ntBASIC-3.11□□□□□ -2.91
TRAV1-1A0A0B4J248 RNA5SP106-201ENST00000517274 100 ntBASIC-3.11□□□□□ -2.91
TRAV1-1A0A0B4J248 MIR548AL-201ENST00000578416 97 ntBASIC-3.11□□□□□ -2.91
TRAV1-1A0A0B4J248 MIR4679-1-201ENST00000637619 75 ntBASIC-3.11□□□□□ -2.91
TRAV1-1A0A0B4J248 RNY4P10-201ENST00000365571 96 ntBASIC-3.12□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-44P-201ENST00000384045 107 ntBASIC-3.12□□□□□ -2.91
TRAV1-1A0A0B4J248 SNORD113-4-201ENST00000364802 75 ntBASIC-3.14□□□□□ -2.91
TRAV1-1A0A0B4J248 MIR545-201ENST00000385085 106 ntBASIC-3.14□□□□□ -2.91
TRAV1-1A0A0B4J248 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.15□□□□□ -2.91
TRAV1-1A0A0B4J248 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.15□□□□□ -2.91
TRAV1-1A0A0B4J248 RNU6-820P-201ENST00000384273 107 ntBASIC-3.16□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU4-33P-201ENST00000364316 85 ntBASIC-3.17□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU6-857P-201ENST00000515893 110 ntBASIC-3.17□□□□□ -2.92
TRAV1-1A0A0B4J248 MIR3910-1-201ENST00000580936 111 ntBASIC-3.18□□□□□ -2.92
TRAV1-1A0A0B4J248 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.19□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU6-153P-201ENST00000364422 104 ntBASIC-3.2□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU6-987P-201ENST00000384759 104 ntBASIC-3.2□□□□□ -2.92
TRAV1-1A0A0B4J248 MIR548M-201ENST00000408260 86 ntBASIC-3.2□□□□□ -2.92
TRAV1-1A0A0B4J248 AC114801.3-201ENST00000510231 177 ntBASIC-3.2□□□□□ -2.92
TRAV1-1A0A0B4J248 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.2□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU6-422P-201ENST00000384632 107 ntBASIC-3.22□□□□□ -2.92
TRAV1-1A0A0B4J248 MIR1255A-201ENST00000408338 113 ntBASIC-3.22□□□□□ -2.92
TRAV1-1A0A0B4J248 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.23□□□□□ -2.93
TRAV1-1A0A0B4J248 SNORD113-1-201ENST00000365321 69 ntBASIC-3.23□□□□□ -2.93
TRAV1-1A0A0B4J248 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.23□□□□□ -2.93
TRAV1-1A0A0B4J248 RNU6-808P-201ENST00000391233 108 ntBASIC-3.23□□□□□ -2.93
TRAV1-1A0A0B4J248 MIR3202-2-201ENST00000635980 79 ntBASIC-3.24□□□□□ -2.93
TRAV1-1A0A0B4J248 MIR5582-201ENST00000579697 68 ntBASIC-3.25□□□□□ -2.93
TRAV1-1A0A0B4J248 RNU6-279P-201ENST00000391297 101 ntBASIC-3.26□□□□□ -2.93
TRAV1-1A0A0B4J248 RNU6-573P-201ENST00000383938 106 ntBASIC-3.27□□□□□ -2.93
TRAV1-1A0A0B4J248 RNU6-471P-201ENST00000383944 106 ntBASIC-3.27□□□□□ -2.93
TRAV1-1A0A0B4J248 MT-TR-201ENST00000387439 65 ntBASIC-3.27□□□□□ -2.93
TRAV1-1A0A0B4J248 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.27□□□□□ -2.93
TRAV1-1A0A0B4J248 AL606753.1-201ENST00000427435 87 ntBASIC-3.3□□□□□ -2.94
TRAV1-1A0A0B4J248 RNU6-829P-201ENST00000363700 112 ntBASIC-3.31□□□□□ -2.94
TRAV1-1A0A0B4J248 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.31□□□□□ -2.94
TRAV1-1A0A0B4J248 MIR4719-201ENST00000585233 84 ntBASIC-3.31□□□□□ -2.94
TRAV1-1A0A0B4J248 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.32□□□□□ -2.94
TRAV1-1A0A0B4J248 RNU6-665P-201ENST00000384639 107 ntBASIC-3.32□□□□□ -2.94
TRAV1-1A0A0B4J248 MIR633-201ENST00000384821 98 ntBASIC-3.33□□□□□ -2.94
TRAV1-1A0A0B4J248 RNA5SP225-201ENST00000410874 135 ntBASIC-3.34□□□□□ -2.94
TRAV1-1A0A0B4J248 RNU6-986P-201ENST00000363133 102 ntBASIC-3.36□□□□□ -2.95
TRAV1-1A0A0B4J248 RNU6-59P-201ENST00000384787 107 ntBASIC-3.37□□□□□ -2.95
TRAV1-1A0A0B4J248 RNU6-838P-201ENST00000363399 108 ntBASIC-3.38□□□□□ -2.95
TRAV1-1A0A0B4J248 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.38□□□□□ -2.95
TRAV1-1A0A0B4J248 SNORD73B-201ENST00000364394 72 ntBASIC-3.4□□□□□ -2.95
TRAV1-1A0A0B4J248 MIR3668-201ENST00000582138 75 ntBASIC-3.4□□□□□ -2.95
TRAV1-1A0A0B4J248 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.41□□□□□ -2.96
TRAV1-1A0A0B4J248 SNORA26.2-201ENST00000390922 122 ntBASIC-3.41□□□□□ -2.96
TRAV1-1A0A0B4J248 RNY4P29-201ENST00000410801 97 ntBASIC-3.44□□□□□ -2.96
TRAV1-1A0A0B4J248 SNORD78.1-201ENST00000390866 65 ntBASIC-3.46□□□□□ -2.96
TRAV1-1A0A0B4J248 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.47□□□□□ -2.96
TRAV1-1A0A0B4J248 snosnR66.1-201ENST00000391095 99 ntBASIC-3.47□□□□□ -2.96
TRAV1-1A0A0B4J248 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.48□□□□□ -2.97
TRAV1-1A0A0B4J248 MIR4662A-201ENST00000637499 67 ntBASIC-3.49□□□□□ -2.97
TRAV1-1A0A0B4J248 AC079150.2-201ENST00000443733 78 ntBASIC-3.53□□□□□ -2.97
TRAV1-1A0A0B4J248 MIR3671-201ENST00000580455 88 ntBASIC-3.53□□□□□ -2.97
TRAV1-1A0A0B4J248 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.54□□□□□ -2.98
TRAV1-1A0A0B4J248 RNU6-753P-201ENST00000363926 107 ntBASIC-3.55□□□□□ -2.98
TRAV1-1A0A0B4J248 RNA5SP449-201ENST00000516871 130 ntBASIC-3.55□□□□□ -2.98
TRAV1-1A0A0B4J248 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.61□□□□□ -2.99
TRAV1-1A0A0B4J248 MIR548F3-201ENST00000408509 87 ntBASIC-3.61□□□□□ -2.99
TRAV1-1A0A0B4J248 RNA5SP170-201ENST00000517150 101 ntBASIC-3.62□□□□□ -2.99
TRAV1-1A0A0B4J248 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.63□□□□□ -2.99
TRAV1-1A0A0B4J248 RNU6-930P-201ENST00000390938 100 ntBASIC-3.63□□□□□ -2.99
TRAV1-1A0A0B4J248 RNU6-936P-201ENST00000384005 107 ntBASIC-3.64□□□□□ -2.99
TRAV1-1A0A0B4J248 RNU4-85P-201ENST00000364675 123 ntBASIC-3.65□□□□□ -2.99
TRAV1-1A0A0B4J248 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.73□□□□□ -3.01
TRAV1-1A0A0B4J248 AC125388.1-201ENST00000459631 156 ntBASIC-3.75□□□□□ -3.01
TRAV1-1A0A0B4J248 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.77□□□□□ -3.01
TRAV1-1A0A0B4J248 RNU6-499P-201ENST00000365615 107 ntBASIC-3.77□□□□□ -3.01
TRAV1-1A0A0B4J248 AL603908.1-201ENST00000406098 201 ntBASIC-3.78□□□□□ -3.01
TRAV1-1A0A0B4J248 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.81□□□□□ -3.02
TRAV1-1A0A0B4J248 RNY4P13-201ENST00000384284 96 ntBASIC-3.81□□□□□ -3.02
TRAV1-1A0A0B4J248 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.81□□□□□ -3.02
TRAV1-1A0A0B4J248 SNORD111B-201ENST00000408587 80 ntBASIC-3.81□□□□□ -3.02
TRAV1-1A0A0B4J248 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.81□□□□□ -3.02
TRAV1-1A0A0B4J248 RNU6-627P-201ENST00000364032 102 ntBASIC-3.82□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms