Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.45□□□□□ -2.64
VTA1Q9NP79 SNORA40.16-201ENST00000517238 121 ntBASIC-1.45□□□□□ -2.64
VTA1Q9NP79 MIR6874-201ENST00000635894 71 ntBASIC-1.45□□□□□ -2.64
VTA1Q9NP79 RPL35AP4-201ENST00000412007 102 ntBASIC-1.46□□□□□ -2.64
VTA1Q9NP79 AC139453.2-201ENST00000487255 133 ntBASIC-1.46□□□□□ -2.64
VTA1Q9NP79 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
VTA1Q9NP79 SNORD45.2-201ENST00000363552 72 ntBASIC-1.48□□□□□ -2.65
VTA1Q9NP79 MIR4770-201ENST00000579149 58 ntBASIC-1.48□□□□□ -2.65
VTA1Q9NP79 RNU6-118P-201ENST00000516552 102 ntBASIC-1.49□□□□□ -2.65
VTA1Q9NP79 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.51□□□□□ -2.65
VTA1Q9NP79 AC018880.2-201ENST00000414265 201 ntBASIC-1.51□□□□□ -2.65
VTA1Q9NP79 MIR6502-201ENST00000617296 76 ntBASIC-1.51□□□□□ -2.65
VTA1Q9NP79 MIR4520-1-201ENST00000582609 70 ntBASIC-1.52□□□□□ -2.65
VTA1Q9NP79 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.53□□□□□ -2.65
VTA1Q9NP79 RNU6-258P-201ENST00000390884 101 ntBASIC-1.57□□□□□ -2.66
VTA1Q9NP79 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.58□□□□□ -2.66
VTA1Q9NP79 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.6□□□□□ -2.67
VTA1Q9NP79 RNU6-788P-201ENST00000390967 104 ntBASIC-1.61□□□□□ -2.67
VTA1Q9NP79 AL451105.1-201ENST00000450005 189 ntBASIC-1.61□□□□□ -2.67
VTA1Q9NP79 SNORD18.1-201ENST00000363807 70 ntBASIC-1.62□□□□□ -2.67
VTA1Q9NP79 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
VTA1Q9NP79 RNU6-980P-201ENST00000516925 103 ntBASIC-1.62□□□□□ -2.67
VTA1Q9NP79 RNU6-419P-201ENST00000517030 63 ntBASIC-1.62□□□□□ -2.67
VTA1Q9NP79 RNU6-79P-201ENST00000362511 107 ntBASIC-1.64□□□□□ -2.67
VTA1Q9NP79 RNU6-974P-201ENST00000384099 108 ntBASIC-1.65□□□□□ -2.67
VTA1Q9NP79 RNU6-400P-201ENST00000391173 106 ntBASIC-1.65□□□□□ -2.67
VTA1Q9NP79 RNA5SP86-201ENST00000390869 98 ntBASIC-1.66□□□□□ -2.68
VTA1Q9NP79 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.67□□□□□ -2.68
VTA1Q9NP79 RNU6-446P-201ENST00000362827 106 ntBASIC-1.68□□□□□ -2.68
VTA1Q9NP79 AC120024.2-201ENST00000576526 175 ntBASIC-1.69□□□□□ -2.68
VTA1Q9NP79 MIR548X-201ENST00000580069 75 ntBASIC-1.69□□□□□ -2.68
VTA1Q9NP79 RNU6-499P-201ENST00000365615 107 ntBASIC-1.71□□□□□ -2.68
VTA1Q9NP79 MIR548H1-201ENST00000408610 102 ntBASIC-1.71□□□□□ -2.68
VTA1Q9NP79 RNU6-829P-201ENST00000363700 112 ntBASIC-1.72□□□□□ -2.68
VTA1Q9NP79 MIR633-201ENST00000384821 98 ntBASIC-1.73□□□□□ -2.69
VTA1Q9NP79 AC079150.2-201ENST00000443733 78 ntBASIC-1.74□□□□□ -2.69
VTA1Q9NP79 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.74□□□□□ -2.69
VTA1Q9NP79 RNU6-361P-201ENST00000364454 107 ntBASIC-1.75□□□□□ -2.69
VTA1Q9NP79 SNORD60-201ENST00000383903 83 ntBASIC-1.75□□□□□ -2.69
VTA1Q9NP79 MIR487B-201ENST00000385021 84 ntBASIC-1.76□□□□□ -2.69
VTA1Q9NP79 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.76□□□□□ -2.69
VTA1Q9NP79 MIR3139-201ENST00000579145 76 ntBASIC-1.76□□□□□ -2.69
VTA1Q9NP79 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.77□□□□□ -2.69
VTA1Q9NP79 RNU6-563P-201ENST00000364872 108 ntBASIC-1.77□□□□□ -2.69
VTA1Q9NP79 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.78□□□□□ -2.69
VTA1Q9NP79 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.79□□□□□ -2.7
VTA1Q9NP79 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.79□□□□□ -2.7
VTA1Q9NP79 RNU6-695P-201ENST00000391157 104 ntBASIC-1.79□□□□□ -2.7
VTA1Q9NP79 RNU6-530P-201ENST00000391180 107 ntBASIC-1.79□□□□□ -2.7
VTA1Q9NP79 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.79□□□□□ -2.7
VTA1Q9NP79 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.8□□□□□ -2.7
VTA1Q9NP79 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.8□□□□□ -2.7
VTA1Q9NP79 RNY3P8-201ENST00000411366 126 ntBASIC-1.8□□□□□ -2.7
VTA1Q9NP79 MT-TM-201ENST00000387377 68 ntBASIC-1.82□□□□□ -2.7
VTA1Q9NP79 SNORA17.4-201ENST00000391287 132 ntBASIC-1.82□□□□□ -2.7
VTA1Q9NP79 RNU6-176P-201ENST00000517196 105 ntBASIC-1.83□□□□□ -2.7
VTA1Q9NP79 MIR3123-201ENST00000583417 75 ntBASIC-1.85□□□□□ -2.71
VTA1Q9NP79 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.86□□□□□ -2.71
VTA1Q9NP79 SNORD18C-201ENST00000362704 69 ntBASIC-1.87□□□□□ -2.71
VTA1Q9NP79 MIR202-201ENST00000362219 110 ntBASIC-1.88□□□□□ -2.71
VTA1Q9NP79 SNORD113-4-201ENST00000364802 75 ntBASIC-1.88□□□□□ -2.71
VTA1Q9NP79 MIR548N-201ENST00000408742 75 ntBASIC-1.88□□□□□ -2.71
VTA1Q9NP79 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
VTA1Q9NP79 RNU6-841P-201ENST00000383872 107 ntBASIC-1.89□□□□□ -2.71
VTA1Q9NP79 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.9□□□□□ -2.71
VTA1Q9NP79 AC108019.1-201ENST00000512540 175 ntBASIC-1.9□□□□□ -2.71
VTA1Q9NP79 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.91□□□□□ -2.72
VTA1Q9NP79 MIR664B-201ENST00000626756 61 ntBASIC-1.91□□□□□ -2.72
VTA1Q9NP79 MIR4426-201ENST00000640330 63 ntBASIC-1.91□□□□□ -2.72
VTA1Q9NP79 RNU4-33P-201ENST00000364316 85 ntBASIC-1.92□□□□□ -2.72
VTA1Q9NP79 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.92□□□□□ -2.72
VTA1Q9NP79 MIR548AM-201ENST00000584298 74 ntBASIC-1.93□□□□□ -2.72
VTA1Q9NP79 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.94□□□□□ -2.72
VTA1Q9NP79 MIR4756-201ENST00000577874 78 ntBASIC-1.95□□□□□ -2.72
VTA1Q9NP79 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.96□□□□□ -2.72
VTA1Q9NP79 RNU6-300P-201ENST00000459080 104 ntBASIC-1.98□□□□□ -2.73
VTA1Q9NP79 U6.97-201ENST00000636904 101 ntBASIC-1.98□□□□□ -2.73
VTA1Q9NP79 VTRNA2-1-201ENST00000602301 127 ntBASIC-2□□□□□ -2.73
VTA1Q9NP79 SNORD19B.1-201ENST00000630615 80 ntBASIC-2□□□□□ -2.73
VTA1Q9NP79 RNA5SP405-201ENST00000363059 114 ntBASIC-2.01□□□□□ -2.73
VTA1Q9NP79 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.02□□□□□ -2.73
VTA1Q9NP79 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.02□□□□□ -2.73
VTA1Q9NP79 RNU6-614P-201ENST00000384369 107 ntBASIC-2.03□□□□□ -2.73
VTA1Q9NP79 RNU4-88P-201ENST00000411220 86 ntBASIC-2.03□□□□□ -2.73
VTA1Q9NP79 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.03□□□□□ -2.73
VTA1Q9NP79 U6.59-201ENST00000615686 107 ntBASIC-2.03□□□□□ -2.73
VTA1Q9NP79 MIR379-201ENST00000362218 67 ntBASIC-2.04□□□□□ -2.74
VTA1Q9NP79 snoU13.10-201ENST00000459301 103 ntBASIC-2.07□□□□□ -2.74
VTA1Q9NP79 MIR548W-201ENST00000581970 74 ntBASIC-2.07□□□□□ -2.74
VTA1Q9NP79 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.07□□□□□ -2.74
VTA1Q9NP79 RNU6-742P-201ENST00000365289 107 ntBASIC-2.08□□□□□ -2.74
VTA1Q9NP79 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.08□□□□□ -2.74
VTA1Q9NP79 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.09□□□□□ -2.74
VTA1Q9NP79 MIR581-201ENST00000384895 96 ntBASIC-2.1□□□□□ -2.75
VTA1Q9NP79 RNU6-808P-201ENST00000391233 108 ntBASIC-2.1□□□□□ -2.75
VTA1Q9NP79 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.12□□□□□ -2.75
VTA1Q9NP79 MIR548AL-201ENST00000578416 97 ntBASIC-2.12□□□□□ -2.75
VTA1Q9NP79 RNU6-194P-201ENST00000363862 105 ntBASIC-2.13□□□□□ -2.75
VTA1Q9NP79 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.13□□□□□ -2.75
VTA1Q9NP79 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.16□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms