Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC113139.1-201ENST00000605049 239 ntBASIC-7.5□□□□□ -3.61
VPS13AQ96RL7 RNU6-780P-201ENST00000391030 104 ntBASIC-7.51□□□□□ -3.61
VPS13AQ96RL7 AF246928.1-201ENST00000623768 87 ntBASIC-7.51□□□□□ -3.61
VPS13AQ96RL7 AC141273.2-201ENST00000618989 130 ntBASIC-7.52□□□□□ -3.61
VPS13AQ96RL7 Y_RNA.210-201ENST00000364161 110 ntBASIC-7.52□□□□□ -3.61
VPS13AQ96RL7 Y_RNA.593-201ENST00000410292 98 ntBASIC-7.52□□□□□ -3.61
VPS13AQ96RL7 Y_RNA.20-201ENST00000362479 113 ntBASIC-7.53□□□□□ -3.61
VPS13AQ96RL7 SNORD116-18-201ENST00000383961 92 ntBASIC-7.53□□□□□ -3.62
VPS13AQ96RL7 MTND5P20-201ENST00000448677 143 ntBASIC-7.53□□□□□ -3.62
VPS13AQ96RL7 RN7SKP298-201ENST00000515950 94 ntBASIC-7.53□□□□□ -3.62
VPS13AQ96RL7 RNU6-1020P-201ENST00000363684 107 ntBASIC-7.54□□□□□ -3.62
VPS13AQ96RL7 Y_RNA.662-201ENST00000516028 97 ntBASIC-7.54□□□□□ -3.62
VPS13AQ96RL7 Y_RNA.70-201ENST00000362886 110 ntBASIC-7.55□□□□□ -3.62
VPS13AQ96RL7 AL031737.1-201ENST00000450125 223 ntBASIC-7.55□□□□□ -3.62
VPS13AQ96RL7 Y_RNA.259-201ENST00000364619 101 ntBASIC-7.55□□□□□ -3.62
VPS13AQ96RL7 RNU6-1276P-201ENST00000365372 104 ntBASIC-7.55□□□□□ -3.62
VPS13AQ96RL7 SNORD116-29-201ENST00000384516 83 ntBASIC-7.56□□□□□ -3.62
VPS13AQ96RL7 SNORA26.2-201ENST00000390922 122 ntBASIC-7.56□□□□□ -3.62
VPS13AQ96RL7 SNORA40-201ENST00000388090 126 ntBASIC-7.56□□□□□ -3.62
VPS13AQ96RL7 AC022559.1-201ENST00000520905 205 ntBASIC-7.56□□□□□ -3.62
VPS13AQ96RL7 AC079150.2-201ENST00000443733 78 ntBASIC-7.57□□□□□ -3.62
VPS13AQ96RL7 SNORA33.2-201ENST00000365413 134 ntBASIC-7.57□□□□□ -3.62
VPS13AQ96RL7 MIR3611-201ENST00000584484 83 ntBASIC-7.57□□□□□ -3.62
VPS13AQ96RL7 MIR633-201ENST00000384821 98 ntBASIC-7.57□□□□□ -3.62
VPS13AQ96RL7 RNU6-242P-201ENST00000384359 107 ntBASIC-7.59□□□□□ -3.62
VPS13AQ96RL7 RNU6-426P-201ENST00000516464 97 ntBASIC-7.6□□□□□ -3.63
VPS13AQ96RL7 RNU7-152P-201ENST00000458982 64 ntBASIC-7.6□□□□□ -3.63
VPS13AQ96RL7 SNORD113-6-201ENST00000363345 75 ntBASIC-7.62□□□□□ -3.63
VPS13AQ96RL7 MIR3915-201ENST00000578518 97 ntBASIC-7.63□□□□□ -3.63
VPS13AQ96RL7 RNU6-724P-201ENST00000390958 105 ntBASIC-7.65□□□□□ -3.63
VPS13AQ96RL7 RNU6-906P-201ENST00000384700 70 ntBASIC-7.66□□□□□ -3.64
VPS13AQ96RL7 MIR569-201ENST00000385228 96 ntBASIC-7.69□□□□□ -3.64
VPS13AQ96RL7 MIR3671-201ENST00000580455 88 ntBASIC-7.71□□□□□ -3.64
VPS13AQ96RL7 Y_RNA.200-201ENST00000364018 102 ntBASIC-7.72□□□□□ -3.64
VPS13AQ96RL7 RNU6-394P-201ENST00000410735 107 ntBASIC-7.72□□□□□ -3.64
VPS13AQ96RL7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-7.73□□□□□ -3.65
VPS13AQ96RL7 RNU6-499P-201ENST00000365615 107 ntBASIC-7.73□□□□□ -3.65
VPS13AQ96RL7 RNU6-713P-201ENST00000384761 107 ntBASIC-7.74□□□□□ -3.65
VPS13AQ96RL7 MIR488-201ENST00000365739 83 ntBASIC-7.74□□□□□ -3.65
VPS13AQ96RL7 RNU6-147P-201ENST00000383983 107 ntBASIC-7.76□□□□□ -3.65
VPS13AQ96RL7 RNU6-614P-201ENST00000384369 107 ntBASIC-7.77□□□□□ -3.65
VPS13AQ96RL7 U6.59-201ENST00000615686 107 ntBASIC-7.77□□□□□ -3.65
VPS13AQ96RL7 MIR4680-201ENST00000580906 66 ntBASIC-7.77□□□□□ -3.65
VPS13AQ96RL7 MIR4760-201ENST00000585040 80 ntBASIC-7.79□□□□□ -3.66
VPS13AQ96RL7 AC113195.1-201ENST00000579952 141 ntBASIC-7.79□□□□□ -3.66
VPS13AQ96RL7 Y_RNA.197-201ENST00000364004 102 ntBASIC-7.82□□□□□ -3.66
VPS13AQ96RL7 Y_RNA.573-201ENST00000384763 105 ntBASIC-7.83□□□□□ -3.66
VPS13AQ96RL7 RNU6-314P-201ENST00000516574 104 ntBASIC-7.83□□□□□ -3.66
VPS13AQ96RL7 Y_RNA.343-201ENST00000365354 112 ntBASIC-7.83□□□□□ -3.66
VPS13AQ96RL7 RNU6-1131P-201ENST00000364955 107 ntBASIC-7.84□□□□□ -3.66
VPS13AQ96RL7 RNU6-232P-201ENST00000517144 64 ntBASIC-7.85□□□□□ -3.67
VPS13AQ96RL7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-7.86□□□□□ -3.67
VPS13AQ96RL7 Y_RNA.356-201ENST00000365475 113 ntBASIC-7.87□□□□□ -3.67
VPS13AQ96RL7 MIR548F1-201ENST00000408667 84 ntBASIC-7.9□□□□□ -3.67
VPS13AQ96RL7 RNU6-277P-201ENST00000516272 106 ntBASIC-7.91□□□□□ -3.68
VPS13AQ96RL7 MIR450A1-201ENST00000362262 91 ntBASIC-7.92□□□□□ -3.68
VPS13AQ96RL7 RNU7-125P-201ENST00000458760 62 ntBASIC-7.92□□□□□ -3.68
VPS13AQ96RL7 AC008267.6-201ENST00000441664 139 ntBASIC-7.94□□□□□ -3.68
VPS13AQ96RL7 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-7.95□□□□□ -3.68
VPS13AQ96RL7 RNU6-640P-201ENST00000363693 105 ntBASIC-7.96□□□□□ -3.68
VPS13AQ96RL7 RNU6-257P-201ENST00000410238 98 ntBASIC-7.96□□□□□ -3.68
VPS13AQ96RL7 MIR4509-3-201ENST00000578671 94 ntBASIC-7.99□□□□□ -3.69
VPS13AQ96RL7 MIR4509-2-201ENST00000583920 94 ntBASIC-7.99□□□□□ -3.69
VPS13AQ96RL7 MIR4509-1-201ENST00000618224 94 ntBASIC-7.99□□□□□ -3.69
VPS13AQ96RL7 RNU6-49P-201ENST00000384256 107 ntBASIC-8□□□□□ -3.69
VPS13AQ96RL7 Y_RNA.431-201ENST00000384086 102 ntBASIC-8□□□□□ -3.69
VPS13AQ96RL7 RNU6-804P-201ENST00000384286 107 ntBASIC-8.01□□□□□ -3.69
VPS13AQ96RL7 DEFB108C-201ENST00000400154 252 ntBASIC-8.01□□□□□ -3.69
VPS13AQ96RL7 RNU5A-2P-201ENST00000384337 116 ntBASIC-8.02□□□□□ -3.69
VPS13AQ96RL7 RNU6-589P-201ENST00000516485 107 ntBASIC-8.02□□□□□ -3.69
VPS13AQ96RL7 RNY4P14-201ENST00000363656 96 ntBASIC-8.03□□□□□ -3.69
VPS13AQ96RL7 RNU6-820P-201ENST00000384273 107 ntBASIC-8.03□□□□□ -3.7
VPS13AQ96RL7 RNU6-635P-201ENST00000516651 102 ntBASIC-8.08□□□□□ -3.7
VPS13AQ96RL7 MIR1302-3-201ENST00000408128 138 ntBASIC-8.08□□□□□ -3.7
VPS13AQ96RL7 RNU6-857P-201ENST00000515893 110 ntBASIC-8.08□□□□□ -3.7
VPS13AQ96RL7 MTND5P41-201ENST00000517498 206 ntBASIC-8.12□□□□□ -3.71
VPS13AQ96RL7 RNU6-111P-201ENST00000517179 105 ntBASIC-8.13□□□□□ -3.71
VPS13AQ96RL7 RNU6-32P-201ENST00000383948 107 ntBASIC-8.14□□□□□ -3.71
VPS13AQ96RL7 RNU6-13P-201ENST00000384248 107 ntBASIC-8.14□□□□□ -3.71
VPS13AQ96RL7 RNU6-12P-201ENST00000384604 107 ntBASIC-8.14□□□□□ -3.71
VPS13AQ96RL7 RNU6-41P-201ENST00000384741 107 ntBASIC-8.14□□□□□ -3.71
VPS13AQ96RL7 RNU6-1056P-201ENST00000383996 107 ntBASIC-8.15□□□□□ -3.71
VPS13AQ96RL7 SNORD116-14-201ENST00000383894 92 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 SNORD116-17-201ENST00000383929 92 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 SNORD116-15-201ENST00000384445 92 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 SNORD116-19-201ENST00000384729 92 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 RNU7-120P-201ENST00000459334 63 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 MIR4662A-201ENST00000637499 67 ntBASIC-8.16□□□□□ -3.72
VPS13AQ96RL7 MIR1255A-201ENST00000408338 113 ntBASIC-8.18□□□□□ -3.72
VPS13AQ96RL7 MTND4P29-201ENST00000503122 1372 ntBASIC-8.18□□□□□ -3.72
VPS13AQ96RL7 SNORD19B-201ENST00000459623 84 ntBASIC-8.19□□□□□ -3.72
VPS13AQ96RL7 Y_RNA.297-201ENST00000364950 91 ntBASIC-8.2□□□□□ -3.72
VPS13AQ96RL7 MIR450A2-201ENST00000385022 100 ntBASIC-8.2□□□□□ -3.72
VPS13AQ96RL7 MIR3128-201ENST00000581957 66 ntBASIC-8.2□□□□□ -3.72
VPS13AQ96RL7 Y_RNA.553-201ENST00000384670 102 ntBASIC-8.21□□□□□ -3.72
VPS13AQ96RL7 RNU6-200P-201ENST00000364743 107 ntBASIC-8.21□□□□□ -3.72
VPS13AQ96RL7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-8.23□□□□□ -3.73
VPS13AQ96RL7 RNU6-406P-201ENST00000516470 107 ntBASIC-8.24□□□□□ -3.73
VPS13AQ96RL7 RNU6-279P-201ENST00000391297 101 ntBASIC-8.25□□□□□ -3.73
VPS13AQ96RL7 RNU6-956P-201ENST00000458868 103 ntBASIC-8.25□□□□□ -3.73
Retrieved 100 of 98,524 protein–RNA pairs in 302.1 ms