Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 MIR3938-201ENST00000582157 103 ntBASIC-1.07□□□□□ -2.58
PRICKLE1Q96MT3 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.08□□□□□ -2.58
PRICKLE1Q96MT3 SNORA40B-201ENST00000385573 128 ntBASIC-1.08□□□□□ -2.58
PRICKLE1Q96MT3 SNORA40.16-201ENST00000517238 121 ntBASIC-1.09□□□□□ -2.58
PRICKLE1Q96MT3 MIR23C-201ENST00000579846 100 ntBASIC-1.09□□□□□ -2.58
PRICKLE1Q96MT3 SNORA27.2-201ENST00000363365 126 ntBASIC-1.1□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.1□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.1□□□□□ -2.59
PRICKLE1Q96MT3 MT-TM-201ENST00000387377 68 ntBASIC-1.1□□□□□ -2.59
PRICKLE1Q96MT3 RNU6-828P-201ENST00000364876 107 ntBASIC-1.11□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.11□□□□□ -2.59
PRICKLE1Q96MT3 MIR1207-201ENST00000408249 87 ntBASIC-1.11□□□□□ -2.59
PRICKLE1Q96MT3 AC018880.2-201ENST00000414265 201 ntBASIC-1.11□□□□□ -2.59
PRICKLE1Q96MT3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.11□□□□□ -2.59
PRICKLE1Q96MT3 RNA5SP405-201ENST00000363059 114 ntBASIC-1.12□□□□□ -2.59
PRICKLE1Q96MT3 RNU6-974P-201ENST00000384099 108 ntBASIC-1.13□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.13□□□□□ -2.59
PRICKLE1Q96MT3 RNU6-520P-201ENST00000384717 104 ntBASIC-1.13□□□□□ -2.59
PRICKLE1Q96MT3 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.13□□□□□ -2.59
PRICKLE1Q96MT3 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.13□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.15□□□□□ -2.59
PRICKLE1Q96MT3 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.15□□□□□ -2.59
PRICKLE1Q96MT3 RNU6-590P-201ENST00000365039 107 ntBASIC-1.16□□□□□ -2.6
PRICKLE1Q96MT3 MIR4723-201ENST00000585070 81 ntBASIC-1.16□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.17□□□□□ -2.6
PRICKLE1Q96MT3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.17□□□□□ -2.6
PRICKLE1Q96MT3 RNU4-88P-201ENST00000411220 86 ntBASIC-1.17□□□□□ -2.6
PRICKLE1Q96MT3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.17□□□□□ -2.6
PRICKLE1Q96MT3 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.18□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.19□□□□□ -2.6
PRICKLE1Q96MT3 AC120024.2-201ENST00000576526 175 ntBASIC-1.19□□□□□ -2.6
PRICKLE1Q96MT3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.21□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.21□□□□□ -2.6
PRICKLE1Q96MT3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.22□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.22□□□□□ -2.6
PRICKLE1Q96MT3 RNY3P8-201ENST00000411366 126 ntBASIC-1.22□□□□□ -2.6
PRICKLE1Q96MT3 AC125388.1-201ENST00000459631 156 ntBASIC-1.22□□□□□ -2.6
PRICKLE1Q96MT3 MIR3123-201ENST00000583417 75 ntBASIC-1.22□□□□□ -2.6
PRICKLE1Q96MT3 RNU6-194P-201ENST00000363862 105 ntBASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-119P-201ENST00000364882 107 ntBASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 MIR548AM-201ENST00000584298 74 ntBASIC-1.23□□□□□ -2.61
PRICKLE1Q96MT3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.24□□□□□ -2.61
PRICKLE1Q96MT3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.24□□□□□ -2.61
PRICKLE1Q96MT3 AL451105.1-201ENST00000450005 189 ntBASIC-1.25□□□□□ -2.61
PRICKLE1Q96MT3 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.25□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.26□□□□□ -2.61
PRICKLE1Q96MT3 MIR548W-201ENST00000581970 74 ntBASIC-1.26□□□□□ -2.61
PRICKLE1Q96MT3 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-446P-201ENST00000362827 106 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 SNORD45.2-201ENST00000363552 72 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 SNORD54-201ENST00000459159 67 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-419P-201ENST00000517030 63 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 AC013734.1-201ENST00000619329 111 ntBASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
PRICKLE1Q96MT3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.29□□□□□ -2.62
PRICKLE1Q96MT3 RNU6-530P-201ENST00000391180 107 ntBASIC-1.3□□□□□ -2.62
PRICKLE1Q96MT3 MIR633-201ENST00000384821 98 ntBASIC-1.31□□□□□ -2.62
PRICKLE1Q96MT3 AC139453.2-201ENST00000487255 133 ntBASIC-1.31□□□□□ -2.62
PRICKLE1Q96MT3 MIR202-201ENST00000362219 110 ntBASIC-1.32□□□□□ -2.62
PRICKLE1Q96MT3 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.32□□□□□ -2.62
PRICKLE1Q96MT3 snoU13.10-201ENST00000459301 103 ntBASIC-1.32□□□□□ -2.62
PRICKLE1Q96MT3 U6.97-201ENST00000636904 101 ntBASIC-1.32□□□□□ -2.62
PRICKLE1Q96MT3 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.33□□□□□ -2.62
PRICKLE1Q96MT3 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.34□□□□□ -2.62
PRICKLE1Q96MT3 SNORD60-201ENST00000383903 83 ntBASIC-1.34□□□□□ -2.62
PRICKLE1Q96MT3 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.34□□□□□ -2.62
PRICKLE1Q96MT3 MIR548X-201ENST00000580069 75 ntBASIC-1.34□□□□□ -2.62
PRICKLE1Q96MT3 RNU6-829P-201ENST00000363700 112 ntBASIC-1.35□□□□□ -2.63
PRICKLE1Q96MT3 RNU6-361P-201ENST00000364454 107 ntBASIC-1.35□□□□□ -2.63
PRICKLE1Q96MT3 RNU6-230P-201ENST00000362457 104 ntBASIC-1.36□□□□□ -2.63
PRICKLE1Q96MT3 SNORA17.4-201ENST00000391287 132 ntBASIC-1.36□□□□□ -2.63
PRICKLE1Q96MT3 MIR4748-201ENST00000578076 82 ntBASIC-1.36□□□□□ -2.63
PRICKLE1Q96MT3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.36□□□□□ -2.63
PRICKLE1Q96MT3 SNORD113-4-201ENST00000364802 75 ntBASIC-1.38□□□□□ -2.63
PRICKLE1Q96MT3 RNU6-141P-201ENST00000410499 105 ntBASIC-1.38□□□□□ -2.63
PRICKLE1Q96MT3 MIR548N-201ENST00000408742 75 ntBASIC-1.39□□□□□ -2.63
PRICKLE1Q96MT3 MIR4426-201ENST00000640330 63 ntBASIC-1.39□□□□□ -2.63
PRICKLE1Q96MT3 RNY4P7-201ENST00000364600 96 ntBASIC-1.4□□□□□ -2.63
PRICKLE1Q96MT3 AC079150.2-201ENST00000443733 78 ntBASIC-1.4□□□□□ -2.63
PRICKLE1Q96MT3 RNY4-201ENST00000516507 96 ntBASIC-1.4□□□□□ -2.63
PRICKLE1Q96MT3 SNORD18C-201ENST00000362704 69 ntBASIC-1.41□□□□□ -2.64
PRICKLE1Q96MT3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.41□□□□□ -2.64
PRICKLE1Q96MT3 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.42□□□□□ -2.64
PRICKLE1Q96MT3 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.43□□□□□ -2.64
PRICKLE1Q96MT3 MIR581-201ENST00000384895 96 ntBASIC-1.43□□□□□ -2.64
PRICKLE1Q96MT3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.43□□□□□ -2.64
PRICKLE1Q96MT3 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.44□□□□□ -2.64
PRICKLE1Q96MT3 RNU6-499P-201ENST00000365615 107 ntBASIC-1.45□□□□□ -2.64
PRICKLE1Q96MT3 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.45□□□□□ -2.64
PRICKLE1Q96MT3 RNU6-300P-201ENST00000459080 104 ntBASIC-1.46□□□□□ -2.64
PRICKLE1Q96MT3 RNU6-803P-201ENST00000516034 102 ntBASIC-1.46□□□□□ -2.64
PRICKLE1Q96MT3 FTX_4.1-201ENST00000616291 147 ntBASIC-1.46□□□□□ -2.64
PRICKLE1Q96MT3 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.47□□□□□ -2.64
PRICKLE1Q96MT3 SNORD113-3-201ENST00000364830 72 ntBASIC-1.47□□□□□ -2.64
PRICKLE1Q96MT3 RNU6-742P-201ENST00000365289 107 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 260.3 ms