Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.98□□□□□ -2.73
CCDC138Q96M89 RNU6-122P-201ENST00000516818 107 ntBASIC-1.98□□□□□ -2.73
CCDC138Q96M89 MIR4511-201ENST00000582784 87 ntBASIC-1.98□□□□□ -2.73
CCDC138Q96M89 MIR7110-201ENST00000612638 86 ntBASIC-1.98□□□□□ -2.73
CCDC138Q96M89 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.99□□□□□ -2.73
CCDC138Q96M89 Y_RNA.211-201ENST00000364164 101 ntBASIC-2□□□□□ -2.73
CCDC138Q96M89 Y_RNA.678-201ENST00000516408 96 ntBASIC-2□□□□□ -2.73
CCDC138Q96M89 RNU7-160P-201ENST00000516660 62 ntBASIC-2.01□□□□□ -2.73
CCDC138Q96M89 RNU6-231P-201ENST00000517122 103 ntBASIC-2.01□□□□□ -2.73
CCDC138Q96M89 MIR125B1-201ENST00000385236 88 ntBASIC-2.03□□□□□ -2.73
CCDC138Q96M89 SNORD63.2-201ENST00000516303 64 ntBASIC-2.03□□□□□ -2.73
CCDC138Q96M89 RNU6-194P-201ENST00000363862 105 ntBASIC-2.04□□□□□ -2.74
CCDC138Q96M89 RNU6-669P-201ENST00000365575 107 ntBASIC-2.04□□□□□ -2.74
CCDC138Q96M89 RNU6-800P-201ENST00000384473 103 ntBASIC-2.05□□□□□ -2.74
CCDC138Q96M89 SNORA27.2-201ENST00000363365 126 ntBASIC-2.06□□□□□ -2.74
CCDC138Q96M89 RNU6-940P-201ENST00000363433 104 ntBASIC-2.06□□□□□ -2.74
CCDC138Q96M89 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.06□□□□□ -2.74
CCDC138Q96M89 RNU6-258P-201ENST00000390884 101 ntBASIC-2.07□□□□□ -2.74
CCDC138Q96M89 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.08□□□□□ -2.74
CCDC138Q96M89 SNORD116.2-201ENST00000391251 93 ntBASIC-2.08□□□□□ -2.74
CCDC138Q96M89 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.08□□□□□ -2.74
CCDC138Q96M89 RNU6-230P-201ENST00000362457 104 ntBASIC-2.09□□□□□ -2.74
CCDC138Q96M89 RNU6-79P-201ENST00000362511 107 ntBASIC-2.1□□□□□ -2.75
CCDC138Q96M89 RNU7-119P-201ENST00000459279 63 ntBASIC-2.1□□□□□ -2.75
CCDC138Q96M89 RNU6-810P-201ENST00000364001 107 ntBASIC-2.11□□□□□ -2.75
CCDC138Q96M89 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.12□□□□□ -2.75
CCDC138Q96M89 RNU6-828P-201ENST00000364876 107 ntBASIC-2.13□□□□□ -2.75
CCDC138Q96M89 RNU6-400P-201ENST00000391173 106 ntBASIC-2.13□□□□□ -2.75
CCDC138Q96M89 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.14□□□□□ -2.75
CCDC138Q96M89 SNORA72.7-201ENST00000516349 94 ntBASIC-2.14□□□□□ -2.75
CCDC138Q96M89 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.15□□□□□ -2.75
CCDC138Q96M89 SNORA40B-201ENST00000385573 128 ntBASIC-2.15□□□□□ -2.75
CCDC138Q96M89 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.15□□□□□ -2.75
CCDC138Q96M89 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.16□□□□□ -2.76
CCDC138Q96M89 AC120024.2-201ENST00000576526 175 ntBASIC-2.16□□□□□ -2.76
CCDC138Q96M89 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.18□□□□□ -2.76
CCDC138Q96M89 MIR3938-201ENST00000582157 103 ntBASIC-2.19□□□□□ -2.76
CCDC138Q96M89 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.2□□□□□ -2.76
CCDC138Q96M89 MIR466-201ENST00000580653 84 ntBASIC-2.2□□□□□ -2.76
CCDC138Q96M89 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.2□□□□□ -2.76
CCDC138Q96M89 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.2□□□□□ -2.76
CCDC138Q96M89 RNU6-974P-201ENST00000384099 108 ntBASIC-2.21□□□□□ -2.76
CCDC138Q96M89 RNU6-563P-201ENST00000364872 108 ntBASIC-2.22□□□□□ -2.76
CCDC138Q96M89 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.22□□□□□ -2.76
CCDC138Q96M89 RNU6-520P-201ENST00000384717 104 ntBASIC-2.23□□□□□ -2.77
CCDC138Q96M89 AC110620.1-201ENST00000416042 228 ntBASIC-2.23□□□□□ -2.77
CCDC138Q96M89 AC114801.3-201ENST00000510231 177 ntBASIC-2.23□□□□□ -2.77
CCDC138Q96M89 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.24□□□□□ -2.77
CCDC138Q96M89 SNORA40.16-201ENST00000517238 121 ntBASIC-2.24□□□□□ -2.77
CCDC138Q96M89 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.26□□□□□ -2.77
CCDC138Q96M89 RNU6-471P-201ENST00000383944 106 ntBASIC-2.27□□□□□ -2.77
CCDC138Q96M89 RNU6-695P-201ENST00000391157 104 ntBASIC-2.27□□□□□ -2.77
CCDC138Q96M89 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.28□□□□□ -2.77
CCDC138Q96M89 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.29□□□□□ -2.78
CCDC138Q96M89 SNORD45.2-201ENST00000363552 72 ntBASIC-2.33□□□□□ -2.78
CCDC138Q96M89 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.33□□□□□ -2.78
CCDC138Q96M89 RNY3P8-201ENST00000411366 126 ntBASIC-2.33□□□□□ -2.78
CCDC138Q96M89 MIR3123-201ENST00000583417 75 ntBASIC-2.33□□□□□ -2.78
CCDC138Q96M89 AC013734.1-201ENST00000619329 111 ntBASIC-2.36□□□□□ -2.79
CCDC138Q96M89 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.39□□□□□ -2.79
CCDC138Q96M89 RNU6-638P-201ENST00000516582 104 ntBASIC-2.39□□□□□ -2.79
CCDC138Q96M89 MIR548AM-201ENST00000584298 74 ntBASIC-2.4□□□□□ -2.79
CCDC138Q96M89 RNU6-841P-201ENST00000383872 107 ntBASIC-2.41□□□□□ -2.8
CCDC138Q96M89 RNU4-88P-201ENST00000411220 86 ntBASIC-2.41□□□□□ -2.8
CCDC138Q96M89 AL451105.1-201ENST00000450005 189 ntBASIC-2.41□□□□□ -2.8
CCDC138Q96M89 SNORD60-201ENST00000383903 83 ntBASIC-2.42□□□□□ -2.8
CCDC138Q96M89 RNA5SP106-201ENST00000517274 100 ntBASIC-2.42□□□□□ -2.8
CCDC138Q96M89 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.43□□□□□ -2.8
CCDC138Q96M89 U6.97-201ENST00000636904 101 ntBASIC-2.43□□□□□ -2.8
CCDC138Q96M89 RNU6-987P-201ENST00000384759 104 ntBASIC-2.45□□□□□ -2.8
CCDC138Q96M89 RNU6-530P-201ENST00000391180 107 ntBASIC-2.46□□□□□ -2.8
CCDC138Q96M89 MIR202-201ENST00000362219 110 ntBASIC-2.47□□□□□ -2.8
CCDC138Q96M89 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.47□□□□□ -2.8
CCDC138Q96M89 RNU6-419P-201ENST00000517030 63 ntBASIC-2.47□□□□□ -2.8
CCDC138Q96M89 RNU6-361P-201ENST00000364454 107 ntBASIC-2.48□□□□□ -2.81
CCDC138Q96M89 MIR4748-201ENST00000578076 82 ntBASIC-2.48□□□□□ -2.81
CCDC138Q96M89 SNORA17.4-201ENST00000391287 132 ntBASIC-2.5□□□□□ -2.81
CCDC138Q96M89 SNORD18C-201ENST00000362704 69 ntBASIC-2.51□□□□□ -2.81
CCDC138Q96M89 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.51□□□□□ -2.81
CCDC138Q96M89 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.52□□□□□ -2.81
CCDC138Q96M89 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
CCDC138Q96M89 MIR548N-201ENST00000408742 75 ntBASIC-2.55□□□□□ -2.82
CCDC138Q96M89 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.55□□□□□ -2.82
CCDC138Q96M89 RNU6-590P-201ENST00000365039 107 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 RNY4P10-201ENST00000365571 96 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 MIR509-1-201ENST00000385265 94 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 MIR509-2-201ENST00000390724 91 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 snoU13.10-201ENST00000459301 103 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 MIR548W-201ENST00000581970 74 ntBASIC-2.56□□□□□ -2.82
CCDC138Q96M89 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.59□□□□□ -2.82
CCDC138Q96M89 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.6□□□□□ -2.83
CCDC138Q96M89 MIR4426-201ENST00000640330 63 ntBASIC-2.6□□□□□ -2.83
CCDC138Q96M89 AC125388.1-201ENST00000459631 156 ntBASIC-2.61□□□□□ -2.83
CCDC138Q96M89 MIR548X-201ENST00000580069 75 ntBASIC-2.62□□□□□ -2.83
CCDC138Q96M89 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.63□□□□□ -2.83
CCDC138Q96M89 RNU6-446P-201ENST00000362827 106 ntBASIC-2.64□□□□□ -2.83
CCDC138Q96M89 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.64□□□□□ -2.83
CCDC138Q96M89 MIR581-201ENST00000384895 96 ntBASIC-2.64□□□□□ -2.83
CCDC138Q96M89 RNU6-176P-201ENST00000517196 105 ntBASIC-2.65□□□□□ -2.83
CCDC138Q96M89 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.68□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms