Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORD19B-201ENST00000459623 84 ntBASIC-2.97□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 RNU6-394P-201ENST00000410735 107 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 RNU6-59P-201ENST00000384787 107 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 SNORA40-201ENST00000388090 126 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 MIR1277-201ENST00000408536 78 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 RNU7-171P-201ENST00000459581 62 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.98□□□□□ -2.89
VPS13DQ5THJ4 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.99□□□□□ -2.89
VPS13DQ5THJ4 AC114801.3-201ENST00000510231 177 ntBASIC-2.99□□□□□ -2.89
VPS13DQ5THJ4 AC022559.1-201ENST00000520905 205 ntBASIC-2.99□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.580-201ENST00000391004 95 ntBASIC-3□□□□□ -2.89
VPS13DQ5THJ4 RNU6-426P-201ENST00000516464 97 ntBASIC-3□□□□□ -2.89
VPS13DQ5THJ4 MIR4680-201ENST00000580906 66 ntBASIC-3□□□□□ -2.89
VPS13DQ5THJ4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.01□□□□□ -2.89
VPS13DQ5THJ4 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.01□□□□□ -2.89
VPS13DQ5THJ4 RNU6-635P-201ENST00000516651 102 ntBASIC-3.01□□□□□ -2.89
VPS13DQ5THJ4 AC004792.1-201ENST00000614523 137 ntBASIC-3.01□□□□□ -2.89
VPS13DQ5THJ4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.01□□□□□ -2.89
VPS13DQ5THJ4 MALAT1.1-201ENST00000618249 95 ntBASIC-3.03□□□□□ -2.89
VPS13DQ5THJ4 RNU6-539P-201ENST00000516665 103 ntBASIC-3.03□□□□□ -2.89
VPS13DQ5THJ4 MIR4511-201ENST00000582784 87 ntBASIC-3.03□□□□□ -2.89
VPS13DQ5THJ4 RNU6-81P-201ENST00000365608 104 ntBASIC-3.04□□□□□ -2.9
VPS13DQ5THJ4 RNU6-804P-201ENST00000384286 107 ntBASIC-3.04□□□□□ -2.9
VPS13DQ5THJ4 RNY3P1-201ENST00000365085 102 ntBASIC-3.04□□□□□ -2.9
VPS13DQ5THJ4 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.05□□□□□ -2.9
VPS13DQ5THJ4 AL353621.2-201ENST00000605340 133 ntBASIC-3.05□□□□□ -2.9
VPS13DQ5THJ4 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.06□□□□□ -2.9
VPS13DQ5THJ4 RNU6-584P-201ENST00000410350 95 ntBASIC-3.06□□□□□ -2.9
VPS13DQ5THJ4 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.07□□□□□ -2.9
VPS13DQ5THJ4 SNORD42.2-201ENST00000365570 69 ntBASIC-3.07□□□□□ -2.9
VPS13DQ5THJ4 MIR548F1-201ENST00000408667 84 ntBASIC-3.07□□□□□ -2.9
VPS13DQ5THJ4 RNU6-463P-201ENST00000384340 107 ntBASIC-3.07□□□□□ -2.9
VPS13DQ5THJ4 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.08□□□□□ -2.9
VPS13DQ5THJ4 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.08□□□□□ -2.9
VPS13DQ5THJ4 MIR4666B-201ENST00000578142 81 ntBASIC-3.08□□□□□ -2.9
VPS13DQ5THJ4 RNU6-446P-201ENST00000362827 106 ntBASIC-3.08□□□□□ -2.9
VPS13DQ5THJ4 SNORA20.1-201ENST00000364790 130 ntBASIC-3.09□□□□□ -2.9
VPS13DQ5THJ4 MIR4712-201ENST00000583750 82 ntBASIC-3.09□□□□□ -2.9
VPS13DQ5THJ4 MIR1302-1-201ENST00000637932 143 ntBASIC-3.09□□□□□ -2.9
VPS13DQ5THJ4 RNU6-153P-201ENST00000364422 104 ntBASIC-3.1□□□□□ -2.91
VPS13DQ5THJ4 IGLL4P-201ENST00000614590 133 ntBASIC-3.1□□□□□ -2.91
VPS13DQ5THJ4 AC134503.1-201ENST00000633048 54 ntBASIC-3.1□□□□□ -2.91
VPS13DQ5THJ4 RNY4P19-201ENST00000362530 96 ntBASIC-3.11□□□□□ -2.91
VPS13DQ5THJ4 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.11□□□□□ -2.91
VPS13DQ5THJ4 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.11□□□□□ -2.91
VPS13DQ5THJ4 MIR3128-201ENST00000581957 66 ntBASIC-3.11□□□□□ -2.91
VPS13DQ5THJ4 RNU6-471P-201ENST00000383944 106 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 MIR5588-201ENST00000581890 63 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 MTND5P20-201ENST00000448677 143 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 MIR569-201ENST00000385228 96 ntBASIC-3.12□□□□□ -2.91
VPS13DQ5THJ4 AC069439.1-201ENST00000494739 167 ntBASIC-3.13□□□□□ -2.91
VPS13DQ5THJ4 MT-TL1-201ENST00000386347 75 ntBASIC-3.13□□□□□ -2.91
VPS13DQ5THJ4 AC141273.2-201ENST00000618989 130 ntBASIC-3.14□□□□□ -2.91
VPS13DQ5THJ4 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.14□□□□□ -2.91
VPS13DQ5THJ4 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.14□□□□□ -2.91
VPS13DQ5THJ4 RNU6-718P-201ENST00000516166 105 ntBASIC-3.14□□□□□ -2.91
VPS13DQ5THJ4 RNU6-930P-201ENST00000390938 100 ntBASIC-3.16□□□□□ -2.91
VPS13DQ5THJ4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.16□□□□□ -2.91
VPS13DQ5THJ4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.16□□□□□ -2.91
VPS13DQ5THJ4 SNORD113-4-201ENST00000364802 75 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 SNORD111B-201ENST00000408587 80 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 RNU6-829P-201ENST00000363700 112 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 RNU6-485P-201ENST00000363475 107 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 RNU6-753P-201ENST00000363926 107 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 MIR620-201ENST00000385232 95 ntBASIC-3.17□□□□□ -2.92
VPS13DQ5THJ4 RNU6-257P-201ENST00000410238 98 ntBASIC-3.18□□□□□ -2.92
VPS13DQ5THJ4 RNU6-589P-201ENST00000516485 107 ntBASIC-3.19□□□□□ -2.92
VPS13DQ5THJ4 RNU7-120P-201ENST00000459334 63 ntBASIC-3.19□□□□□ -2.92
VPS13DQ5THJ4 MTND4P29-201ENST00000503122 1372 ntBASIC-3.19□□□□□ -2.92
VPS13DQ5THJ4 RNU6-200P-201ENST00000364743 107 ntBASIC-3.2□□□□□ -2.92
VPS13DQ5THJ4 RNU6-133P-201ENST00000383989 107 ntBASIC-3.2□□□□□ -2.92
VPS13DQ5THJ4 RNU6-111P-201ENST00000517179 105 ntBASIC-3.2□□□□□ -2.92
VPS13DQ5THJ4 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.21□□□□□ -2.92
VPS13DQ5THJ4 RNU2-16P-201ENST00000410712 136 ntBASIC-3.21□□□□□ -2.92
VPS13DQ5THJ4 U6.103-201ENST00000637085 61 ntBASIC-3.21□□□□□ -2.92
VPS13DQ5THJ4 RNU6-892P-201ENST00000410335 99 ntBASIC-3.21□□□□□ -2.92
VPS13DQ5THJ4 RNU6-242P-201ENST00000384359 107 ntBASIC-3.22□□□□□ -2.92
VPS13DQ5THJ4 U6.111-201ENST00000636093 83 ntBASIC-3.22□□□□□ -2.92
VPS13DQ5THJ4 MT-TD-201ENST00000387419 68 ntBASIC-3.22□□□□□ -2.92
VPS13DQ5THJ4 AL117351.2-201ENST00000513571 157 ntBASIC-3.22□□□□□ -2.92
VPS13DQ5THJ4 RNU6-474P-201ENST00000384243 107 ntBASIC-3.24□□□□□ -2.93
VPS13DQ5THJ4 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.25□□□□□ -2.93
VPS13DQ5THJ4 MIR450A1-201ENST00000362262 91 ntBASIC-3.25□□□□□ -2.93
VPS13DQ5THJ4 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.25□□□□□ -2.93
VPS13DQ5THJ4 RNU6-820P-201ENST00000384273 107 ntBASIC-3.25□□□□□ -2.93
VPS13DQ5THJ4 AC008267.6-201ENST00000441664 139 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 RNU6-32P-201ENST00000383948 107 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 RNU6-13P-201ENST00000384248 107 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 RNU6-12P-201ENST00000384604 107 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 RNU6-41P-201ENST00000384741 107 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 RNU6-936P-201ENST00000384005 107 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.26□□□□□ -2.93
VPS13DQ5THJ4 SNORA26.2-201ENST00000390922 122 ntBASIC-3.27□□□□□ -2.93
VPS13DQ5THJ4 MIR3171-201ENST00000584270 74 ntBASIC-3.28□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms