Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-627P-201ENST00000364032 102 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-804P-201ENST00000384286 107 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-634P-201ENST00000459134 106 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 MIR3171-201ENST00000584270 74 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-219P-201ENST00000364728 107 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 RNU6-122P-201ENST00000516818 107 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 AC141273.2-201ENST00000618989 130 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.84□□□□□ -2.86
PRKDCP78527 RNU6-959P-201ENST00000384671 107 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 RNU6-875P-201ENST00000516488 106 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 RNU4-33P-201ENST00000364316 85 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 AC004792.1-201ENST00000614523 137 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 MIR548BB-201ENST00000626714 66 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 MIR1245B-201ENST00000636115 69 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 MIR548H4-201ENST00000408689 111 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.87□□□□□ -2.87
PRKDCP78527 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.87□□□□□ -2.87
PRKDCP78527 RNU6-808P-201ENST00000391233 108 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-907P-201ENST00000390924 102 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-844P-201ENST00000517175 102 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-111P-201ENST00000517179 105 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 SNORD30.1-201ENST00000391309 70 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 U7.4-201ENST00000614961 63 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 RNU7-120P-201ENST00000459334 63 ntBASIC-2.91□□□□□ -2.87
PRKDCP78527 MTND4P29-201ENST00000503122 1372 ntBASIC-2.91□□□□□ -2.88
PRKDCP78527 AC044792.1-201ENST00000593294 196 ntBASIC-2.91□□□□□ -2.88
PRKDCP78527 AC062037.2-201ENST00000610137 73 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 RNU7-171P-201ENST00000459581 62 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 MTND5P20-201ENST00000448677 143 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 MIR569-201ENST00000385228 96 ntBASIC-2.94□□□□□ -2.88
PRKDCP78527 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AL589823.1-201ENST00000429577 183 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AL117351.2-201ENST00000513571 157 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AC103706.3-201ENST00000636297 85 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 SNORA25.4-201ENST00000363666 124 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 MIR1302-3-201ENST00000408128 138 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 RNU6-687P-201ENST00000516443 89 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 MTATP8P1-201ENST00000467115 207 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 AC090425.1-201ENST00000610007 140 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.98□□□□□ -2.89
PRKDCP78527 RNU6-871P-201ENST00000516122 100 ntBASIC-2.98□□□□□ -2.89
PRKDCP78527 MIR3134-201ENST00000579433 74 ntBASIC-2.99□□□□□ -2.89
PRKDCP78527 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.99□□□□□ -2.89
PRKDCP78527 Y_RNA.149-201ENST00000363558 117 ntBASIC-3□□□□□ -2.89
PRKDCP78527 AC008737.2-201ENST00000599446 118 ntBASIC-3□□□□□ -2.89
PRKDCP78527 IGLL4P-201ENST00000614590 133 ntBASIC-3□□□□□ -2.89
PRKDCP78527 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.01□□□□□ -2.89
PRKDCP78527 RNU6-589P-201ENST00000516485 107 ntBASIC-3.01□□□□□ -2.89
PRKDCP78527 RNU6-257P-201ENST00000410238 98 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 RNU6-200P-201ENST00000364743 107 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 RNU6-209P-201ENST00000384118 107 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 AC110620.1-201ENST00000416042 228 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 MIR4511-201ENST00000582784 87 ntBASIC-3.04□□□□□ -2.9
PRKDCP78527 AC008267.6-201ENST00000441664 139 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 MTND5P41-201ENST00000517498 206 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 RNU6-838P-201ENST00000363399 108 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 MTCYBP9-201ENST00000431021 303 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 MALAT1.1-201ENST00000618249 95 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 SNORD113-1-201ENST00000365321 69 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 MIR4795-201ENST00000584182 89 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 AC114801.3-201ENST00000510231 177 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.09□□□□□ -2.9
PRKDCP78527 MIR450A1-201ENST00000362262 91 ntBASIC-3.09□□□□□ -2.9
PRKDCP78527 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 RNU6-242P-201ENST00000384359 107 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 MIR4712-201ENST00000583750 82 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 RNU6-986P-201ENST00000363133 102 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR4666B-201ENST00000578142 81 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR4760-201ENST00000585040 80 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR494-201ENST00000349529 81 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-32P-201ENST00000383948 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-13P-201ENST00000384248 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-12P-201ENST00000384604 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-41P-201ENST00000384741 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 RNU7-200P-201ENST00000516105 62 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 MIR548F4-201ENST00000408515 105 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 RNU6-539P-201ENST00000516665 103 ntBASIC-3.13□□□□□ -2.91
PRKDCP78527 RNU6-738P-201ENST00000384531 106 ntBASIC-3.14□□□□□ -2.91
PRKDCP78527 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.14□□□□□ -2.91
PRKDCP78527 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.14□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms