Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.4□□□□□ -2.63
NKX6-1P78426 SNORA27.2-201ENST00000363365 126 ntBASIC-1.41□□□□□ -2.64
NKX6-1P78426 RNU6-164P-201ENST00000364604 103 ntBASIC-1.41□□□□□ -2.64
NKX6-1P78426 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.43□□□□□ -2.64
NKX6-1P78426 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.43□□□□□ -2.64
NKX6-1P78426 RNA5SP86-201ENST00000390869 98 ntBASIC-1.45□□□□□ -2.64
NKX6-1P78426 AC018880.2-201ENST00000414265 201 ntBASIC-1.45□□□□□ -2.64
NKX6-1P78426 SNORA40.16-201ENST00000517238 121 ntBASIC-1.45□□□□□ -2.64
NKX6-1P78426 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.46□□□□□ -2.64
NKX6-1P78426 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.46□□□□□ -2.64
NKX6-1P78426 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.48□□□□□ -2.65
NKX6-1P78426 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.48□□□□□ -2.65
NKX6-1P78426 RNU6-258P-201ENST00000390884 101 ntBASIC-1.49□□□□□ -2.65
NKX6-1P78426 MIR548H1-201ENST00000408610 102 ntBASIC-1.49□□□□□ -2.65
NKX6-1P78426 SNORD18.1-201ENST00000363807 70 ntBASIC-1.51□□□□□ -2.65
NKX6-1P78426 MIR487B-201ENST00000385021 84 ntBASIC-1.51□□□□□ -2.65
NKX6-1P78426 SNORD45.2-201ENST00000363552 72 ntBASIC-1.52□□□□□ -2.65
NKX6-1P78426 RNU6-118P-201ENST00000516552 102 ntBASIC-1.52□□□□□ -2.65
NKX6-1P78426 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.54□□□□□ -2.66
NKX6-1P78426 AC139453.2-201ENST00000487255 133 ntBASIC-1.55□□□□□ -2.66
NKX6-1P78426 RNU6-974P-201ENST00000384099 108 ntBASIC-1.56□□□□□ -2.66
NKX6-1P78426 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.58□□□□□ -2.66
NKX6-1P78426 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.6□□□□□ -2.67
NKX6-1P78426 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
NKX6-1P78426 AC120024.2-201ENST00000576526 175 ntBASIC-1.61□□□□□ -2.67
NKX6-1P78426 AL451105.1-201ENST00000450005 189 ntBASIC-1.62□□□□□ -2.67
NKX6-1P78426 AC108019.1-201ENST00000512540 175 ntBASIC-1.62□□□□□ -2.67
NKX6-1P78426 RNU6-79P-201ENST00000362511 107 ntBASIC-1.64□□□□□ -2.67
NKX6-1P78426 RNU6-980P-201ENST00000516925 103 ntBASIC-1.64□□□□□ -2.67
NKX6-1P78426 RNU6-419P-201ENST00000517030 63 ntBASIC-1.64□□□□□ -2.67
NKX6-1P78426 MIR4756-201ENST00000577874 78 ntBASIC-1.64□□□□□ -2.67
NKX6-1P78426 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
NKX6-1P78426 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.65□□□□□ -2.67
NKX6-1P78426 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.66□□□□□ -2.68
NKX6-1P78426 RNU6-400P-201ENST00000391173 106 ntBASIC-1.66□□□□□ -2.68
NKX6-1P78426 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.66□□□□□ -2.68
NKX6-1P78426 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.67□□□□□ -2.68
NKX6-1P78426 MIR633-201ENST00000384821 98 ntBASIC-1.67□□□□□ -2.68
NKX6-1P78426 RNU6-446P-201ENST00000362827 106 ntBASIC-1.68□□□□□ -2.68
NKX6-1P78426 RNY3P8-201ENST00000411366 126 ntBASIC-1.69□□□□□ -2.68
NKX6-1P78426 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.7□□□□□ -2.68
NKX6-1P78426 RNU6-788P-201ENST00000390967 104 ntBASIC-1.7□□□□□ -2.68
NKX6-1P78426 RNU6-530P-201ENST00000391180 107 ntBASIC-1.7□□□□□ -2.68
NKX6-1P78426 MIR548X-201ENST00000580069 75 ntBASIC-1.71□□□□□ -2.68
NKX6-1P78426 MIR664B-201ENST00000626756 61 ntBASIC-1.71□□□□□ -2.68
NKX6-1P78426 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.72□□□□□ -2.68
NKX6-1P78426 SNORD60-201ENST00000383903 83 ntBASIC-1.72□□□□□ -2.68
NKX6-1P78426 RNU6-829P-201ENST00000363700 112 ntBASIC-1.73□□□□□ -2.69
NKX6-1P78426 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.73□□□□□ -2.69
NKX6-1P78426 RNU6-563P-201ENST00000364872 108 ntBASIC-1.73□□□□□ -2.69
NKX6-1P78426 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.74□□□□□ -2.69
NKX6-1P78426 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.75□□□□□ -2.69
NKX6-1P78426 RNU6-499P-201ENST00000365615 107 ntBASIC-1.75□□□□□ -2.69
NKX6-1P78426 AC013734.1-201ENST00000619329 111 ntBASIC-1.77□□□□□ -2.69
NKX6-1P78426 MIR202-201ENST00000362219 110 ntBASIC-1.78□□□□□ -2.69
NKX6-1P78426 RNU6-361P-201ENST00000364454 107 ntBASIC-1.78□□□□□ -2.69
NKX6-1P78426 AC079150.2-201ENST00000443733 78 ntBASIC-1.78□□□□□ -2.69
NKX6-1P78426 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.79□□□□□ -2.7
NKX6-1P78426 SNORA17.4-201ENST00000391287 132 ntBASIC-1.79□□□□□ -2.7
NKX6-1P78426 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.8□□□□□ -2.7
NKX6-1P78426 RNU6-695P-201ENST00000391157 104 ntBASIC-1.8□□□□□ -2.7
NKX6-1P78426 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.8□□□□□ -2.7
NKX6-1P78426 MIR3139-201ENST00000579145 76 ntBASIC-1.8□□□□□ -2.7
NKX6-1P78426 U6.97-201ENST00000636904 101 ntBASIC-1.8□□□□□ -2.7
NKX6-1P78426 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.82□□□□□ -2.7
NKX6-1P78426 RNA5SP405-201ENST00000363059 114 ntBASIC-1.83□□□□□ -2.7
NKX6-1P78426 MIR3123-201ENST00000583417 75 ntBASIC-1.83□□□□□ -2.7
NKX6-1P78426 MIR548AM-201ENST00000584298 74 ntBASIC-1.83□□□□□ -2.7
NKX6-1P78426 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.83□□□□□ -2.7
NKX6-1P78426 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
NKX6-1P78426 SNORD113-4-201ENST00000364802 75 ntBASIC-1.84□□□□□ -2.7
NKX6-1P78426 RNU4-88P-201ENST00000411220 86 ntBASIC-1.84□□□□□ -2.7
NKX6-1P78426 RNU6-194P-201ENST00000363862 105 ntBASIC-1.85□□□□□ -2.71
NKX6-1P78426 MIR4426-201ENST00000640330 63 ntBASIC-1.85□□□□□ -2.71
NKX6-1P78426 SNORD18C-201ENST00000362704 69 ntBASIC-1.86□□□□□ -2.71
NKX6-1P78426 RNU6-841P-201ENST00000383872 107 ntBASIC-1.86□□□□□ -2.71
NKX6-1P78426 MT-TM-201ENST00000387377 68 ntBASIC-1.86□□□□□ -2.71
NKX6-1P78426 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.87□□□□□ -2.71
NKX6-1P78426 RNU6-176P-201ENST00000517196 105 ntBASIC-1.87□□□□□ -2.71
NKX6-1P78426 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.87□□□□□ -2.71
NKX6-1P78426 MIR548N-201ENST00000408742 75 ntBASIC-1.88□□□□□ -2.71
NKX6-1P78426 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.89□□□□□ -2.71
NKX6-1P78426 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.89□□□□□ -2.71
NKX6-1P78426 RNU4-33P-201ENST00000364316 85 ntBASIC-1.91□□□□□ -2.72
NKX6-1P78426 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.91□□□□□ -2.72
NKX6-1P78426 RNU6-300P-201ENST00000459080 104 ntBASIC-1.91□□□□□ -2.72
NKX6-1P78426 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.97□□□□□ -2.72
NKX6-1P78426 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.97□□□□□ -2.72
NKX6-1P78426 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.98□□□□□ -2.73
NKX6-1P78426 RNU6-742P-201ENST00000365289 107 ntBASIC-2□□□□□ -2.73
NKX6-1P78426 RNU6-614P-201ENST00000384369 107 ntBASIC-2.02□□□□□ -2.73
NKX6-1P78426 MIR581-201ENST00000384895 96 ntBASIC-2.02□□□□□ -2.73
NKX6-1P78426 MIR548W-201ENST00000581970 74 ntBASIC-2.02□□□□□ -2.73
NKX6-1P78426 U6.59-201ENST00000615686 107 ntBASIC-2.02□□□□□ -2.73
NKX6-1P78426 snoU13.10-201ENST00000459301 103 ntBASIC-2.03□□□□□ -2.73
NKX6-1P78426 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.04□□□□□ -2.74
NKX6-1P78426 MIR379-201ENST00000362218 67 ntBASIC-2.05□□□□□ -2.74
NKX6-1P78426 MIR4748-201ENST00000578076 82 ntBASIC-2.05□□□□□ -2.74
NKX6-1P78426 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.06□□□□□ -2.74
NKX6-1P78426 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms