Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SNORD45.2-201ENST00000363552 72 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 SNORD116-21-201ENST00000384507 92 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-109P-201ENST00000516364 107 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-184P-201ENST00000516514 107 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 SNORA40-201ENST00000388090 126 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 RNU6-388P-201ENST00000517012 105 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 RNU6-389P-201ENST00000517048 105 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 AL031737.1-201ENST00000450125 223 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.29□□□□□ -2.62
ABCA4P78363 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.29□□□□□ -2.62
ABCA4P78363 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 RNU6-219P-201ENST00000364728 107 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 RNU6-804P-201ENST00000384286 107 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 MTND3P3-201ENST00000505004 126 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 RNU6-589P-201ENST00000516485 107 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 RNU6-875P-201ENST00000516488 106 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 MIR4511-201ENST00000582784 87 ntBASIC-1.3□□□□□ -2.62
ABCA4P78363 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 MT-TD-201ENST00000387419 68 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 AL451105.1-201ENST00000450005 189 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 RNU6-485P-201ENST00000363475 107 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 MIR1255A-201ENST00000408338 113 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 MIR548F4-201ENST00000408515 105 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 AL117187.1-201ENST00000555482 181 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 MIR4795-201ENST00000584182 89 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 MALAT1.1-201ENST00000618249 95 ntBASIC-1.31□□□□□ -2.62
ABCA4P78363 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 SNORA33.2-201ENST00000365413 134 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 MTND5P20-201ENST00000448677 143 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 MIR4712-201ENST00000583750 82 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 MIR548BB-201ENST00000626714 66 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 RNU6-640P-201ENST00000363693 105 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 MIR569-201ENST00000385228 96 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 RNU6-257P-201ENST00000410238 98 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 AL117351.2-201ENST00000513571 157 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 AC090425.1-201ENST00000610007 140 ntBASIC-1.32□□□□□ -2.62
ABCA4P78363 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.32□□□□□ -2.62
ABCA4P78363 MIR1302-5-201ENST00000408164 150 ntBASIC-1.33□□□□□ -2.62
ABCA4P78363 RNU6-584P-201ENST00000410350 95 ntBASIC-1.33□□□□□ -2.62
ABCA4P78363 AC026407.1-201ENST00000518369 204 ntBASIC-1.33□□□□□ -2.62
ABCA4P78363 MIR3914-2-201ENST00000637339 95 ntBASIC-1.33□□□□□ -2.62
ABCA4P78363 MIR606-201ENST00000384851 96 ntBASIC-1.34□□□□□ -2.62
ABCA4P78363 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.34□□□□□ -2.62
ABCA4P78363 RNU6-634P-201ENST00000459134 106 ntBASIC-1.35□□□□□ -2.62
ABCA4P78363 RNU6-446P-201ENST00000362827 106 ntBASIC-1.35□□□□□ -2.63
ABCA4P78363 RNU6-894P-201ENST00000517094 105 ntBASIC-1.35□□□□□ -2.63
ABCA4P78363 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.35□□□□□ -2.63
ABCA4P78363 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.36□□□□□ -2.63
ABCA4P78363 RNU6-916P-201ENST00000516088 109 ntBASIC-1.36□□□□□ -2.63
ABCA4P78363 MIR494-201ENST00000349529 81 ntBASIC-1.36□□□□□ -2.63
ABCA4P78363 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.36□□□□□ -2.63
ABCA4P78363 AL157777.2-201ENST00000258070 137 ntBASIC-1.37□□□□□ -2.63
ABCA4P78363 RNU6-829P-201ENST00000363700 112 ntBASIC-1.37□□□□□ -2.63
ABCA4P78363 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.37□□□□□ -2.63
ABCA4P78363 RNU6-659P-201ENST00000516454 104 ntBASIC-1.37□□□□□ -2.63
ABCA4P78363 RNU6-623P-201ENST00000363143 105 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 RNY4P30-201ENST00000410216 95 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 SNORA26.2-201ENST00000390922 122 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 AC110620.1-201ENST00000416042 228 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 RNU6-539P-201ENST00000516665 103 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.38□□□□□ -2.63
ABCA4P78363 SNORD113-4-201ENST00000364802 75 ntBASIC-1.39□□□□□ -2.63
ABCA4P78363 MT-TG-201ENST00000387429 68 ntBASIC-1.39□□□□□ -2.63
ABCA4P78363 RNA5SP225-201ENST00000410874 135 ntBASIC-1.39□□□□□ -2.63
ABCA4P78363 MTCYBP9-201ENST00000431021 303 ntBASIC-1.39□□□□□ -2.63
ABCA4P78363 RNU6-279P-201ENST00000391297 101 ntBASIC-1.4□□□□□ -2.63
ABCA4P78363 AC062037.2-201ENST00000610137 73 ntBASIC-1.4□□□□□ -2.63
ABCA4P78363 RNU6-687P-201ENST00000516443 89 ntBASIC-1.4□□□□□ -2.63
ABCA4P78363 MIR4679-1-201ENST00000637619 75 ntBASIC-1.4□□□□□ -2.63
ABCA4P78363 RNU6-200P-201ENST00000364743 107 ntBASIC-1.41□□□□□ -2.63
ABCA4P78363 RNU6-147P-201ENST00000383983 107 ntBASIC-1.41□□□□□ -2.63
ABCA4P78363 RNU6-49P-201ENST00000384256 107 ntBASIC-1.41□□□□□ -2.63
ABCA4P78363 RNU6-394P-201ENST00000410735 107 ntBASIC-1.41□□□□□ -2.63
ABCA4P78363 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.41□□□□□ -2.64
ABCA4P78363 AC008737.2-201ENST00000599446 118 ntBASIC-1.41□□□□□ -2.64
ABCA4P78363 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.42□□□□□ -2.64
ABCA4P78363 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.42□□□□□ -2.64
ABCA4P78363 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.42□□□□□ -2.64
ABCA4P78363 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.42□□□□□ -2.64
ABCA4P78363 RNU6-346P-201ENST00000516288 111 ntBASIC-1.42□□□□□ -2.64
ABCA4P78363 SNORA20.1-201ENST00000364790 130 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 MIR488-201ENST00000365739 83 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 RNU6-153P-201ENST00000364422 104 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 RNU6-59P-201ENST00000384787 107 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 MTCYBP6-201ENST00000441810 138 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 AC114801.3-201ENST00000510231 177 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 MIR3134-201ENST00000579433 74 ntBASIC-1.43□□□□□ -2.64
ABCA4P78363 AC044792.1-201ENST00000593294 196 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms