Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNU6-406P-201ENST00000516470 107 ntBASIC-1.31□□□□□ -2.62
COL4A1P02462 RNU6-194P-201ENST00000363862 105 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 MIR1255A-201ENST00000408338 113 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 MIR548N-201ENST00000408742 75 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.32□□□□□ -2.62
COL4A1P02462 RNU6-153P-201ENST00000364422 104 ntBASIC-1.33□□□□□ -2.62
COL4A1P02462 RNU6-649P-201ENST00000384463 107 ntBASIC-1.33□□□□□ -2.62
COL4A1P02462 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.33□□□□□ -2.62
COL4A1P02462 RNU6-634P-201ENST00000459134 106 ntBASIC-1.34□□□□□ -2.62
COL4A1P02462 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.34□□□□□ -2.62
COL4A1P02462 MIR3938-201ENST00000582157 103 ntBASIC-1.34□□□□□ -2.62
COL4A1P02462 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.34□□□□□ -2.62
COL4A1P02462 MIR379-201ENST00000362218 67 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 MIR202-201ENST00000362219 110 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 RNU6-828P-201ENST00000364876 107 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 SNORA40B-201ENST00000385573 128 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 AL603908.1-201ENST00000406098 201 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 RNU6-912P-201ENST00000363800 104 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 RNU6-573P-201ENST00000383938 106 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 RNU6-803P-201ENST00000516034 102 ntBASIC-1.35□□□□□ -2.63
COL4A1P02462 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.35□□□□□ -2.63
COL4A1P02462 SNORD30.1-201ENST00000391309 70 ntBASIC-1.36□□□□□ -2.63
COL4A1P02462 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.36□□□□□ -2.63
COL4A1P02462 RNU7-119P-201ENST00000459279 63 ntBASIC-1.36□□□□□ -2.63
COL4A1P02462 RNU6-231P-201ENST00000517122 103 ntBASIC-1.36□□□□□ -2.63
COL4A1P02462 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.37□□□□□ -2.63
COL4A1P02462 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.37□□□□□ -2.63
COL4A1P02462 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.37□□□□□ -2.63
COL4A1P02462 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.38□□□□□ -2.63
COL4A1P02462 RNU6-530P-201ENST00000391180 107 ntBASIC-1.38□□□□□ -2.63
COL4A1P02462 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.39□□□□□ -2.63
COL4A1P02462 RNU6-176P-201ENST00000517196 105 ntBASIC-1.39□□□□□ -2.63
COL4A1P02462 MIR4511-201ENST00000582784 87 ntBASIC-1.39□□□□□ -2.63
COL4A1P02462 AC062037.1-201ENST00000605302 128 ntBASIC-1.39□□□□□ -2.63
COL4A1P02462 RNU6-419P-201ENST00000517030 63 ntBASIC-1.39□□□□□ -2.63
COL4A1P02462 SNORA25.4-201ENST00000363666 124 ntBASIC-1.4□□□□□ -2.63
COL4A1P02462 SNORA40.16-201ENST00000517238 121 ntBASIC-1.42□□□□□ -2.64
COL4A1P02462 MIR4748-201ENST00000578076 82 ntBASIC-1.42□□□□□ -2.64
COL4A1P02462 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.42□□□□□ -2.64
COL4A1P02462 AC103706.3-201ENST00000636297 85 ntBASIC-1.42□□□□□ -2.64
COL4A1P02462 U2.22-201ENST00000636441 106 ntBASIC-1.42□□□□□ -2.64
COL4A1P02462 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.43□□□□□ -2.64
COL4A1P02462 AC097484.2-201ENST00000509147 251 ntBASIC-1.43□□□□□ -2.64
COL4A1P02462 SNORD73B-201ENST00000364394 72 ntBASIC-1.44□□□□□ -2.64
COL4A1P02462 AC110620.1-201ENST00000416042 228 ntBASIC-1.44□□□□□ -2.64
COL4A1P02462 AL451105.1-201ENST00000450005 189 ntBASIC-1.44□□□□□ -2.64
COL4A1P02462 RNU6-122P-201ENST00000516818 107 ntBASIC-1.44□□□□□ -2.64
COL4A1P02462 MIR466-201ENST00000580653 84 ntBASIC-1.44□□□□□ -2.64
COL4A1P02462 RNU6-300P-201ENST00000459080 104 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 RNU6-871P-201ENST00000516122 100 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 RNU6-857P-201ENST00000515893 110 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 RNU6-539P-201ENST00000516665 103 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 MIR3202-2-201ENST00000635980 79 ntBASIC-1.45□□□□□ -2.64
COL4A1P02462 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.46□□□□□ -2.64
COL4A1P02462 RNU6-279P-201ENST00000391297 101 ntBASIC-1.46□□□□□ -2.64
COL4A1P02462 MIR548X-201ENST00000580069 75 ntBASIC-1.46□□□□□ -2.64
COL4A1P02462 RNU6-590P-201ENST00000365039 107 ntBASIC-1.47□□□□□ -2.64
COL4A1P02462 FTX_4.1-201ENST00000616291 147 ntBASIC-1.47□□□□□ -2.64
COL4A1P02462 MIR4679-1-201ENST00000637619 75 ntBASIC-1.47□□□□□ -2.64
COL4A1P02462 RNU6-742P-201ENST00000365289 107 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 SNORA26.2-201ENST00000390922 122 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 MIR4426-201ENST00000640330 63 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 RNU6-68P-201ENST00000516576 104 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 MIR4662A-201ENST00000637499 67 ntBASIC-1.48□□□□□ -2.65
COL4A1P02462 RNY4P9-201ENST00000363194 97 ntBASIC-1.49□□□□□ -2.65
COL4A1P02462 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.49□□□□□ -2.65
COL4A1P02462 RNY4P29-201ENST00000410801 97 ntBASIC-1.5□□□□□ -2.65
COL4A1P02462 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.51□□□□□ -2.65
COL4A1P02462 RNU6-471P-201ENST00000383944 106 ntBASIC-1.51□□□□□ -2.65
COL4A1P02462 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.51□□□□□ -2.65
COL4A1P02462 RNA5SP170-201ENST00000517150 101 ntBASIC-1.51□□□□□ -2.65
COL4A1P02462 U6.111-201ENST00000636093 83 ntBASIC-1.52□□□□□ -2.65
COL4A1P02462 RNU6-230P-201ENST00000362457 104 ntBASIC-1.53□□□□□ -2.65
COL4A1P02462 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
COL4A1P02462 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.54□□□□□ -2.66
COL4A1P02462 SNORD113-3-201ENST00000364830 72 ntBASIC-1.54□□□□□ -2.66
COL4A1P02462 RNU6-800P-201ENST00000384473 103 ntBASIC-1.54□□□□□ -2.66
COL4A1P02462 SNORD78.1-201ENST00000390866 65 ntBASIC-1.55□□□□□ -2.66
COL4A1P02462 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.55□□□□□ -2.66
COL4A1P02462 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.55□□□□□ -2.66
COL4A1P02462 RNU6-776P-201ENST00000364403 104 ntBASIC-1.56□□□□□ -2.66
COL4A1P02462 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.56□□□□□ -2.66
COL4A1P02462 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.57□□□□□ -2.66
COL4A1P02462 RNU6-345P-201ENST00000517001 107 ntBASIC-1.57□□□□□ -2.66
COL4A1P02462 MIR4317-201ENST00000637586 65 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms