Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.53□□□□□ -2.65
NKX2-6A6NCS4 RNU6-828P-201ENST00000364876 107 ntBASIC-1.55□□□□□ -2.66
NKX2-6A6NCS4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.55□□□□□ -2.66
NKX2-6A6NCS4 RNY4-201ENST00000516507 96 ntBASIC-1.55□□□□□ -2.66
NKX2-6A6NCS4 MIR4511-201ENST00000582784 87 ntBASIC-1.55□□□□□ -2.66
NKX2-6A6NCS4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
NKX2-6A6NCS4 RNU6-539P-201ENST00000516665 103 ntBASIC-1.56□□□□□ -2.66
NKX2-6A6NCS4 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.57□□□□□ -2.66
NKX2-6A6NCS4 RNU6-520P-201ENST00000384717 104 ntBASIC-1.57□□□□□ -2.66
NKX2-6A6NCS4 SNORA40B-201ENST00000385573 128 ntBASIC-1.57□□□□□ -2.66
NKX2-6A6NCS4 SNORA40.16-201ENST00000517238 121 ntBASIC-1.57□□□□□ -2.66
NKX2-6A6NCS4 RNA5SP93-201ENST00000362525 114 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 RNA5SP405-201ENST00000363059 114 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 RNU6-800P-201ENST00000384473 103 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 MIR3139-201ENST00000579145 76 ntBASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
NKX2-6A6NCS4 RNU6-776P-201ENST00000364403 104 ntBASIC-1.59□□□□□ -2.66
NKX2-6A6NCS4 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.59□□□□□ -2.66
NKX2-6A6NCS4 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.59□□□□□ -2.66
NKX2-6A6NCS4 MIR1302-4-201ENST00000408701 150 ntBASIC-1.59□□□□□ -2.66
NKX2-6A6NCS4 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.59□□□□□ -2.66
NKX2-6A6NCS4 MIR466-201ENST00000580653 84 ntBASIC-1.6□□□□□ -2.67
NKX2-6A6NCS4 AC103706.3-201ENST00000636297 85 ntBASIC-1.6□□□□□ -2.67
NKX2-6A6NCS4 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.61□□□□□ -2.67
NKX2-6A6NCS4 MIR3123-201ENST00000583417 75 ntBASIC-1.61□□□□□ -2.67
NKX2-6A6NCS4 MIR202-201ENST00000362219 110 ntBASIC-1.62□□□□□ -2.67
NKX2-6A6NCS4 RNU6-940P-201ENST00000363433 104 ntBASIC-1.62□□□□□ -2.67
NKX2-6A6NCS4 RNU7-119P-201ENST00000459279 63 ntBASIC-1.62□□□□□ -2.67
NKX2-6A6NCS4 MIR4662A-201ENST00000637499 67 ntBASIC-1.62□□□□□ -2.67
NKX2-6A6NCS4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.63□□□□□ -2.67
NKX2-6A6NCS4 MIR3938-201ENST00000582157 103 ntBASIC-1.63□□□□□ -2.67
NKX2-6A6NCS4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.65□□□□□ -2.67
NKX2-6A6NCS4 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.65□□□□□ -2.67
NKX2-6A6NCS4 MT-TM-201ENST00000387377 68 ntBASIC-1.65□□□□□ -2.67
NKX2-6A6NCS4 RNU6-530P-201ENST00000391180 107 ntBASIC-1.65□□□□□ -2.67
NKX2-6A6NCS4 RNU6-194P-201ENST00000363862 105 ntBASIC-1.66□□□□□ -2.68
NKX2-6A6NCS4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.66□□□□□ -2.68
NKX2-6A6NCS4 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.66□□□□□ -2.68
NKX2-6A6NCS4 MIR581-201ENST00000384895 96 ntBASIC-1.67□□□□□ -2.68
NKX2-6A6NCS4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
NKX2-6A6NCS4 AC110620.1-201ENST00000416042 228 ntBASIC-1.69□□□□□ -2.68
NKX2-6A6NCS4 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.69□□□□□ -2.68
NKX2-6A6NCS4 SNORD60-201ENST00000383903 83 ntBASIC-1.7□□□□□ -2.68
NKX2-6A6NCS4 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.7□□□□□ -2.68
NKX2-6A6NCS4 MIR548AM-201ENST00000584298 74 ntBASIC-1.7□□□□□ -2.68
NKX2-6A6NCS4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.7□□□□□ -2.68
NKX2-6A6NCS4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.71□□□□□ -2.68
NKX2-6A6NCS4 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.71□□□□□ -2.68
NKX2-6A6NCS4 AL451105.1-201ENST00000450005 189 ntBASIC-1.71□□□□□ -2.68
NKX2-6A6NCS4 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.71□□□□□ -2.68
NKX2-6A6NCS4 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.72□□□□□ -2.68
NKX2-6A6NCS4 SNORD18C-201ENST00000362704 69 ntBASIC-1.73□□□□□ -2.69
NKX2-6A6NCS4 RNU4-88P-201ENST00000411220 86 ntBASIC-1.73□□□□□ -2.69
NKX2-6A6NCS4 RNU6-361P-201ENST00000364454 107 ntBASIC-1.74□□□□□ -2.69
NKX2-6A6NCS4 MIR548N-201ENST00000408742 75 ntBASIC-1.74□□□□□ -2.69
NKX2-6A6NCS4 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.75□□□□□ -2.69
NKX2-6A6NCS4 SNORD45.2-201ENST00000363552 72 ntBASIC-1.75□□□□□ -2.69
NKX2-6A6NCS4 snoU13.10-201ENST00000459301 103 ntBASIC-1.75□□□□□ -2.69
NKX2-6A6NCS4 AC114801.3-201ENST00000510231 177 ntBASIC-1.76□□□□□ -2.69
NKX2-6A6NCS4 MIR4426-201ENST00000640330 63 ntBASIC-1.76□□□□□ -2.69
NKX2-6A6NCS4 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.77□□□□□ -2.69
NKX2-6A6NCS4 RNU6-419P-201ENST00000517030 63 ntBASIC-1.77□□□□□ -2.69
NKX2-6A6NCS4 MIR548W-201ENST00000581970 74 ntBASIC-1.77□□□□□ -2.69
NKX2-6A6NCS4 MIR4748-201ENST00000578076 82 ntBASIC-1.78□□□□□ -2.69
NKX2-6A6NCS4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.78□□□□□ -2.69
NKX2-6A6NCS4 RNU6-471P-201ENST00000383944 106 ntBASIC-1.79□□□□□ -2.7
NKX2-6A6NCS4 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.81□□□□□ -2.7
NKX2-6A6NCS4 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.82□□□□□ -2.7
NKX2-6A6NCS4 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.82□□□□□ -2.7
NKX2-6A6NCS4 RNU6-742P-201ENST00000365289 107 ntBASIC-1.82□□□□□ -2.7
NKX2-6A6NCS4 RNU6-446P-201ENST00000362827 106 ntBASIC-1.83□□□□□ -2.7
NKX2-6A6NCS4 RNU6-300P-201ENST00000459080 104 ntBASIC-1.83□□□□□ -2.7
NKX2-6A6NCS4 RNU6-590P-201ENST00000365039 107 ntBASIC-1.86□□□□□ -2.71
NKX2-6A6NCS4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.86□□□□□ -2.71
NKX2-6A6NCS4 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.87□□□□□ -2.71
NKX2-6A6NCS4 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.88□□□□□ -2.71
NKX2-6A6NCS4 MIR548X-201ENST00000580069 75 ntBASIC-1.88□□□□□ -2.71
NKX2-6A6NCS4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.88□□□□□ -2.71
NKX2-6A6NCS4 RNU6-912P-201ENST00000363800 104 ntBASIC-1.89□□□□□ -2.71
NKX2-6A6NCS4 RNU6-68P-201ENST00000516576 104 ntBASIC-1.89□□□□□ -2.71
NKX2-6A6NCS4 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.91□□□□□ -2.72
NKX2-6A6NCS4 SNORD113-4-201ENST00000364802 75 ntBASIC-1.92□□□□□ -2.72
NKX2-6A6NCS4 MIR633-201ENST00000384821 98 ntBASIC-1.92□□□□□ -2.72
NKX2-6A6NCS4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
NKX2-6A6NCS4 FTX_4.1-201ENST00000616291 147 ntBASIC-1.92□□□□□ -2.72
NKX2-6A6NCS4 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.93□□□□□ -2.72
NKX2-6A6NCS4 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.93□□□□□ -2.72
NKX2-6A6NCS4 RNU6-176P-201ENST00000517196 105 ntBASIC-1.93□□□□□ -2.72
NKX2-6A6NCS4 MIR379-201ENST00000362218 67 ntBASIC-1.94□□□□□ -2.72
NKX2-6A6NCS4 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.94□□□□□ -2.72
NKX2-6A6NCS4 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.94□□□□□ -2.72
NKX2-6A6NCS4 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.94□□□□□ -2.72
NKX2-6A6NCS4 AC097484.2-201ENST00000509147 251 ntBASIC-1.95□□□□□ -2.72
NKX2-6A6NCS4 RNU6-230P-201ENST00000362457 104 ntBASIC-1.96□□□□□ -2.72
NKX2-6A6NCS4 RNY4P9-201ENST00000363194 97 ntBASIC-1.96□□□□□ -2.72
NKX2-6A6NCS4 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.96□□□□□ -2.72
NKX2-6A6NCS4 SNORA72.7-201ENST00000516349 94 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms