Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-530P-201ENST00000391180 107 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 RNU6-789P-201ENST00000517105 102 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.88□□□□□ -2.71
TREX1Q9NSU2 RNU6-554P-201ENST00000410466 106 ntBASIC-1.88□□□□□ -2.71
TREX1Q9NSU2 AP001318.4-201ENST00000616637 121 ntBASIC-1.88□□□□□ -2.71
TREX1Q9NSU2 MIR548BB-201ENST00000626714 66 ntBASIC-1.88□□□□□ -2.71
TREX1Q9NSU2 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.89□□□□□ -2.71
TREX1Q9NSU2 SNORD116-24-201ENST00000384549 92 ntBASIC-1.89□□□□□ -2.71
TREX1Q9NSU2 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.89□□□□□ -2.71
TREX1Q9NSU2 MIR7110-201ENST00000612638 86 ntBASIC-1.89□□□□□ -2.71
TREX1Q9NSU2 MIR664A-201ENST00000626086 82 ntBASIC-1.89□□□□□ -2.71
TREX1Q9NSU2 RNU6-230P-201ENST00000362457 104 ntBASIC-1.9□□□□□ -2.71
TREX1Q9NSU2 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.9□□□□□ -2.71
TREX1Q9NSU2 RNU6-810P-201ENST00000364001 107 ntBASIC-1.9□□□□□ -2.71
TREX1Q9NSU2 SNORD116-22-201ENST00000384430 92 ntBASIC-1.9□□□□□ -2.71
TREX1Q9NSU2 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.91□□□□□ -2.72
TREX1Q9NSU2 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.91□□□□□ -2.72
TREX1Q9NSU2 RNU6-267P-201ENST00000516714 103 ntBASIC-1.91□□□□□ -2.72
TREX1Q9NSU2 RNU6-92P-201ENST00000605893 104 ntBASIC-1.91□□□□□ -2.72
TREX1Q9NSU2 RNU6-380P-201ENST00000410207 107 ntBASIC-1.92□□□□□ -2.72
TREX1Q9NSU2 MIR548AI-201ENST00000579940 88 ntBASIC-1.92□□□□□ -2.72
TREX1Q9NSU2 RNA5SP93-201ENST00000362525 114 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 RNY4P7-201ENST00000364600 96 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 RNU6-542P-201ENST00000516405 103 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 RNU6-231P-201ENST00000517122 103 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 MIR4426-201ENST00000640330 63 ntBASIC-1.93□□□□□ -2.72
TREX1Q9NSU2 SNORD60.1-201ENST00000362451 73 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 RNU6-590P-201ENST00000365039 107 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 RNU6-907P-201ENST00000390924 102 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 RNU6-176P-201ENST00000517196 105 ntBASIC-1.94□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.95□□□□□ -2.72
TREX1Q9NSU2 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.95□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.95□□□□□ -2.72
TREX1Q9NSU2 AL731768.1-201ENST00000603124 139 ntBASIC-1.95□□□□□ -2.72
TREX1Q9NSU2 MIR2052-201ENST00000636055 55 ntBASIC-1.95□□□□□ -2.72
TREX1Q9NSU2 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 SNORA40B-201ENST00000385573 128 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 MIR1254-1-201ENST00000408257 97 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 RNU6-300P-201ENST00000459080 104 ntBASIC-1.96□□□□□ -2.72
TREX1Q9NSU2 RNU6-315P-201ENST00000362666 107 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 SNORD45.2-201ENST00000363552 72 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 SNORD116.2-201ENST00000391251 93 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 AL451105.1-201ENST00000450005 189 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 AC006160.2-201ENST00000637708 154 ntBASIC-1.97□□□□□ -2.72
TREX1Q9NSU2 RNY1P5-201ENST00000383890 115 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 SNORD116-14-201ENST00000383894 92 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 SNORD116-17-201ENST00000383929 92 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 SNORD116-15-201ENST00000384445 92 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 SNORD116-19-201ENST00000384729 92 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 RNU6-255P-201ENST00000516957 105 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 RNU6-345P-201ENST00000517001 107 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 MIR5693-201ENST00000577722 73 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.98□□□□□ -2.73
TREX1Q9NSU2 RNU6-895P-201ENST00000384125 103 ntBASIC-1.99□□□□□ -2.73
TREX1Q9NSU2 SNORA40.16-201ENST00000517238 121 ntBASIC-1.99□□□□□ -2.73
TREX1Q9NSU2 RNU6-675P-201ENST00000384236 104 ntBASIC-2□□□□□ -2.73
TREX1Q9NSU2 MIR154-201ENST00000385243 84 ntBASIC-2□□□□□ -2.73
TREX1Q9NSU2 RNY4P25-201ENST00000459254 96 ntBASIC-2□□□□□ -2.73
TREX1Q9NSU2 RNU6-1191P-201ENST00000516799 107 ntBASIC-2□□□□□ -2.73
TREX1Q9NSU2 MALAT1.1-201ENST00000618249 95 ntBASIC-2□□□□□ -2.73
TREX1Q9NSU2 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.01□□□□□ -2.73
TREX1Q9NSU2 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.01□□□□□ -2.73
TREX1Q9NSU2 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.02□□□□□ -2.73
TREX1Q9NSU2 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.02□□□□□ -2.73
TREX1Q9NSU2 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.03□□□□□ -2.73
TREX1Q9NSU2 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.03□□□□□ -2.73
TREX1Q9NSU2 RNU6-70P-201ENST00000516438 60 ntBASIC-2.03□□□□□ -2.73
TREX1Q9NSU2 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.04□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.04□□□□□ -2.74
TREX1Q9NSU2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.04□□□□□ -2.74
TREX1Q9NSU2 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.05□□□□□ -2.74
TREX1Q9NSU2 RNU6-800P-201ENST00000384473 103 ntBASIC-2.05□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.05□□□□□ -2.74
TREX1Q9NSU2 RNU6-742P-201ENST00000365289 107 ntBASIC-2.06□□□□□ -2.74
TREX1Q9NSU2 RNU6-122P-201ENST00000516818 107 ntBASIC-2.06□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.07□□□□□ -2.74
TREX1Q9NSU2 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.07□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.07□□□□□ -2.74
TREX1Q9NSU2 RNU7-119P-201ENST00000459279 63 ntBASIC-2.07□□□□□ -2.74
TREX1Q9NSU2 RNU6-589P-201ENST00000516485 107 ntBASIC-2.07□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.08□□□□□ -2.74
TREX1Q9NSU2 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.08□□□□□ -2.74
TREX1Q9NSU2 SNORA40.13-201ENST00000516379 120 ntBASIC-2.08□□□□□ -2.74
TREX1Q9NSU2 RNU6-687P-201ENST00000516443 89 ntBASIC-2.08□□□□□ -2.74
TREX1Q9NSU2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.09□□□□□ -2.74
TREX1Q9NSU2 RNU6-419P-201ENST00000517030 63 ntBASIC-2.09□□□□□ -2.74
TREX1Q9NSU2 RNU6-844P-201ENST00000517175 102 ntBASIC-2.09□□□□□ -2.74
TREX1Q9NSU2 SNORA25.5-201ENST00000363782 126 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms