Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.23□□□□□ -2.93
TREM1Q9NP99 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.23□□□□□ -2.93
TREM1Q9NP99 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.24□□□□□ -2.93
TREM1Q9NP99 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.24□□□□□ -2.93
TREM1Q9NP99 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.24□□□□□ -2.93
TREM1Q9NP99 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.24□□□□□ -2.93
TREM1Q9NP99 RNU6-789P-201ENST00000517105 102 ntBASIC-3.24□□□□□ -2.93
TREM1Q9NP99 SNORA63.4-201ENST00000362763 126 ntBASIC-3.25□□□□□ -2.93
TREM1Q9NP99 RNU6-810P-201ENST00000364001 107 ntBASIC-3.25□□□□□ -2.93
TREM1Q9NP99 MIR664A-201ENST00000626086 82 ntBASIC-3.25□□□□□ -2.93
TREM1Q9NP99 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.26□□□□□ -2.93
TREM1Q9NP99 RNU6-755P-201ENST00000364400 103 ntBASIC-3.26□□□□□ -2.93
TREM1Q9NP99 MIR1302-3-201ENST00000408128 138 ntBASIC-3.26□□□□□ -2.93
TREM1Q9NP99 MIR7110-201ENST00000612638 86 ntBASIC-3.26□□□□□ -2.93
TREM1Q9NP99 U6.95-201ENST00000636931 70 ntBASIC-3.26□□□□□ -2.93
TREM1Q9NP99 RNU6-737P-201ENST00000365370 107 ntBASIC-3.27□□□□□ -2.93
TREM1Q9NP99 MIR1297-201ENST00000637311 77 ntBASIC-3.27□□□□□ -2.93
TREM1Q9NP99 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.28□□□□□ -2.93
TREM1Q9NP99 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.28□□□□□ -2.93
TREM1Q9NP99 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.28□□□□□ -2.93
TREM1Q9NP99 MIR4426-201ENST00000640330 63 ntBASIC-3.28□□□□□ -2.93
TREM1Q9NP99 RNU6-590P-201ENST00000365039 107 ntBASIC-3.29□□□□□ -2.94
TREM1Q9NP99 MIR1302-5-201ENST00000408164 150 ntBASIC-3.29□□□□□ -2.94
TREM1Q9NP99 SNORA40-201ENST00000388090 126 ntBASIC-3.3□□□□□ -2.94
TREM1Q9NP99 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.3□□□□□ -2.94
TREM1Q9NP99 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.31□□□□□ -2.94
TREM1Q9NP99 SNORD116-21-201ENST00000384507 92 ntBASIC-3.31□□□□□ -2.94
TREM1Q9NP99 SNORA19-201ENST00000384737 128 ntBASIC-3.31□□□□□ -2.94
TREM1Q9NP99 AC004792.1-201ENST00000614523 137 ntBASIC-3.31□□□□□ -2.94
TREM1Q9NP99 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.31□□□□□ -2.94
TREM1Q9NP99 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 RNU6-497P-201ENST00000365316 104 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 SNORD116-24-201ENST00000384549 92 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 RNU6-257P-201ENST00000410238 98 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 MTND5P41-201ENST00000517498 206 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 MIR548BB-201ENST00000626714 66 ntBASIC-3.32□□□□□ -2.94
TREM1Q9NP99 SNORD116.2-201ENST00000391251 93 ntBASIC-3.33□□□□□ -2.94
TREM1Q9NP99 RNU6-300P-201ENST00000459080 104 ntBASIC-3.33□□□□□ -2.94
TREM1Q9NP99 RNU6-231P-201ENST00000517122 103 ntBASIC-3.33□□□□□ -2.94
TREM1Q9NP99 AC008737.2-201ENST00000599446 118 ntBASIC-3.33□□□□□ -2.94
TREM1Q9NP99 RNU6-92P-201ENST00000605893 104 ntBASIC-3.33□□□□□ -2.94
TREM1Q9NP99 RNU6-219P-201ENST00000364728 107 ntBASIC-3.34□□□□□ -2.94
TREM1Q9NP99 SNORD115-45-201ENST00000391078 81 ntBASIC-3.34□□□□□ -2.94
TREM1Q9NP99 MTCYBP9-201ENST00000431021 303 ntBASIC-3.34□□□□□ -2.94
TREM1Q9NP99 RNU6-267P-201ENST00000516714 103 ntBASIC-3.34□□□□□ -2.94
TREM1Q9NP99 RNU6-176P-201ENST00000517196 105 ntBASIC-3.34□□□□□ -2.94
TREM1Q9NP99 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.36□□□□□ -2.95
TREM1Q9NP99 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.36□□□□□ -2.95
TREM1Q9NP99 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.36□□□□□ -2.95
TREM1Q9NP99 MIR548AI-201ENST00000579940 88 ntBASIC-3.37□□□□□ -2.95
TREM1Q9NP99 SNORD60.1-201ENST00000362451 73 ntBASIC-3.38□□□□□ -2.95
TREM1Q9NP99 RNU6-665P-201ENST00000384639 107 ntBASIC-3.38□□□□□ -2.95
TREM1Q9NP99 SNORD116-22-201ENST00000384430 92 ntBASIC-3.39□□□□□ -2.95
TREM1Q9NP99 SNORA40B-201ENST00000385573 128 ntBASIC-3.39□□□□□ -2.95
TREM1Q9NP99 RNU6-854P-201ENST00000364036 107 ntBASIC-3.4□□□□□ -2.95
TREM1Q9NP99 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.4□□□□□ -2.95
TREM1Q9NP99 MIR568-201ENST00000385036 95 ntBASIC-3.4□□□□□ -2.95
TREM1Q9NP99 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 MIR606-201ENST00000384851 96 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 RNU6-380P-201ENST00000410207 107 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 RNU6-542P-201ENST00000516405 103 ntBASIC-3.41□□□□□ -2.96
TREM1Q9NP99 AL451105.1-201ENST00000450005 189 ntBASIC-3.42□□□□□ -2.96
TREM1Q9NP99 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.43□□□□□ -2.96
TREM1Q9NP99 SNORD45.2-201ENST00000363552 72 ntBASIC-3.43□□□□□ -2.96
TREM1Q9NP99 RNU6-895P-201ENST00000384125 103 ntBASIC-3.44□□□□□ -2.96
TREM1Q9NP99 MIR124-1-201ENST00000385275 85 ntBASIC-3.45□□□□□ -2.96
TREM1Q9NP99 SNORA40.16-201ENST00000517238 121 ntBASIC-3.45□□□□□ -2.96
TREM1Q9NP99 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.46□□□□□ -2.96
TREM1Q9NP99 RNU6-200P-201ENST00000364743 107 ntBASIC-3.47□□□□□ -2.96
TREM1Q9NP99 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.48□□□□□ -2.97
TREM1Q9NP99 SNORA63-201ENST00000363450 132 ntBASIC-3.48□□□□□ -2.97
TREM1Q9NP99 RNU6-196P-201ENST00000384315 107 ntBASIC-3.48□□□□□ -2.97
TREM1Q9NP99 MIR154-201ENST00000385243 84 ntBASIC-3.48□□□□□ -2.97
TREM1Q9NP99 MIR548AH-201ENST00000637109 76 ntBASIC-3.49□□□□□ -2.97
TREM1Q9NP99 RNU6-797P-201ENST00000363101 109 ntBASIC-3.5□□□□□ -2.97
TREM1Q9NP99 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.5□□□□□ -2.97
TREM1Q9NP99 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.5□□□□□ -2.97
TREM1Q9NP99 AC006160.2-201ENST00000637708 154 ntBASIC-3.5□□□□□ -2.97
TREM1Q9NP99 RNU6-822P-201ENST00000362707 106 ntBASIC-3.51□□□□□ -2.97
TREM1Q9NP99 RNU6-742P-201ENST00000365289 107 ntBASIC-3.51□□□□□ -2.97
TREM1Q9NP99 MIR656-201ENST00000385224 78 ntBASIC-3.51□□□□□ -2.97
TREM1Q9NP99 RNU6-907P-201ENST00000390924 102 ntBASIC-3.51□□□□□ -2.97
TREM1Q9NP99 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.51□□□□□ -2.97
TREM1Q9NP99 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.52□□□□□ -2.97
TREM1Q9NP99 RNU6-738P-201ENST00000384531 106 ntBASIC-3.53□□□□□ -2.97
TREM1Q9NP99 RNU6-70P-201ENST00000516438 60 ntBASIC-3.53□□□□□ -2.97
TREM1Q9NP99 MIR2052-201ENST00000636055 55 ntBASIC-3.53□□□□□ -2.97
TREM1Q9NP99 RNU6-315P-201ENST00000362666 107 ntBASIC-3.54□□□□□ -2.98
TREM1Q9NP99 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.54□□□□□ -2.98
TREM1Q9NP99 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.55□□□□□ -2.98
TREM1Q9NP99 RNU7-200P-201ENST00000516105 62 ntBASIC-3.56□□□□□ -2.98
TREM1Q9NP99 AL353621.2-201ENST00000605340 133 ntBASIC-3.56□□□□□ -2.98
TREM1Q9NP99 MALAT1.1-201ENST00000618249 95 ntBASIC-3.56□□□□□ -2.98
TREM1Q9NP99 AC139453.2-201ENST00000487255 133 ntBASIC-3.57□□□□□ -2.98
TREM1Q9NP99 AC062037.1-201ENST00000605302 128 ntBASIC-3.57□□□□□ -2.98
TREM1Q9NP99 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.58□□□□□ -2.98
TREM1Q9NP99 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.59□□□□□ -2.98
TREM1Q9NP99 SNORD116-14-201ENST00000383894 92 ntBASIC-3.6□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms