Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MIR154-201ENST00000385243 84 ntBASIC-6.02□□□□□ -3.37
LINC00643Q86TS7 MIR548AH-201ENST00000637109 76 ntBASIC-6.02□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.200-201ENST00000364018 102 ntBASIC-6.04□□□□□ -3.38
LINC00643Q86TS7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-6.04□□□□□ -3.38
LINC00643Q86TS7 MIR548BB-201ENST00000626714 66 ntBASIC-6.05□□□□□ -3.38
LINC00643Q86TS7 Y_RNA.520-201ENST00000384556 102 ntBASIC-6.06□□□□□ -3.38
LINC00643Q86TS7 SNORD115.2-201ENST00000391126 59 ntBASIC-6.06□□□□□ -3.38
LINC00643Q86TS7 Y_RNA.818-201ENST00000618813 71 ntBASIC-6.06□□□□□ -3.38
LINC00643Q86TS7 RNU6-836P-201ENST00000362920 107 ntBASIC-6.07□□□□□ -3.38
LINC00643Q86TS7 MIR569-201ENST00000385228 96 ntBASIC-6.07□□□□□ -3.38
LINC00643Q86TS7 MIR3914-2-201ENST00000637339 95 ntBASIC-6.07□□□□□ -3.38
LINC00643Q86TS7 Y_RNA.335-201ENST00000365299 96 ntBASIC-6.08□□□□□ -3.38
LINC00643Q86TS7 SNORD116-18-201ENST00000383961 92 ntBASIC-6.08□□□□□ -3.38
LINC00643Q86TS7 MIR1302-5-201ENST00000408164 150 ntBASIC-6.08□□□□□ -3.38
LINC00643Q86TS7 RNU6-109P-201ENST00000516364 107 ntBASIC-6.08□□□□□ -3.38
LINC00643Q86TS7 RNU6-184P-201ENST00000516514 107 ntBASIC-6.08□□□□□ -3.38
LINC00643Q86TS7 RNU6-122P-201ENST00000516818 107 ntBASIC-6.09□□□□□ -3.38
LINC00643Q86TS7 RNU6-497P-201ENST00000365316 104 ntBASIC-6.1□□□□□ -3.39
LINC00643Q86TS7 Y_RNA.580-201ENST00000391004 95 ntBASIC-6.1□□□□□ -3.39
LINC00643Q86TS7 RNU7-107P-201ENST00000459121 61 ntBASIC-6.1□□□□□ -3.39
LINC00643Q86TS7 RNU6-635P-201ENST00000516651 102 ntBASIC-6.1□□□□□ -3.39
LINC00643Q86TS7 SNORD116-22-201ENST00000384430 92 ntBASIC-6.11□□□□□ -3.39
LINC00643Q86TS7 RNU6-985P-201ENST00000410182 104 ntBASIC-6.12□□□□□ -3.39
LINC00643Q86TS7 MIR4317-201ENST00000637586 65 ntBASIC-6.12□□□□□ -3.39
LINC00643Q86TS7 RNU6-1137P-201ENST00000517073 99 ntBASIC-6.13□□□□□ -3.39
LINC00643Q86TS7 U6.95-201ENST00000636931 70 ntBASIC-6.13□□□□□ -3.39
LINC00643Q86TS7 RNU6-474P-201ENST00000384243 107 ntBASIC-6.14□□□□□ -3.39
LINC00643Q86TS7 Y_RNA.662-201ENST00000516028 97 ntBASIC-6.14□□□□□ -3.39
LINC00643Q86TS7 RNU6-1015P-201ENST00000517121 99 ntBASIC-6.14□□□□□ -3.39
LINC00643Q86TS7 RNU6-219P-201ENST00000364728 107 ntBASIC-6.15□□□□□ -3.39
LINC00643Q86TS7 Y_RNA.478-201ENST00000384358 107 ntBASIC-6.17□□□□□ -3.4
LINC00643Q86TS7 Y_RNA.611-201ENST00000410682 108 ntBASIC-6.17□□□□□ -3.4
LINC00643Q86TS7 Y_RNA.318-201ENST00000365131 97 ntBASIC-6.18□□□□□ -3.4
LINC00643Q86TS7 SNORA19-201ENST00000384737 128 ntBASIC-6.18□□□□□ -3.4
LINC00643Q86TS7 RNU6-70P-201ENST00000516438 60 ntBASIC-6.19□□□□□ -3.4
LINC00643Q86TS7 Y_RNA.712-201ENST00000517011 92 ntBASIC-6.19□□□□□ -3.4
LINC00643Q86TS7 SNORA25.5-201ENST00000363782 126 ntBASIC-6.21□□□□□ -3.4
LINC00643Q86TS7 RNU6-422P-201ENST00000384632 107 ntBASIC-6.21□□□□□ -3.4
LINC00643Q86TS7 MTND4LP9-201ENST00000427694 174 ntBASIC-6.21□□□□□ -3.4
LINC00643Q86TS7 RNU6-267P-201ENST00000516714 103 ntBASIC-6.21□□□□□ -3.4
LINC00643Q86TS7 Y_RNA.431-201ENST00000384086 102 ntBASIC-6.22□□□□□ -3.41
LINC00643Q86TS7 RNU6-315P-201ENST00000362666 107 ntBASIC-6.23□□□□□ -3.41
LINC00643Q86TS7 MIR4801-201ENST00000582704 82 ntBASIC-6.23□□□□□ -3.41
LINC00643Q86TS7 Y_RNA.356-201ENST00000365475 113 ntBASIC-6.25□□□□□ -3.41
LINC00643Q86TS7 SCARNA15.1-201ENST00000516384 125 ntBASIC-6.25□□□□□ -3.41
LINC00643Q86TS7 AC006160.2-201ENST00000637708 154 ntBASIC-6.25□□□□□ -3.41
LINC00643Q86TS7 SNORD116-21-201ENST00000384507 92 ntBASIC-6.26□□□□□ -3.41
LINC00643Q86TS7 RNU6-111P-201ENST00000517179 105 ntBASIC-6.26□□□□□ -3.41
LINC00643Q86TS7 RNU6-788P-201ENST00000390967 104 ntBASIC-6.27□□□□□ -3.41
LINC00643Q86TS7 RNU6-797P-201ENST00000363101 109 ntBASIC-6.28□□□□□ -3.41
LINC00643Q86TS7 RNU6-426P-201ENST00000516464 97 ntBASIC-6.28□□□□□ -3.41
LINC00643Q86TS7 Y_RNA.574-201ENST00000384766 95 ntBASIC-6.29□□□□□ -3.42
LINC00643Q86TS7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-6.32□□□□□ -3.42
LINC00643Q86TS7 AC004792.1-201ENST00000614523 137 ntBASIC-6.33□□□□□ -3.42
LINC00643Q86TS7 SNORA40-201ENST00000388090 126 ntBASIC-6.35□□□□□ -3.43
LINC00643Q86TS7 RNU6-394P-201ENST00000410735 107 ntBASIC-6.35□□□□□ -3.43
LINC00643Q86TS7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-6.35□□□□□ -3.43
LINC00643Q86TS7 MTATP8P1-201ENST00000467115 207 ntBASIC-6.35□□□□□ -3.43
LINC00643Q86TS7 MIR3128-201ENST00000581957 66 ntBASIC-6.36□□□□□ -3.43
LINC00643Q86TS7 MIR4795-201ENST00000584182 89 ntBASIC-6.36□□□□□ -3.43
LINC00643Q86TS7 MIR2052-201ENST00000636055 55 ntBASIC-6.36□□□□□ -3.43
LINC00643Q86TS7 Y_RNA.350-201ENST00000365409 98 ntBASIC-6.37□□□□□ -3.43
LINC00643Q86TS7 Y_RNA.216-201ENST00000364205 93 ntBASIC-6.39□□□□□ -3.43
LINC00643Q86TS7 RNU6-1255P-201ENST00000363434 112 ntBASIC-6.4□□□□□ -3.43
LINC00643Q86TS7 RNU6-776P-201ENST00000364403 104 ntBASIC-6.4□□□□□ -3.43
LINC00643Q86TS7 RNU6-1022P-201ENST00000365049 104 ntBASIC-6.4□□□□□ -3.43
LINC00643Q86TS7 RNU7-120P-201ENST00000459334 63 ntBASIC-6.4□□□□□ -3.43
LINC00643Q86TS7 RNU6-1023P-201ENST00000516137 106 ntBASIC-6.42□□□□□ -3.44
LINC00643Q86TS7 Y_RNA.722-201ENST00000517279 114 ntBASIC-6.42□□□□□ -3.44
LINC00643Q86TS7 AC134503.1-201ENST00000633048 54 ntBASIC-6.42□□□□□ -3.44
LINC00643Q86TS7 SNORA20.1-201ENST00000364790 130 ntBASIC-6.43□□□□□ -3.44
LINC00643Q86TS7 Y_RNA.297-201ENST00000364950 91 ntBASIC-6.43□□□□□ -3.44
LINC00643Q86TS7 Y_RNA.607-201ENST00000410597 98 ntBASIC-6.43□□□□□ -3.44
LINC00643Q86TS7 AL589823.1-201ENST00000429577 183 ntBASIC-6.43□□□□□ -3.44
LINC00643Q86TS7 RNU6-804P-201ENST00000384286 107 ntBASIC-6.45□□□□□ -3.44
LINC00643Q86TS7 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-6.45□□□□□ -3.44
LINC00643Q86TS7 RNU6-940P-201ENST00000363433 104 ntBASIC-6.46□□□□□ -3.44
LINC00643Q86TS7 RNU6-687P-201ENST00000516443 89 ntBASIC-6.46□□□□□ -3.44
LINC00643Q86TS7 MIR548X-201ENST00000580069 75 ntBASIC-6.47□□□□□ -3.45
LINC00643Q86TS7 MIR3938-201ENST00000582157 103 ntBASIC-6.48□□□□□ -3.45
LINC00643Q86TS7 MTND4P29-201ENST00000503122 1372 ntBASIC-6.48□□□□□ -3.45
LINC00643Q86TS7 MIR545-201ENST00000385085 106 ntBASIC-6.5□□□□□ -3.45
LINC00643Q86TS7 MIR3171-201ENST00000584270 74 ntBASIC-6.5□□□□□ -3.45
LINC00643Q86TS7 RNU6-979P-201ENST00000383896 107 ntBASIC-6.51□□□□□ -3.45
LINC00643Q86TS7 RNU6-257P-201ENST00000410238 98 ntBASIC-6.51□□□□□ -3.45
LINC00643Q86TS7 RNU6-875P-201ENST00000516488 106 ntBASIC-6.51□□□□□ -3.45
LINC00643Q86TS7 RNU6-411P-201ENST00000384451 107 ntBASIC-6.52□□□□□ -3.45
LINC00643Q86TS7 RNU6-675P-201ENST00000384236 104 ntBASIC-6.53□□□□□ -3.45
LINC00643Q86TS7 Y_RNA.273-201ENST00000364703 102 ntBASIC-6.54□□□□□ -3.46
LINC00643Q86TS7 MIR3134-201ENST00000579433 74 ntBASIC-6.54□□□□□ -3.46
LINC00643Q86TS7 MIR548H4-201ENST00000408689 111 ntBASIC-6.55□□□□□ -3.46
LINC00643Q86TS7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-6.55□□□□□ -3.46
LINC00643Q86TS7 Y_RNA.316-201ENST00000365118 111 ntBASIC-6.56□□□□□ -3.46
LINC00643Q86TS7 Y_RNA.709-201ENST00000516952 92 ntBASIC-6.56□□□□□ -3.46
LINC00643Q86TS7 RNU6-255P-201ENST00000516957 105 ntBASIC-6.56□□□□□ -3.46
LINC00643Q86TS7 Y_RNA.720-201ENST00000517166 92 ntBASIC-6.56□□□□□ -3.46
LINC00643Q86TS7 MALAT1.1-201ENST00000618249 95 ntBASIC-6.56□□□□□ -3.46
LINC00643Q86TS7 Y_RNA.460-201ENST00000384255 102 ntBASIC-6.57□□□□□ -3.46
LINC00643Q86TS7 SNORA25.4-201ENST00000363666 124 ntBASIC-6.58□□□□□ -3.46
LINC00643Q86TS7 Y_RNA.788-201ENST00000622394 112 ntBASIC-6.58□□□□□ -3.46
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms