Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC006160.2-201ENST00000637708 154 ntBASIC-1.47□□□□□ -2.64
HSPG2P98160 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.47□□□□□ -2.65
HSPG2P98160 MIR548X2-201ENST00000579776 100 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 SNORA19-201ENST00000384737 128 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR1302-1-201ENST00000637932 143 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR1302-5-201ENST00000408164 150 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR664A-201ENST00000626086 82 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 RNU6-635P-201ENST00000516651 102 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 MIR3914-2-201ENST00000637339 95 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 MIR4680-201ENST00000580906 66 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 AC134503.1-201ENST00000633048 54 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 SNORD116-18-201ENST00000383961 92 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 SNORA25.5-201ENST00000363782 126 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MIR590-201ENST00000385008 97 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-788P-201ENST00000390967 104 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MTND4LP9-201ENST00000427694 174 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MIR124-1-201ENST00000385275 85 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-394P-201ENST00000410735 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-109P-201ENST00000516364 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-184P-201ENST00000516514 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-836P-201ENST00000362920 107 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU6-497P-201ENST00000365316 104 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 AC022559.1-201ENST00000520905 205 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 SNORD116-21-201ENST00000384507 92 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU6-895P-201ENST00000384125 103 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU7-107P-201ENST00000459121 61 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-916P-201ENST00000516088 109 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-315P-201ENST00000362666 107 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-797P-201ENST00000363101 109 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 MIR548X-201ENST00000580069 75 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 MIR4801-201ENST00000582704 82 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 SNORD45C-201ENST00000383893 79 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 RNU6-122P-201ENST00000516818 107 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 MT-TD-201ENST00000387419 68 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR548AL-201ENST00000578416 97 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-623P-201ENST00000363143 105 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-426P-201ENST00000516464 97 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-219P-201ENST00000364728 107 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 SNORD33.1-201ENST00000516213 88 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR3128-201ENST00000581957 66 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR4484-201ENST00000582855 83 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-474P-201ENST00000384243 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 SNORD115.2-201ENST00000391126 59 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 MIR548F1-201ENST00000408667 84 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA40.13-201ENST00000516379 120 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 RNU6-411P-201ENST00000384451 107 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA20.1-201ENST00000364790 130 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 RNU6-675P-201ENST00000384236 104 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 MIR545-201ENST00000385085 106 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 AC141273.2-201ENST00000618989 130 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA40-201ENST00000388090 126 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 RNU6-804P-201ENST00000384286 107 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.57□□□□□ -2.66
HSPG2P98160 MIR548H4-201ENST00000408689 111 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 RNU6-255P-201ENST00000516957 105 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 AL353621.2-201ENST00000605340 133 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 MIR548BB-201ENST00000626714 66 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU6-634P-201ENST00000459134 106 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU7-120P-201ENST00000459334 63 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MTND3P3-201ENST00000505004 126 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR548AH-201ENST00000637109 76 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR3171-201ENST00000584270 74 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 AL031737.1-201ENST00000450125 223 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR3938-201ENST00000582157 103 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU6-663P-201ENST00000391105 106 ntBASIC-1.6□□□□□ -2.67
HSPG2P98160 RNU6-687P-201ENST00000516443 89 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms