Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-231P-201ENST00000517122 103 ntBASIC-0.83□□□□□ -2.54
HOXC8P31273 RNU6-471P-201ENST00000383944 106 ntBASIC-0.84□□□□□ -2.54
HOXC8P31273 MIR3170-201ENST00000582699 77 ntBASIC-0.84□□□□□ -2.54
HOXC8P31273 MIR6818-201ENST00000621576 65 ntBASIC-0.84□□□□□ -2.54
HOXC8P31273 RNA5SP26-201ENST00000362406 119 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 SNORD116.2-201ENST00000391251 93 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 AC110620.1-201ENST00000416042 228 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 MIR466-201ENST00000580653 84 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 MIR7110-201ENST00000612638 86 ntBASIC-0.85□□□□□ -2.55
HOXC8P31273 MIR520D-201ENST00000385002 87 ntBASIC-0.86□□□□□ -2.55
HOXC8P31273 RNA5SP266-201ENST00000410273 108 ntBASIC-0.86□□□□□ -2.55
HOXC8P31273 RNU6-247P-201ENST00000362636 107 ntBASIC-0.87□□□□□ -2.55
HOXC8P31273 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.87□□□□□ -2.55
HOXC8P31273 MIR7978-201ENST00000636158 59 ntBASIC-0.87□□□□□ -2.55
HOXC8P31273 RNU7-134P-201ENST00000458997 64 ntBASIC-0.88□□□□□ -2.55
HOXC8P31273 AL627230.5-201ENST00000619807 58 ntBASIC-0.88□□□□□ -2.55
HOXC8P31273 RNU6-810P-201ENST00000364001 107 ntBASIC-0.89□□□□□ -2.55
HOXC8P31273 MIR4320-201ENST00000636981 65 ntBASIC-0.9□□□□□ -2.55
HOXC8P31273 RNU6-608P-201ENST00000383927 104 ntBASIC-0.91□□□□□ -2.56
HOXC8P31273 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.91□□□□□ -2.56
HOXC8P31273 MIR3938-201ENST00000582157 103 ntBASIC-0.91□□□□□ -2.56
HOXC8P31273 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.92□□□□□ -2.56
HOXC8P31273 RNU6-576P-201ENST00000390854 102 ntBASIC-0.92□□□□□ -2.56
HOXC8P31273 AC090616.4-201ENST00000448026 115 ntBASIC-0.92□□□□□ -2.56
HOXC8P31273 RNU7-119P-201ENST00000459279 63 ntBASIC-0.92□□□□□ -2.56
HOXC8P31273 RNU6-669P-201ENST00000365575 107 ntBASIC-0.93□□□□□ -2.56
HOXC8P31273 MIR125B1-201ENST00000385236 88 ntBASIC-0.93□□□□□ -2.56
HOXC8P31273 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.93□□□□□ -2.56
HOXC8P31273 SNORD63.2-201ENST00000516303 64 ntBASIC-0.93□□□□□ -2.56
HOXC8P31273 RNU6-164P-201ENST00000364604 103 ntBASIC-0.94□□□□□ -2.56
HOXC8P31273 RNU6-590P-201ENST00000365039 107 ntBASIC-0.94□□□□□ -2.56
HOXC8P31273 RNU7-160P-201ENST00000516660 62 ntBASIC-0.94□□□□□ -2.56
HOXC8P31273 MIR378F-201ENST00000578143 78 ntBASIC-0.94□□□□□ -2.56
HOXC8P31273 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.94□□□□□ -2.56
HOXC8P31273 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.95□□□□□ -2.56
HOXC8P31273 SNORA40B-201ENST00000385573 128 ntBASIC-0.95□□□□□ -2.56
HOXC8P31273 RNU6-258P-201ENST00000390884 101 ntBASIC-0.95□□□□□ -2.56
HOXC8P31273 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.95□□□□□ -2.56
HOXC8P31273 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.96□□□□□ -2.56
HOXC8P31273 SNX3P1X-201ENST00000414887 175 ntBASIC-0.96□□□□□ -2.56
HOXC8P31273 AC125388.1-201ENST00000459631 156 ntBASIC-0.96□□□□□ -2.56
HOXC8P31273 SNORA40.16-201ENST00000517238 121 ntBASIC-0.96□□□□□ -2.56
HOXC8P31273 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.97□□□□□ -2.56
HOXC8P31273 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HOXC8P31273 MIR3115-201ENST00000577915 68 ntBASIC-0.97□□□□□ -2.56
HOXC8P31273 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.98□□□□□ -2.57
HOXC8P31273 RNA5SP331-201ENST00000364986 107 ntBASIC-0.98□□□□□ -2.57
HOXC8P31273 RNU6-974P-201ENST00000384099 108 ntBASIC-0.98□□□□□ -2.57
HOXC8P31273 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.99□□□□□ -2.57
HOXC8P31273 RNU6-520P-201ENST00000384717 104 ntBASIC-0.99□□□□□ -2.57
HOXC8P31273 MIR4306-201ENST00000583390 91 ntBASIC-0.99□□□□□ -2.57
HOXC8P31273 AC091912.2-201ENST00000624798 167 ntBASIC-0.99□□□□□ -2.57
HOXC8P31273 RNU6-828P-201ENST00000364876 107 ntBASIC-1□□□□□ -2.57
HOXC8P31273 MIR3165-201ENST00000579874 75 ntBASIC-1□□□□□ -2.57
HOXC8P31273 MIR6874-201ENST00000635894 71 ntBASIC-1□□□□□ -2.57
HOXC8P31273 MIR8485-201ENST00000401372 91 ntBASIC-1.02□□□□□ -2.57
HOXC8P31273 AC018880.2-201ENST00000414265 201 ntBASIC-1.02□□□□□ -2.57
HOXC8P31273 AC139453.2-201ENST00000487255 133 ntBASIC-1.02□□□□□ -2.57
HOXC8P31273 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.02□□□□□ -2.57
HOXC8P31273 RNA5SP461-201ENST00000516451 104 ntBASIC-1.02□□□□□ -2.57
HOXC8P31273 SNORA27.2-201ENST00000363365 126 ntBASIC-1.03□□□□□ -2.57
HOXC8P31273 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.04□□□□□ -2.58
HOXC8P31273 MIR23C-201ENST00000579846 100 ntBASIC-1.04□□□□□ -2.58
HOXC8P31273 MIR1468-201ENST00000410600 86 ntBASIC-1.05□□□□□ -2.58
HOXC8P31273 MIR601-201ENST00000385256 79 ntBASIC-1.06□□□□□ -2.58
HOXC8P31273 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
HOXC8P31273 RNU6-79P-201ENST00000362511 107 ntBASIC-1.07□□□□□ -2.58
HOXC8P31273 RNU6-446P-201ENST00000362827 106 ntBASIC-1.08□□□□□ -2.58
HOXC8P31273 MIR633-201ENST00000384821 98 ntBASIC-1.08□□□□□ -2.58
HOXC8P31273 AC138207.3-201ENST00000585289 166 ntBASIC-1.08□□□□□ -2.58
HOXC8P31273 MIR6502-201ENST00000617296 76 ntBASIC-1.08□□□□□ -2.58
HOXC8P31273 RNU6-706P-201ENST00000517229 104 ntBASIC-1.09□□□□□ -2.58
HOXC8P31273 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.09□□□□□ -2.58
HOXC8P31273 MIR198-201ENST00000637333 62 ntBASIC-1.09□□□□□ -2.58
HOXC8P31273 RNU6-400P-201ENST00000391173 106 ntBASIC-1.1□□□□□ -2.59
HOXC8P31273 AC120024.2-201ENST00000576526 175 ntBASIC-1.1□□□□□ -2.59
HOXC8P31273 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.1□□□□□ -2.59
HOXC8P31273 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.12□□□□□ -2.59
HOXC8P31273 RNU6-563P-201ENST00000364872 108 ntBASIC-1.12□□□□□ -2.59
HOXC8P31273 RNY3P8-201ENST00000411366 126 ntBASIC-1.12□□□□□ -2.59
HOXC8P31273 RNA5SP180-201ENST00000516181 101 ntBASIC-1.13□□□□□ -2.59
HOXC8P31273 RNU6-829P-201ENST00000363700 112 ntBASIC-1.14□□□□□ -2.59
HOXC8P31273 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.14□□□□□ -2.59
HOXC8P31273 AL451105.1-201ENST00000450005 189 ntBASIC-1.14□□□□□ -2.59
HOXC8P31273 RNU6-419P-201ENST00000517030 63 ntBASIC-1.14□□□□□ -2.59
HOXC8P31273 MIR4520-1-201ENST00000582609 70 ntBASIC-1.14□□□□□ -2.59
HOXC8P31273 U4.2-201ENST00000618561 85 ntBASIC-1.15□□□□□ -2.59
HOXC8P31273 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.15□□□□□ -2.59
HOXC8P31273 MIR1285-2-201ENST00000408311 88 ntBASIC-1.16□□□□□ -2.6
HOXC8P31273 SNORD45.2-201ENST00000363552 72 ntBASIC-1.17□□□□□ -2.6
HOXC8P31273 RNU6-530P-201ENST00000391180 107 ntBASIC-1.17□□□□□ -2.6
HOXC8P31273 MIR5591-201ENST00000578248 65 ntBASIC-1.17□□□□□ -2.6
HOXC8P31273 MIR365A-201ENST00000362260 87 ntBASIC-1.18□□□□□ -2.6
HOXC8P31273 SNORD113-4-201ENST00000364802 75 ntBASIC-1.18□□□□□ -2.6
HOXC8P31273 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
HOXC8P31273 MIR4770-201ENST00000579149 58 ntBASIC-1.18□□□□□ -2.6
HOXC8P31273 AC013734.1-201ENST00000619329 111 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms