Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SNORD19-201ENST00000391191 68 ntBASIC-0.83□□□□□ -2.54
PRPF40AO75400 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.83□□□□□ -2.54
PRPF40AO75400 RNU6-810P-201ENST00000364001 107 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 AP002795.1-201ENST00000534879 84 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 AL627230.5-201ENST00000619807 58 ntBASIC-0.84□□□□□ -2.54
PRPF40AO75400 MIR633-201ENST00000384821 98 ntBASIC-0.85□□□□□ -2.55
PRPF40AO75400 MIR6738-201ENST00000619620 64 ntBASIC-0.85□□□□□ -2.55
PRPF40AO75400 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 MIR5683-201ENST00000636514 76 ntBASIC-0.86□□□□□ -2.55
PRPF40AO75400 RNA5SP331-201ENST00000364986 107 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 RNU6-10P-201ENST00000384036 107 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 SNORA40B-201ENST00000385573 128 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 RNU7-160P-201ENST00000516660 62 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR4324-201ENST00000584846 72 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
PRPF40AO75400 MIR196A1-201ENST00000388006 70 ntBASIC-0.88□□□□□ -2.55
PRPF40AO75400 MIR4490-201ENST00000582647 84 ntBASIC-0.88□□□□□ -2.55
PRPF40AO75400 RNU6-247P-201ENST00000362636 107 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 MIR7978-201ENST00000636158 59 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 MIR4320-201ENST00000636981 65 ntBASIC-0.89□□□□□ -2.55
PRPF40AO75400 SNORA40.16-201ENST00000517238 121 ntBASIC-0.91□□□□□ -2.56
PRPF40AO75400 MIR3170-201ENST00000582699 77 ntBASIC-0.91□□□□□ -2.56
PRPF40AO75400 RNU6-499P-201ENST00000365615 107 ntBASIC-0.92□□□□□ -2.56
PRPF40AO75400 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.94□□□□□ -2.56
PRPF40AO75400 SNX3P1X-201ENST00000414887 175 ntBASIC-0.95□□□□□ -2.56
PRPF40AO75400 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.95□□□□□ -2.56
PRPF40AO75400 MIR507-201ENST00000385234 94 ntBASIC-0.96□□□□□ -2.56
PRPF40AO75400 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
PRPF40AO75400 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 RNU6-829P-201ENST00000363700 112 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 snoU83B.1-201ENST00000517136 88 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
PRPF40AO75400 RNU6-446P-201ENST00000362827 106 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 MIR125B1-201ENST00000385236 88 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 AC079150.2-201ENST00000443733 78 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RNU7-134P-201ENST00000458997 64 ntBASIC-0.98□□□□□ -2.57
PRPF40AO75400 RNA5SP26-201ENST00000362406 119 ntBASIC-0.99□□□□□ -2.57
PRPF40AO75400 RNU6-828P-201ENST00000364876 107 ntBASIC-0.99□□□□□ -2.57
PRPF40AO75400 RNU6-1157P-201ENST00000384456 106 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 MIR1468-201ENST00000410600 86 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 SNORD63.2-201ENST00000516303 64 ntBASIC-1□□□□□ -2.57
PRPF40AO75400 MIR520D-201ENST00000385002 87 ntBASIC-1.02□□□□□ -2.57
PRPF40AO75400 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 MIR3115-201ENST00000577915 68 ntBASIC-1.03□□□□□ -2.57
PRPF40AO75400 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR601-201ENST00000385256 79 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 MIR198-201ENST00000637333 62 ntBASIC-1.04□□□□□ -2.58
PRPF40AO75400 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.06□□□□□ -2.58
PRPF40AO75400 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
PRPF40AO75400 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
PRPF40AO75400 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.08□□□□□ -2.58
PRPF40AO75400 RNU6-608P-201ENST00000383927 104 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 AC090616.4-201ENST00000448026 115 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 RNA5SP461-201ENST00000516451 104 ntBASIC-1.09□□□□□ -2.58
PRPF40AO75400 RNU6-258P-201ENST00000390884 101 ntBASIC-1.13□□□□□ -2.59
PRPF40AO75400 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.13□□□□□ -2.59
PRPF40AO75400 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.13□□□□□ -2.59
PRPF40AO75400 U4.2-201ENST00000618561 85 ntBASIC-1.14□□□□□ -2.59
PRPF40AO75400 SNORA27.2-201ENST00000363365 126 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 SNORD113-4-201ENST00000364802 75 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
PRPF40AO75400 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 MIR8485-201ENST00000401372 91 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.16□□□□□ -2.6
PRPF40AO75400 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.17□□□□□ -2.6
PRPF40AO75400 MIR4306-201ENST00000583390 91 ntBASIC-1.17□□□□□ -2.6
PRPF40AO75400 SNORD45.2-201ENST00000363552 72 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-164P-201ENST00000364604 103 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-576P-201ENST00000390854 102 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 AC091912.2-201ENST00000624798 167 ntBASIC-1.18□□□□□ -2.6
PRPF40AO75400 RNU6-419P-201ENST00000517030 63 ntBASIC-1.19□□□□□ -2.6
PRPF40AO75400 RNU6-614P-201ENST00000384369 107 ntBASIC-1.2□□□□□ -2.6
PRPF40AO75400 U6.59-201ENST00000615686 107 ntBASIC-1.2□□□□□ -2.6
PRPF40AO75400 MIR365A-201ENST00000362260 87 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 MIR548X-201ENST00000580069 75 ntBASIC-1.21□□□□□ -2.6
PRPF40AO75400 AL451105.1-201ENST00000450005 189 ntBASIC-1.22□□□□□ -2.6
PRPF40AO75400 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
PRPF40AO75400 MIR23C-201ENST00000579846 100 ntBASIC-1.23□□□□□ -2.61
PRPF40AO75400 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.24□□□□□ -2.61
PRPF40AO75400 MIR4441-201ENST00000582623 100 ntBASIC-1.24□□□□□ -2.61
PRPF40AO75400 MTND4LP19-201ENST00000403051 166 ntBASIC-1.26□□□□□ -2.61
PRPF40AO75400 AC018880.2-201ENST00000414265 201 ntBASIC-1.26□□□□□ -2.61
PRPF40AO75400 RNU6-563P-201ENST00000364872 108 ntBASIC-1.27□□□□□ -2.61
PRPF40AO75400 RNU6-706P-201ENST00000517229 104 ntBASIC-1.27□□□□□ -2.61
PRPF40AO75400 SNORD114-3-201ENST00000364969 75 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms