Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.2□□□□□ -2.76
SHOX2O60902 SNORD45.2-201ENST00000363552 72 ntBASIC-2.2□□□□□ -2.76
SHOX2O60902 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 SNORD113.1-201ENST00000363280 73 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 SNORA8.1-201ENST00000384250 140 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 MIR7110-201ENST00000612638 86 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 MIR548AH-201ENST00000637109 76 ntBASIC-2.21□□□□□ -2.76
SHOX2O60902 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.22□□□□□ -2.76
SHOX2O60902 MIR656-201ENST00000385224 78 ntBASIC-2.22□□□□□ -2.76
SHOX2O60902 RNA5SP449-201ENST00000516871 130 ntBASIC-2.22□□□□□ -2.76
SHOX2O60902 MTND5P41-201ENST00000517498 206 ntBASIC-2.22□□□□□ -2.76
SHOX2O60902 MIR8053-201ENST00000613344 75 ntBASIC-2.22□□□□□ -2.76
SHOX2O60902 RNU6-200P-201ENST00000364743 107 ntBASIC-2.23□□□□□ -2.77
SHOX2O60902 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.23□□□□□ -2.77
SHOX2O60902 MIR519C-201ENST00000385053 87 ntBASIC-2.23□□□□□ -2.77
SHOX2O60902 RNU6-810P-201ENST00000364001 107 ntBASIC-2.24□□□□□ -2.77
SHOX2O60902 MIR124-1-201ENST00000385275 85 ntBASIC-2.24□□□□□ -2.77
SHOX2O60902 SNORA40B-201ENST00000385573 128 ntBASIC-2.24□□□□□ -2.77
SHOX2O60902 SNORA40-201ENST00000388090 126 ntBASIC-2.24□□□□□ -2.77
SHOX2O60902 AC004792.1-201ENST00000614523 137 ntBASIC-2.24□□□□□ -2.77
SHOX2O60902 SNORA63-201ENST00000363450 132 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 RNU6-755P-201ENST00000364400 103 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 RNU6-257P-201ENST00000410238 98 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 RNU6-162P-201ENST00000516228 103 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 U7.3-201ENST00000616123 62 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 U6.95-201ENST00000636931 70 ntBASIC-2.25□□□□□ -2.77
SHOX2O60902 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 RNU6-497P-201ENST00000365316 104 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 MIR590-201ENST00000385008 97 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 RNU6-789P-201ENST00000517105 102 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 RNU6-231P-201ENST00000517122 103 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 MIR548AI-201ENST00000579940 88 ntBASIC-2.26□□□□□ -2.77
SHOX2O60902 RNU6-633P-201ENST00000362612 103 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 RNU6-686P-201ENST00000364839 107 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 RNA5SP224-201ENST00000365069 126 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 RNU6-742P-201ENST00000365289 107 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 MIR1297-201ENST00000637311 77 ntBASIC-2.27□□□□□ -2.77
SHOX2O60902 RNU6-797P-201ENST00000363101 109 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 SNORD116-24-201ENST00000384549 92 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 SNORA40.16-201ENST00000517238 121 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 MIR4503-201ENST00000582187 83 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 RNU6-92P-201ENST00000605893 104 ntBASIC-2.28□□□□□ -2.77
SHOX2O60902 SNORA63.4-201ENST00000362763 126 ntBASIC-2.29□□□□□ -2.78
SHOX2O60902 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.29□□□□□ -2.78
SHOX2O60902 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.29□□□□□ -2.78
SHOX2O60902 SNORD60.1-201ENST00000362451 73 ntBASIC-2.3□□□□□ -2.78
SHOX2O60902 RNU6-822P-201ENST00000362707 106 ntBASIC-2.3□□□□□ -2.78
SHOX2O60902 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.3□□□□□ -2.78
SHOX2O60902 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 AC139453.2-201ENST00000487255 133 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 AC093729.1-201ENST00000513074 128 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 RNU6-659P-201ENST00000516454 104 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 MIR4668-201ENST00000582284 70 ntBASIC-2.31□□□□□ -2.78
SHOX2O60902 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.32□□□□□ -2.78
SHOX2O60902 RNU6-542P-201ENST00000516405 103 ntBASIC-2.32□□□□□ -2.78
SHOX2O60902 RNU6-419P-201ENST00000517030 63 ntBASIC-2.32□□□□□ -2.78
SHOX2O60902 AC062037.1-201ENST00000605302 128 ntBASIC-2.32□□□□□ -2.78
SHOX2O60902 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.33□□□□□ -2.78
SHOX2O60902 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.33□□□□□ -2.78
SHOX2O60902 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.33□□□□□ -2.78
SHOX2O60902 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.33□□□□□ -2.78
SHOX2O60902 RNU6-109P-201ENST00000516364 107 ntBASIC-2.34□□□□□ -2.78
SHOX2O60902 RNU6-184P-201ENST00000516514 107 ntBASIC-2.34□□□□□ -2.78
SHOX2O60902 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.34□□□□□ -2.78
SHOX2O60902 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.34□□□□□ -2.78
SHOX2O60902 SNORD116-21-201ENST00000384507 92 ntBASIC-2.35□□□□□ -2.79
SHOX2O60902 SNORD45A-201ENST00000384512 84 ntBASIC-2.35□□□□□ -2.79
SHOX2O60902 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.35□□□□□ -2.79
SHOX2O60902 AL353621.2-201ENST00000605340 133 ntBASIC-2.35□□□□□ -2.79
SHOX2O60902 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.36□□□□□ -2.79
SHOX2O60902 SNORD45C-201ENST00000383893 79 ntBASIC-2.36□□□□□ -2.79
SHOX2O60902 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
SHOX2O60902 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.36□□□□□ -2.79
SHOX2O60902 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.36□□□□□ -2.79
SHOX2O60902 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 MIR363-201ENST00000384840 75 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 MIR1302-5-201ENST00000408164 150 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.37□□□□□ -2.79
SHOX2O60902 RNU6-379P-201ENST00000363813 104 ntBASIC-2.38□□□□□ -2.79
SHOX2O60902 RNU6-196P-201ENST00000384315 107 ntBASIC-2.38□□□□□ -2.79
SHOX2O60902 RNU7-200P-201ENST00000516105 62 ntBASIC-2.38□□□□□ -2.79
SHOX2O60902 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 SNORD116.2-201ENST00000391251 93 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 RNU6-122P-201ENST00000516818 107 ntBASIC-2.39□□□□□ -2.79
SHOX2O60902 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.4□□□□□ -2.79
SHOX2O60902 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.4□□□□□ -2.79
SHOX2O60902 RNU7-119P-201ENST00000459279 63 ntBASIC-2.4□□□□□ -2.79
SHOX2O60902 RNU6-836P-201ENST00000362920 107 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms