Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 MIR3171-201ENST00000584270 74 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 U6.95-201ENST00000636931 70 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 SNORD58C-201ENST00000365223 64 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 SNORA40-201ENST00000388090 126 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 MIR3128-201ENST00000581957 66 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 MIR4760-201ENST00000585040 80 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 MIR4317-201ENST00000637586 65 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 AL157777.2-201ENST00000258070 137 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 AP001318.4-201ENST00000616637 121 ntBASIC-1.43□□□□□ -2.64
CACNA1AO00555 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 RNU6-267P-201ENST00000516714 103 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 AL359920.1-201ENST00000618332 176 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 SNORD115.2-201ENST00000391126 59 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 MIR1302-1-201ENST00000637932 143 ntBASIC-1.44□□□□□ -2.64
CACNA1AO00555 SNORD116-22-201ENST00000384430 92 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 MIR548X2-201ENST00000579776 100 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 SNORD116-18-201ENST00000383961 92 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 SNORD116-21-201ENST00000384507 92 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 RNU6-231P-201ENST00000517122 103 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 SNORA40.16-201ENST00000517238 121 ntBASIC-1.45□□□□□ -2.64
CACNA1AO00555 RNA5SP224-201ENST00000365069 126 ntBASIC-1.46□□□□□ -2.64
CACNA1AO00555 MTND4LP9-201ENST00000427694 174 ntBASIC-1.46□□□□□ -2.64
CACNA1AO00555 SNORA40.13-201ENST00000516379 120 ntBASIC-1.46□□□□□ -2.64
CACNA1AO00555 MTND4P29-201ENST00000503122 1372 ntBASIC-1.47□□□□□ -2.64
CACNA1AO00555 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.47□□□□□ -2.64
CACNA1AO00555 AC139453.2-201ENST00000487255 133 ntBASIC-1.47□□□□□ -2.64
CACNA1AO00555 AL353621.2-201ENST00000605340 133 ntBASIC-1.47□□□□□ -2.64
CACNA1AO00555 MIR590-201ENST00000385008 97 ntBASIC-1.47□□□□□ -2.65
CACNA1AO00555 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.65
CACNA1AO00555 RNU6-394P-201ENST00000410735 107 ntBASIC-1.47□□□□□ -2.65
CACNA1AO00555 RNU6-315P-201ENST00000362666 107 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 AC141273.2-201ENST00000618989 130 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 RNU6-663P-201ENST00000391105 106 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 AC026407.1-201ENST00000518369 204 ntBASIC-1.48□□□□□ -2.65
CACNA1AO00555 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.49□□□□□ -2.65
CACNA1AO00555 RNU6-497P-201ENST00000365316 104 ntBASIC-1.49□□□□□ -2.65
CACNA1AO00555 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.49□□□□□ -2.65
CACNA1AO00555 MIR548H4-201ENST00000408689 111 ntBASIC-1.49□□□□□ -2.65
CACNA1AO00555 RNU6-380P-201ENST00000410207 107 ntBASIC-1.49□□□□□ -2.65
CACNA1AO00555 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.5□□□□□ -2.65
CACNA1AO00555 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 MIR656-201ENST00000385224 78 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 MIR569-201ENST00000385228 96 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 SNORD115-45-201ENST00000391078 81 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 MIR4795-201ENST00000584182 89 ntBASIC-1.51□□□□□ -2.65
CACNA1AO00555 RNU6-797P-201ENST00000363101 109 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 SNORA20.1-201ENST00000364790 130 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 AL451105.1-201ENST00000450005 189 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 AL031737.1-201ENST00000450125 223 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 RNU6-109P-201ENST00000516364 107 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 RNU6-184P-201ENST00000516514 107 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 RNU6-804P-201ENST00000384286 107 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 RNU6-411P-201ENST00000384451 107 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 SNORD116-24-201ENST00000384549 92 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 MIR1302-5-201ENST00000408164 150 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 AP000770.2-201ENST00000623694 100 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 MIR3914-2-201ENST00000637339 95 ntBASIC-1.52□□□□□ -2.65
CACNA1AO00555 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.53□□□□□ -2.65
CACNA1AO00555 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.53□□□□□ -2.65
CACNA1AO00555 MIR124-1-201ENST00000385275 85 ntBASIC-1.53□□□□□ -2.65
CACNA1AO00555 MIR548X-201ENST00000580069 75 ntBASIC-1.54□□□□□ -2.66
CACNA1AO00555 AC004792.1-201ENST00000614523 137 ntBASIC-1.54□□□□□ -2.66
CACNA1AO00555 MTATP8P1-201ENST00000467115 207 ntBASIC-1.54□□□□□ -2.66
CACNA1AO00555 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 RNU6-419P-201ENST00000517030 63 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 MIR3908-201ENST00000579798 126 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 SNORA25.5-201ENST00000363782 126 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 MIR4801-201ENST00000582704 82 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 AC062037.2-201ENST00000610137 73 ntBASIC-1.55□□□□□ -2.66
CACNA1AO00555 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 RNU6-907P-201ENST00000390924 102 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 MIR548F4-201ENST00000408515 105 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.56□□□□□ -2.66
CACNA1AO00555 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 RNU6-844P-201ENST00000517175 102 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 MIR548BB-201ENST00000626714 66 ntBASIC-1.56□□□□□ -2.66
CACNA1AO00555 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.57□□□□□ -2.66
CACNA1AO00555 RNU6-219P-201ENST00000364728 107 ntBASIC-1.57□□□□□ -2.66
CACNA1AO00555 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.57□□□□□ -2.66
CACNA1AO00555 RNU6-422P-201ENST00000384632 107 ntBASIC-1.57□□□□□ -2.66
CACNA1AO00555 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms