Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 MIR3123-201ENST00000583417 75 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 MIR548AM-201ENST00000584298 74 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 U2.7-201ENST00000619197 100 ntBASIC-1.84□□□□□ -2.7
BLOC1S4Q9NUP1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.85□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 MIR1468-201ENST00000410600 86 ntBASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.87□□□□□ -2.71
BLOC1S4Q9NUP1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR548C-201ENST00000384815 97 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR496-201ENST00000385226 102 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR1297-201ENST00000637311 77 ntBASIC-1.88□□□□□ -2.71
BLOC1S4Q9NUP1 MIR520D-201ENST00000385002 87 ntBASIC-1.89□□□□□ -2.71
BLOC1S4Q9NUP1 AL603908.1-201ENST00000406098 201 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 AC074348.1-201ENST00000426503 132 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 AL606753.1-201ENST00000427435 87 ntBASIC-1.9□□□□□ -2.71
BLOC1S4Q9NUP1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.91□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.91□□□□□ -2.72
BLOC1S4Q9NUP1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 MT-TM-201ENST00000387377 68 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.92□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 MIR548Q-201ENST00000408404 100 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 AC006160.2-201ENST00000637708 154 ntBASIC-1.93□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.94□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.94□□□□□ -2.72
BLOC1S4Q9NUP1 MIR429-201ENST00000362106 83 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 AC120024.2-201ENST00000576526 175 ntBASIC-1.95□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.96□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.97□□□□□ -2.72
BLOC1S4Q9NUP1 MIR488-201ENST00000365739 83 ntBASIC-1.98□□□□□ -2.73
BLOC1S4Q9NUP1 MIR548W-201ENST00000581970 74 ntBASIC-1.98□□□□□ -2.73
BLOC1S4Q9NUP1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.99□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.99□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-119P-201ENST00000364882 107 ntBASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 MTND4LP1-201ENST00000446263 157 ntBASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2□□□□□ -2.73
BLOC1S4Q9NUP1 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 MIR8053-201ENST00000613344 75 ntBASIC-2.02□□□□□ -2.73
BLOC1S4Q9NUP1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 SNORD20-201ENST00000384550 80 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 snoU13.10-201ENST00000459301 103 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 MIR4748-201ENST00000578076 82 ntBASIC-2.03□□□□□ -2.73
BLOC1S4Q9NUP1 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 AC013734.1-201ENST00000619329 111 ntBASIC-2.05□□□□□ -2.74
BLOC1S4Q9NUP1 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-315P-201ENST00000362666 107 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 MIR548AI-201ENST00000579940 88 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 IGLL4P-201ENST00000614590 133 ntBASIC-2.06□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-698P-201ENST00000363523 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-34P-201ENST00000364874 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-458P-201ENST00000384179 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 U6.58-201ENST00000613107 107 ntBASIC-2.07□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-982P-201ENST00000516216 102 ntBASIC-2.08□□□□□ -2.74
BLOC1S4Q9NUP1 MIR466-201ENST00000580653 84 ntBASIC-2.08□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-598P-201ENST00000364017 105 ntBASIC-2.09□□□□□ -2.74
BLOC1S4Q9NUP1 RNU6-696P-201ENST00000390834 107 ntBASIC-2.09□□□□□ -2.74
BLOC1S4Q9NUP1 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 MIR23C-201ENST00000579846 100 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 MIR4484-201ENST00000582855 83 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
BLOC1S4Q9NUP1 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNA5SP93-201ENST00000362525 114 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNA5SP215-201ENST00000363440 122 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNY1P1-201ENST00000364372 112 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 MIR1207-201ENST00000408249 87 ntBASIC-2.11□□□□□ -2.75
BLOC1S4Q9NUP1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms