Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.69□□□□□ -2.68
TREX1Q9NSU2 SNORD45.1-201ENST00000363181 77 ntBASIC-1.7□□□□□ -2.68
TREX1Q9NSU2 MIR581-201ENST00000384895 96 ntBASIC-1.7□□□□□ -2.68
TREX1Q9NSU2 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
TREX1Q9NSU2 RNU6-303P-201ENST00000517091 106 ntBASIC-1.7□□□□□ -2.68
TREX1Q9NSU2 RNY1P1-201ENST00000364372 112 ntBASIC-1.71□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.71□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.71□□□□□ -2.68
TREX1Q9NSU2 MIR496-201ENST00000385226 102 ntBASIC-1.71□□□□□ -2.68
TREX1Q9NSU2 AC074348.1-201ENST00000426503 132 ntBASIC-1.71□□□□□ -2.68
TREX1Q9NSU2 RNY4P9-201ENST00000363194 97 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 RNU6-974P-201ENST00000384099 108 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 MIR579-201ENST00000385221 98 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 RNY4P18-201ENST00000391107 89 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 MTND4LP1-201ENST00000446263 157 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 SNORD33.1-201ENST00000516213 88 ntBASIC-1.72□□□□□ -2.68
TREX1Q9NSU2 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 RNU6-257P-201ENST00000410238 98 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 MTATP8P2-201ENST00000435212 202 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 RNU6-162P-201ENST00000516228 103 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 RNU6-557P-201ENST00000516842 110 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 U7.3-201ENST00000616123 62 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 MIR3914-2-201ENST00000637339 95 ntBASIC-1.73□□□□□ -2.69
TREX1Q9NSU2 RNU6-633P-201ENST00000362612 103 ntBASIC-1.74□□□□□ -2.69
TREX1Q9NSU2 RNA5SP173-201ENST00000364857 136 ntBASIC-1.74□□□□□ -2.69
TREX1Q9NSU2 MIR548N-201ENST00000408742 75 ntBASIC-1.74□□□□□ -2.69
TREX1Q9NSU2 RNU6-172P-201ENST00000411000 93 ntBASIC-1.74□□□□□ -2.69
TREX1Q9NSU2 SNORD115-37-201ENST00000363768 82 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 RNU6-668P-201ENST00000364180 107 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 SNORD60-201ENST00000383903 83 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 RNU6-971P-201ENST00000516920 106 ntBASIC-1.75□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 RNU6-520P-201ENST00000384717 104 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 MIR590-201ENST00000385008 97 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 RNU6-129P-201ENST00000391022 107 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 U6.95-201ENST00000636931 70 ntBASIC-1.76□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.77□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.77□□□□□ -2.69
TREX1Q9NSU2 RNU6-141P-201ENST00000410499 105 ntBASIC-1.77□□□□□ -2.69
TREX1Q9NSU2 AC093729.1-201ENST00000513074 128 ntBASIC-1.77□□□□□ -2.69
TREX1Q9NSU2 MIR202-201ENST00000362219 110 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 SNORD113.1-201ENST00000363280 73 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 SNORD113-3-201ENST00000364830 72 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 RNU6-686P-201ENST00000364839 107 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 RNU6-886P-201ENST00000384319 105 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 SNORD54-201ENST00000459159 67 ntBASIC-1.78□□□□□ -2.69
TREX1Q9NSU2 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.79□□□□□ -2.7
TREX1Q9NSU2 RNU6-649P-201ENST00000384463 107 ntBASIC-1.79□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.79□□□□□ -2.7
TREX1Q9NSU2 RNU6-402P-201ENST00000410678 103 ntBASIC-1.79□□□□□ -2.7
TREX1Q9NSU2 MIR8053-201ENST00000613344 75 ntBASIC-1.79□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 MT-TG-201ENST00000387429 68 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 SNORA17.4-201ENST00000391287 132 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 RNU7-200P-201ENST00000516105 62 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 RNU6-659P-201ENST00000516454 104 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 RNU7-160P-201ENST00000516660 62 ntBASIC-1.8□□□□□ -2.7
TREX1Q9NSU2 RNU6-361P-201ENST00000364454 107 ntBASIC-1.81□□□□□ -2.7
TREX1Q9NSU2 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.81□□□□□ -2.7
TREX1Q9NSU2 MIR4668-201ENST00000582284 70 ntBASIC-1.81□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.81□□□□□ -2.7
TREX1Q9NSU2 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 RNU6-834P-201ENST00000362367 110 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 RNU6-106P-201ENST00000384405 107 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 RNU6-109P-201ENST00000516364 107 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 RNU6-184P-201ENST00000516514 107 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 MIR1297-201ENST00000637311 77 ntBASIC-1.82□□□□□ -2.7
TREX1Q9NSU2 RNU6-828P-201ENST00000364876 107 ntBASIC-1.83□□□□□ -2.7
TREX1Q9NSU2 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.83□□□□□ -2.7
TREX1Q9NSU2 RNU6-497P-201ENST00000365316 104 ntBASIC-1.83□□□□□ -2.7
TREX1Q9NSU2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.83□□□□□ -2.7
TREX1Q9NSU2 MIR379-201ENST00000362218 67 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 RNU6-755P-201ENST00000364400 103 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 SNORD45A-201ENST00000384512 84 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 MIR1302-5-201ENST00000408164 150 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 RNU6-68P-201ENST00000516576 104 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 MIR4484-201ENST00000582855 83 ntBASIC-1.84□□□□□ -2.7
TREX1Q9NSU2 SNORA63.4-201ENST00000362763 126 ntBASIC-1.85□□□□□ -2.71
TREX1Q9NSU2 RNU6-912P-201ENST00000363800 104 ntBASIC-1.85□□□□□ -2.71
TREX1Q9NSU2 SNORD116-21-201ENST00000384507 92 ntBASIC-1.85□□□□□ -2.71
TREX1Q9NSU2 RNU6-346P-201ENST00000516288 111 ntBASIC-1.86□□□□□ -2.71
TREX1Q9NSU2 RNU6-219P-201ENST00000364728 107 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.87□□□□□ -2.71
TREX1Q9NSU2 SNORA19-201ENST00000384737 128 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms