Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR1304-201ENST00000408243 91 ntBASIC0.73□□□□□ -2.29
KRTAP3-3Q9BYR6 MIR4421-201ENST00000578133 69 ntBASIC0.73□□□□□ -2.29
KRTAP3-3Q9BYR6 MIR502-201ENST00000606349 86 ntBASIC0.73□□□□□ -2.29
KRTAP3-3Q9BYR6 RNU1-42P-201ENST00000364033 160 ntBASIC0.72□□□□□ -2.29
KRTAP3-3Q9BYR6 MIR548H1-201ENST00000408610 102 ntBASIC0.72□□□□□ -2.29
KRTAP3-3Q9BYR6 MIR4435-1-201ENST00000582552 80 ntBASIC0.72□□□□□ -2.29
KRTAP3-3Q9BYR6 BX248123.2-201ENST00000606318 124 ntBASIC0.72□□□□□ -2.29
KRTAP3-3Q9BYR6 MIR7974-201ENST00000615835 79 ntBASIC0.72□□□□□ -2.29
KRTAP3-3Q9BYR6 SNORD49B-201ENST00000365172 72 ntBASIC0.71□□□□□ -2.3
KRTAP3-3Q9BYR6 UBE2DNL-203ENST00000474922 222 ntBASIC0.71□□□□□ -2.3
KRTAP3-3Q9BYR6 MIRLET7D-201ENST00000362263 87 ntBASIC0.7□□□□□ -2.3
KRTAP3-3Q9BYR6 MIR593-201ENST00000384856 100 ntBASIC0.7□□□□□ -2.3
KRTAP3-3Q9BYR6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
KRTAP3-3Q9BYR6 AC068338.1-201ENST00000565567 176 ntBASIC0.7□□□□□ -2.3
KRTAP3-3Q9BYR6 RNU6-854P-201ENST00000364036 107 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 RNU6-46P-201ENST00000383860 107 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 MIR204-201ENST00000385200 110 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 SNORA25.15-201ENST00000516487 89 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 RNU6-295P-201ENST00000516901 104 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 MIR4513-201ENST00000581077 86 ntBASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.69□□□□□ -2.3
KRTAP3-3Q9BYR6 SNORA70B-201ENST00000384210 135 ntBASIC0.68□□□□□ -2.3
KRTAP3-3Q9BYR6 RNU6-1034P-201ENST00000365335 101 ntBASIC0.67□□□□□ -2.3
KRTAP3-3Q9BYR6 MIR634-201ENST00000385208 97 ntBASIC0.67□□□□□ -2.3
KRTAP3-3Q9BYR6 SNORA31.24-201ENST00000517232 57 ntBASIC0.67□□□□□ -2.3
KRTAP3-3Q9BYR6 SNORA67.6-201ENST00000391093 99 ntBASIC0.66□□□□□ -2.3
KRTAP3-3Q9BYR6 SNORD53B-201ENST00000577887 78 ntBASIC0.66□□□□□ -2.3
KRTAP3-3Q9BYR6 MIR7843-201ENST00000622274 79 ntBASIC0.66□□□□□ -2.3
KRTAP3-3Q9BYR6 RNA5SP190-201ENST00000365222 118 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR150-201ENST00000385048 84 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 Z95118.1-201ENST00000421372 247 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 AL590491.3-201ENST00000610731 82 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.65□□□□□ -2.31
KRTAP3-3Q9BYR6 SNORD13-201ENST00000459299 104 ntBASIC0.64□□□□□ -2.31
KRTAP3-3Q9BYR6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
KRTAP3-3Q9BYR6 SNORD113-3-201ENST00000364830 72 ntBASIC0.63□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR145-201ENST00000384967 88 ntBASIC0.63□□□□□ -2.31
KRTAP3-3Q9BYR6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR1289-2-201ENST00000408360 111 ntBASIC0.62□□□□□ -2.31
KRTAP3-3Q9BYR6 AC108667.1-201ENST00000428618 249 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 snoU13.15-201ENST00000459407 104 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 SNORA62.5-201ENST00000516634 120 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR3660-201ENST00000584845 100 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR4315-1-201ENST00000636800 73 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR4315-2-201ENST00000640925 73 ntBASIC0.61□□□□□ -2.31
KRTAP3-3Q9BYR6 RNU6-164P-201ENST00000364604 103 ntBASIC0.6□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
KRTAP3-3Q9BYR6 RNU6-983P-201ENST00000516004 103 ntBASIC0.59□□□□□ -2.31
KRTAP3-3Q9BYR6 MIR4263-201ENST00000584745 83 ntBASIC0.59□□□□□ -2.31
KRTAP3-3Q9BYR6 RNU6-892P-201ENST00000410335 99 ntBASIC0.58□□□□□ -2.32
KRTAP3-3Q9BYR6 MIR6818-201ENST00000621576 65 ntBASIC0.58□□□□□ -2.32
KRTAP3-3Q9BYR6 MIR3945-201ENST00000581853 98 ntBASIC0.56□□□□□ -2.32
KRTAP3-3Q9BYR6 RNU1-17P-201ENST00000363022 152 ntBASIC0.55□□□□□ -2.32
KRTAP3-3Q9BYR6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.55□□□□□ -2.32
KRTAP3-3Q9BYR6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.55□□□□□ -2.32
KRTAP3-3Q9BYR6 SNORA11.2-201ENST00000408318 127 ntBASIC0.52□□□□□ -2.33
KRTAP3-3Q9BYR6 RNU7-95P-201ENST00000459222 64 ntBASIC0.52□□□□□ -2.33
KRTAP3-3Q9BYR6 RPL39P28-201ENST00000465655 155 ntBASIC0.52□□□□□ -2.33
KRTAP3-3Q9BYR6 SNORD114-21-201ENST00000606412 72 ntBASIC0.52□□□□□ -2.33
KRTAP3-3Q9BYR6 AC103810.9-201ENST00000606688 112 ntBASIC0.52□□□□□ -2.33
KRTAP3-3Q9BYR6 Y_RNA.63-201ENST00000362841 102 ntBASIC0.51□□□□□ -2.33
KRTAP3-3Q9BYR6 snoU13.10-201ENST00000459301 103 ntBASIC0.5□□□□□ -2.33
KRTAP3-3Q9BYR6 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.5□□□□□ -2.33
KRTAP3-3Q9BYR6 Y_RNA.449-201ENST00000384187 102 ntBASIC0.49□□□□□ -2.33
KRTAP3-3Q9BYR6 MIR147A-201ENST00000385079 72 ntBASIC0.49□□□□□ -2.33
KRTAP3-3Q9BYR6 MIR764-201ENST00000390811 85 ntBASIC0.49□□□□□ -2.33
KRTAP3-3Q9BYR6 AC104692.1-201ENST00000472406 90 ntBASIC0.49□□□□□ -2.33
KRTAP3-3Q9BYR6 RNA5SP214-201ENST00000363378 118 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RNU4-38P-201ENST00000364472 129 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RN7SL429P-201ENST00000479090 223 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RN7SL489P-201ENST00000486185 223 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RN7SL327P-201ENST00000488659 223 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RN7SL853P-201ENST00000617250 223 ntBASIC0.48□□□□□ -2.33
KRTAP3-3Q9BYR6 RNU6-400P-201ENST00000391173 106 ntBASIC0.47□□□□□ -2.33
KRTAP3-3Q9BYR6 MIR1261-201ENST00000408659 82 ntBASIC0.47□□□□□ -2.33
KRTAP3-3Q9BYR6 AP1B1P2-201ENST00000416196 106 ntBASIC0.47□□□□□ -2.33
KRTAP3-3Q9BYR6 AC021146.6-201ENST00000514659 117 ntBASIC0.47□□□□□ -2.33
KRTAP3-3Q9BYR6 MIR548W-201ENST00000581970 74 ntBASIC0.47□□□□□ -2.33
KRTAP3-3Q9BYR6 SNORD114-5-201ENST00000362928 70 ntBASIC0.46□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR4295-201ENST00000585286 85 ntBASIC0.46□□□□□ -2.34
KRTAP3-3Q9BYR6 SNORD114-26-201ENST00000363543 72 ntBASIC0.45□□□□□ -2.34
KRTAP3-3Q9BYR6 Y_RNA.484-201ENST00000384389 103 ntBASIC0.44□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR23A-201ENST00000385245 73 ntBASIC0.44□□□□□ -2.34
KRTAP3-3Q9BYR6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.44□□□□□ -2.34
KRTAP3-3Q9BYR6 RNU6-431P-201ENST00000383874 107 ntBASIC0.42□□□□□ -2.34
KRTAP3-3Q9BYR6 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.42□□□□□ -2.34
KRTAP3-3Q9BYR6 snoU13.23-201ENST00000458863 104 ntBASIC0.42□□□□□ -2.34
KRTAP3-3Q9BYR6 RNU6-351P-201ENST00000516097 100 ntBASIC0.42□□□□□ -2.34
KRTAP3-3Q9BYR6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.42□□□□□ -2.34
KRTAP3-3Q9BYR6 SNORD114-9-201ENST00000364370 72 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR532-201ENST00000385025 91 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR3123-201ENST00000583417 75 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR3666-201ENST00000607845 111 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 MIR6078-201ENST00000611069 100 ntBASIC0.41□□□□□ -2.34
KRTAP3-3Q9BYR6 SNORD114-2-201ENST00000363953 78 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 407.7 ms