Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.34□□□□□ -2.78
RPRD1AQ96P16 MALAT1.1-201ENST00000618249 95 ntBASIC-2.34□□□□□ -2.78
RPRD1AQ96P16 MIR520D-201ENST00000385002 87 ntBASIC-2.35□□□□□ -2.79
RPRD1AQ96P16 RNY4P27-201ENST00000363341 96 ntBASIC-2.36□□□□□ -2.79
RPRD1AQ96P16 MIR664B-201ENST00000626756 61 ntBASIC-2.37□□□□□ -2.79
RPRD1AQ96P16 RNU6-129P-201ENST00000391022 107 ntBASIC-2.38□□□□□ -2.79
RPRD1AQ96P16 MIR548V-201ENST00000584165 80 ntBASIC-2.38□□□□□ -2.79
RPRD1AQ96P16 AP001318.4-201ENST00000616637 121 ntBASIC-2.38□□□□□ -2.79
RPRD1AQ96P16 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.39□□□□□ -2.79
RPRD1AQ96P16 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.39□□□□□ -2.79
RPRD1AQ96P16 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 RNU6-695P-201ENST00000391157 104 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 SNORA40.13-201ENST00000516379 120 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 MIR4484-201ENST00000582855 83 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 U2.18-201ENST00000622185 84 ntBASIC-2.4□□□□□ -2.79
RPRD1AQ96P16 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.41□□□□□ -2.8
RPRD1AQ96P16 MTND4LP1-201ENST00000446263 157 ntBASIC-2.41□□□□□ -2.8
RPRD1AQ96P16 MIR630-201ENST00000384957 97 ntBASIC-2.43□□□□□ -2.8
RPRD1AQ96P16 RNU6-118P-201ENST00000516552 102 ntBASIC-2.43□□□□□ -2.8
RPRD1AQ96P16 MIR1297-201ENST00000637311 77 ntBASIC-2.43□□□□□ -2.8
RPRD1AQ96P16 RNU6-22P-201ENST00000384355 107 ntBASIC-2.44□□□□□ -2.8
RPRD1AQ96P16 RNU6-563P-201ENST00000364872 108 ntBASIC-2.45□□□□□ -2.8
RPRD1AQ96P16 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.45□□□□□ -2.8
RPRD1AQ96P16 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.46□□□□□ -2.8
RPRD1AQ96P16 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.46□□□□□ -2.8
RPRD1AQ96P16 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.46□□□□□ -2.8
RPRD1AQ96P16 RNA5SP215-201ENST00000363440 122 ntBASIC-2.47□□□□□ -2.8
RPRD1AQ96P16 SNORD113-2-201ENST00000391082 72 ntBASIC-2.47□□□□□ -2.8
RPRD1AQ96P16 AC120024.2-201ENST00000576526 175 ntBASIC-2.47□□□□□ -2.8
RPRD1AQ96P16 MIR3123-201ENST00000583417 75 ntBASIC-2.47□□□□□ -2.8
RPRD1AQ96P16 RNU6-668P-201ENST00000364180 107 ntBASIC-2.48□□□□□ -2.81
RPRD1AQ96P16 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.48□□□□□ -2.81
RPRD1AQ96P16 MIR23C-201ENST00000579846 100 ntBASIC-2.48□□□□□ -2.81
RPRD1AQ96P16 RNU6-675P-201ENST00000384236 104 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 SNORD116-16-201ENST00000384533 92 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 RNY4P18-201ENST00000391107 89 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 MIR3170-201ENST00000582699 77 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 MIR8053-201ENST00000613344 75 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 AC006160.2-201ENST00000637708 154 ntBASIC-2.49□□□□□ -2.81
RPRD1AQ96P16 SNORD113.1-201ENST00000363280 73 ntBASIC-2.5□□□□□ -2.81
RPRD1AQ96P16 MIR488-201ENST00000365739 83 ntBASIC-2.5□□□□□ -2.81
RPRD1AQ96P16 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.5□□□□□ -2.81
RPRD1AQ96P16 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.5□□□□□ -2.81
RPRD1AQ96P16 RNU6-980P-201ENST00000516925 103 ntBASIC-2.5□□□□□ -2.81
RPRD1AQ96P16 RNU6-841P-201ENST00000383872 107 ntBASIC-2.51□□□□□ -2.81
RPRD1AQ96P16 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.51□□□□□ -2.81
RPRD1AQ96P16 RNU6-380P-201ENST00000410207 107 ntBASIC-2.51□□□□□ -2.81
RPRD1AQ96P16 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.51□□□□□ -2.81
RPRD1AQ96P16 MIR548AA1-201ENST00000384971 97 ntBASIC-2.52□□□□□ -2.81
RPRD1AQ96P16 MIR3139-201ENST00000579145 76 ntBASIC-2.52□□□□□ -2.81
RPRD1AQ96P16 MIR548AM-201ENST00000584298 74 ntBASIC-2.52□□□□□ -2.81
RPRD1AQ96P16 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.53□□□□□ -2.81
RPRD1AQ96P16 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.53□□□□□ -2.81
RPRD1AQ96P16 RNA5SP405-201ENST00000363059 114 ntBASIC-2.54□□□□□ -2.82
RPRD1AQ96P16 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.54□□□□□ -2.82
RPRD1AQ96P16 SNORD45A-201ENST00000384512 84 ntBASIC-2.54□□□□□ -2.82
RPRD1AQ96P16 MIR496-201ENST00000385226 102 ntBASIC-2.54□□□□□ -2.82
RPRD1AQ96P16 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.54□□□□□ -2.82
RPRD1AQ96P16 RNA5SP173-201ENST00000364857 136 ntBASIC-2.55□□□□□ -2.82
RPRD1AQ96P16 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.55□□□□□ -2.82
RPRD1AQ96P16 RNU6-313P-201ENST00000516317 112 ntBASIC-2.55□□□□□ -2.82
RPRD1AQ96P16 RNU6-844P-201ENST00000517175 102 ntBASIC-2.55□□□□□ -2.82
RPRD1AQ96P16 RNU6-640P-201ENST00000363693 105 ntBASIC-2.56□□□□□ -2.82
RPRD1AQ96P16 SNORA41B-201ENST00000384785 128 ntBASIC-2.56□□□□□ -2.82
RPRD1AQ96P16 MIR664A-201ENST00000626086 82 ntBASIC-2.56□□□□□ -2.82
RPRD1AQ96P16 SNORD1B-201ENST00000363091 84 ntBASIC-2.57□□□□□ -2.82
RPRD1AQ96P16 RNU6-258P-201ENST00000390884 101 ntBASIC-2.57□□□□□ -2.82
RPRD1AQ96P16 SNORA63.4-201ENST00000362763 126 ntBASIC-2.58□□□□□ -2.82
RPRD1AQ96P16 RNU6-755P-201ENST00000364400 103 ntBASIC-2.58□□□□□ -2.82
RPRD1AQ96P16 MIR3668-201ENST00000582138 75 ntBASIC-2.58□□□□□ -2.82
RPRD1AQ96P16 RNU6-247P-201ENST00000362636 107 ntBASIC-2.59□□□□□ -2.82
RPRD1AQ96P16 RNU6-119P-201ENST00000364882 107 ntBASIC-2.59□□□□□ -2.82
RPRD1AQ96P16 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.59□□□□□ -2.82
RPRD1AQ96P16 RNU6-315P-201ENST00000362666 107 ntBASIC-2.6□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.6□□□□□ -2.83
RPRD1AQ96P16 RNU4-88P-201ENST00000411220 86 ntBASIC-2.6□□□□□ -2.83
RPRD1AQ96P16 RNU6-194P-201ENST00000363862 105 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 RNU6-32P-201ENST00000383948 107 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 RNU6-13P-201ENST00000384248 107 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 RNU6-12P-201ENST00000384604 107 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 RNU6-41P-201ENST00000384741 107 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.61□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.62□□□□□ -2.83
RPRD1AQ96P16 MT-TM-201ENST00000387377 68 ntBASIC-2.62□□□□□ -2.83
RPRD1AQ96P16 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.62□□□□□ -2.83
RPRD1AQ96P16 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.62□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.63□□□□□ -2.83
RPRD1AQ96P16 MIR3671-201ENST00000580455 88 ntBASIC-2.63□□□□□ -2.83
RPRD1AQ96P16 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.64□□□□□ -2.83
RPRD1AQ96P16 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.64□□□□□ -2.83
RPRD1AQ96P16 MIR548M-201ENST00000408260 86 ntBASIC-2.64□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.64□□□□□ -2.83
RPRD1AQ96P16 RNU6-995P-201ENST00000391244 107 ntBASIC-2.65□□□□□ -2.83
RPRD1AQ96P16 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.66□□□□□ -2.84
RPRD1AQ96P16 AC013734.1-201ENST00000619329 111 ntBASIC-2.66□□□□□ -2.84
RPRD1AQ96P16 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.67□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms